; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G007320 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G007320
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr04:3641490..3641894
RNA-Seq ExpressionCmoCh04G007320
SyntenyCmoCh04G007320
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600516.1 hypothetical protein SDJN03_05749, partial [Cucurbita argyrosperma subsp. sororia]2.4e-6099.25Show/hide
Query:  MISNLISSLNKKLQAVEISNRCRRTKKTTTTTTYVYRDDLNKKKQSPSSQQQPEIKKVKKRVRFAETEPVIIAIGAEEETEKKRVVRITVKVTKQEANRM
        MISNLISSLNKKLQAVEISNRCRRTKKTTTTTTYVYRDDLNKKKQSPSSQQQPEIKKVKKRVRFAETEPVIIAI AEEETEKKRVVRITVKVTKQEANRM
Subjt:  MISNLISSLNKKLQAVEISNRCRRTKKTTTTTTYVYRDDLNKKKQSPSSQQQPEIKKVKKRVRFAETEPVIIAIGAEEETEKKRVVRITVKVTKQEANRM

Query:  LSRCSEGGVLELGDAACELMRIPAARVRSSMVAN
        LSRCSEGGVLELGDAACELMRIPAARVRSSMVAN
Subjt:  LSRCSEGGVLELGDAACELMRIPAARVRSSMVAN

KAG7015140.1 hypothetical protein SDJN02_22773, partial [Cucurbita argyrosperma subsp. argyrosperma]5.3e-3976.43Show/hide
Query:  MISNLISSLNKKLQAVEISNRCRRTKKTTTTTTYVYRDDLNKKKQSP-SSQQQPEIKKVKKRVRFAETEPVIIAI-----GAEEETEKKRVVRITVKVTK
        MI NLISSLNKKLQAVEISNRCRRTKKTT     VYR D++KKKQ    SQ +PEI+KVKKRVRFA+TEPVIIAI       EEETEKK VVRITVK+TK
Subjt:  MISNLISSLNKKLQAVEISNRCRRTKKTTTTTTYVYRDDLNKKKQSP-SSQQQPEIKKVKKRVRFAETEPVIIAI-----GAEEETEKKRVVRITVKVTK

Query:  QEANRMLSRCSEGGVLELGDAACELMRIPAARVRSSMVAN
        QEANRMLSRCS+GGVLE  D A ELMRIPAARV SSMV N
Subjt:  QEANRMLSRCSEGGVLELGDAACELMRIPAARVRSSMVAN

XP_008451951.1 PREDICTED: uncharacterized protein LOC103493098 [Cucumis melo]8.1e-4075.86Show/hide
Query:  MISNLISSLNKKLQAVEISNRCRRTKKTTTTTTYVYRDDLNKKKQSP-----SSQQQP-EIKKVKKRVRFAETEPVIIAIGA-----EEETEKKRVVRIT
        MISNLISSLNKKLQAVEISNRC+RTKK    TTYVYRDDL KKK SP     S Q QP EIKKVKKRVRFA+TEPVIIAI       EEETEKK VVRIT
Subjt:  MISNLISSLNKKLQAVEISNRCRRTKKTTTTTTYVYRDDLNKKKQSP-----SSQQQP-EIKKVKKRVRFAETEPVIIAIGA-----EEETEKKRVVRIT

Query:  VKVTKQEANRMLSRCSEGGVLELGDAACELMRIPAARVRSSMVAN
        VK+TKQEANRMLSRCS  GVLE GD A EL+RIP  RV SS+VAN
Subjt:  VKVTKQEANRMLSRCSEGGVLELGDAACELMRIPAARVRSSMVAN

XP_022985430.1 uncharacterized protein LOC111483436 [Cucurbita maxima]3.1e-3978.42Show/hide
Query:  MISNLISSLNKKLQAVEISNRCRRTKKTTTTTTYVYRDDLNKKK--QSPS-SQQQPEIKKVKKRVRFAETEPVIIAI-----GAEEETEKKRVVRITVKV
        MI NLISSLNKKLQAVEISNRCRRTKKTT     VYR D++KKK  QSPS SQ +PEI+KVKKRVRFA+TEPVIIAI       EEETEKK VVRITVK+
Subjt:  MISNLISSLNKKLQAVEISNRCRRTKKTTTTTTYVYRDDLNKKK--QSPS-SQQQPEIKKVKKRVRFAETEPVIIAI-----GAEEETEKKRVVRITVKV

Query:  TKQEANRMLSRCSEGGVLELGDAACELMRIPAARVRSSM
        TKQEANRMLSRCS+GGVLE GD A ELMRIPAARV SSM
Subjt:  TKQEANRMLSRCSEGGVLELGDAACELMRIPAARVRSSM

XP_038906331.1 uncharacterized protein LOC120092170 [Benincasa hispida]8.4e-4580.42Show/hide
Query:  MISNLISSLNKKLQAVEISNRCRRTKKTTTTTTYVYRDDLNKKKQSP---SSQQQPEIKKVKKRVRFAETEPVIIAI------GAEEETEKKRVVRITVK
        MISN I SLNKKLQAVEISNRCRRTKK    TTYVYRDDL+KKKQSP   SSQ QPEIKKVKKRVRFA+TEPVIIAI        EEETEKK VVRITVK
Subjt:  MISNLISSLNKKLQAVEISNRCRRTKKTTTTTTYVYRDDLNKKKQSP---SSQQQPEIKKVKKRVRFAETEPVIIAI------GAEEETEKKRVVRITVK

Query:  VTKQEANRMLSRCSEGGVLELGDAACELMRIPAARVRSSMVAN
        +TK+EANRMLSRCS+GGVLE GD ACELMRIPA RV SSMVAN
Subjt:  VTKQEANRMLSRCSEGGVLELGDAACELMRIPAARVRSSMVAN

TrEMBL top hitse value%identityAlignment
A0A0A0KYE1 Uncharacterized protein4.4e-3971.92Show/hide
Query:  MISNLISSLNKKLQAVEISNRCRRTKKTTTTTTYVYRDDLNKKKQSP-----SSQQQP-EIKKVKKRVRFAETEPVIIAIGAEEETE------KKRVVRI
        MISNLISSLNKKLQAVEIS+RC+RTKK    T YVYRD+L KK  SP     S Q QP EIKKVKKRVRFA+TEPVIIAI  + E E      +K+VVRI
Subjt:  MISNLISSLNKKLQAVEISNRCRRTKKTTTTTTYVYRDDLNKKKQSP-----SSQQQP-EIKKVKKRVRFAETEPVIIAIGAEEETE------KKRVVRI

Query:  TVKVTKQEANRMLSRCSEGGVLELGDAACELMRIPAARVRSSMVAN
        TVK+TKQEANRMLSRCS GGVLE GD A ELMRIP  RVRSS+VAN
Subjt:  TVKVTKQEANRMLSRCSEGGVLELGDAACELMRIPAARVRSSMVAN

A0A1S3BS40 uncharacterized protein LOC1034930983.9e-4075.86Show/hide
Query:  MISNLISSLNKKLQAVEISNRCRRTKKTTTTTTYVYRDDLNKKKQSP-----SSQQQP-EIKKVKKRVRFAETEPVIIAIGA-----EEETEKKRVVRIT
        MISNLISSLNKKLQAVEISNRC+RTKK    TTYVYRDDL KKK SP     S Q QP EIKKVKKRVRFA+TEPVIIAI       EEETEKK VVRIT
Subjt:  MISNLISSLNKKLQAVEISNRCRRTKKTTTTTTYVYRDDLNKKKQSP-----SSQQQP-EIKKVKKRVRFAETEPVIIAIGA-----EEETEKKRVVRIT

Query:  VKVTKQEANRMLSRCSEGGVLELGDAACELMRIPAARVRSSMVAN
        VK+TKQEANRMLSRCS  GVLE GD A EL+RIP  RV SS+VAN
Subjt:  VKVTKQEANRMLSRCSEGGVLELGDAACELMRIPAARVRSSMVAN

A0A5D3D246 Uncharacterized protein3.9e-4075.86Show/hide
Query:  MISNLISSLNKKLQAVEISNRCRRTKKTTTTTTYVYRDDLNKKKQSP-----SSQQQP-EIKKVKKRVRFAETEPVIIAIGA-----EEETEKKRVVRIT
        MISNLISSLNKKLQAVEISNRC+RTKK    TTYVYRDDL KKK SP     S Q QP EIKKVKKRVRFA+TEPVIIAI       EEETEKK VVRIT
Subjt:  MISNLISSLNKKLQAVEISNRCRRTKKTTTTTTYVYRDDLNKKKQSP-----SSQQQP-EIKKVKKRVRFAETEPVIIAIGA-----EEETEKKRVVRIT

Query:  VKVTKQEANRMLSRCSEGGVLELGDAACELMRIPAARVRSSMVAN
        VK+TKQEANRMLSRCS  GVLE GD A EL+RIP  RV SS+VAN
Subjt:  VKVTKQEANRMLSRCSEGGVLELGDAACELMRIPAARVRSSMVAN

A0A6J1EU86 uncharacterized protein LOC1114376084.4e-3977.37Show/hide
Query:  MISNLISSLNKKLQAVEISNRCRRTKKTTTTTTYVYRDDLNKKKQSP-SSQQQPEIKKVKKRVRFAETEPVIIAI-----GAEEETEKKRVVRITVKVTK
        MI NLISSLNKKLQAVEISNRCRRTKKTT     VYR D++KKKQ    SQ +PEI+KVKKRVRFA+TEPVIIAI       EEETEKK VVRITVK+TK
Subjt:  MISNLISSLNKKLQAVEISNRCRRTKKTTTTTTYVYRDDLNKKKQSP-SSQQQPEIKKVKKRVRFAETEPVIIAI-----GAEEETEKKRVVRITVKVTK

Query:  QEANRMLSRCSEGGVLELGDAACELMRIPAARVRSSM
        QEANRMLSRCS+GGVLE GD A ELMRIPAARV SSM
Subjt:  QEANRMLSRCSEGGVLELGDAACELMRIPAARVRSSM

A0A6J1JBA8 uncharacterized protein LOC1114834361.5e-3978.42Show/hide
Query:  MISNLISSLNKKLQAVEISNRCRRTKKTTTTTTYVYRDDLNKKK--QSPS-SQQQPEIKKVKKRVRFAETEPVIIAI-----GAEEETEKKRVVRITVKV
        MI NLISSLNKKLQAVEISNRCRRTKKTT     VYR D++KKK  QSPS SQ +PEI+KVKKRVRFA+TEPVIIAI       EEETEKK VVRITVK+
Subjt:  MISNLISSLNKKLQAVEISNRCRRTKKTTTTTTYVYRDDLNKKK--QSPS-SQQQPEIKKVKKRVRFAETEPVIIAI-----GAEEETEKKRVVRITVKV

Query:  TKQEANRMLSRCSEGGVLELGDAACELMRIPAARVRSSM
        TKQEANRMLSRCS+GGVLE GD A ELMRIPAARV SSM
Subjt:  TKQEANRMLSRCSEGGVLELGDAACELMRIPAARVRSSM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCAGCAACTTGATTTCAAGCTTGAACAAAAAATTGCAGGCGGTTGAAATCAGCAATCGCTGCAGACGAACGAAGAAGACGACGACGACGACGACGTACGTTTACAG
AGACGATCTGAACAAGAAGAAGCAGTCGCCGTCGTCGCAGCAGCAACCGGAAATCAAGAAAGTGAAGAAGAGAGTGAGATTTGCAGAGACGGAGCCGGTGATAATCGCCA
TCGGTGCAGAGGAGGAAACAGAGAAGAAGAGAGTGGTGAGAATAACGGTGAAAGTAACGAAGCAAGAAGCGAATCGGATGCTATCGAGGTGCTCCGAAGGCGGCGTTCTG
GAACTCGGAGATGCGGCTTGTGAGCTCATGCGGATTCCTGCGGCTCGAGTTAGGTCTTCTATGGTGGCCAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGATCAGCAACTTGATTTCAAGCTTGAACAAAAAATTGCAGGCGGTTGAAATCAGCAATCGCTGCAGACGAACGAAGAAGACGACGACGACGACGACGTACGTTTACAG
AGACGATCTGAACAAGAAGAAGCAGTCGCCGTCGTCGCAGCAGCAACCGGAAATCAAGAAAGTGAAGAAGAGAGTGAGATTTGCAGAGACGGAGCCGGTGATAATCGCCA
TCGGTGCAGAGGAGGAAACAGAGAAGAAGAGAGTGGTGAGAATAACGGTGAAAGTAACGAAGCAAGAAGCGAATCGGATGCTATCGAGGTGCTCCGAAGGCGGCGTTCTG
GAACTCGGAGATGCGGCTTGTGAGCTCATGCGGATTCCTGCGGCTCGAGTTAGGTCTTCTATGGTGGCCAATTGA
Protein sequenceShow/hide protein sequence
MISNLISSLNKKLQAVEISNRCRRTKKTTTTTTYVYRDDLNKKKQSPSSQQQPEIKKVKKRVRFAETEPVIIAIGAEEETEKKRVVRITVKVTKQEANRMLSRCSEGGVL
ELGDAACELMRIPAARVRSSMVAN