; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G007690 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G007690
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
Genome locationCmo_Chr04:3851652..3854634
RNA-Seq ExpressionCmoCh04G007690
SyntenyCmoCh04G007690
Gene Ontology termsGO:0015995 - chlorophyll biosynthetic process (biological process)
GO:0016117 - carotenoid biosynthetic process (biological process)
GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (biological process)
GO:0008685 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR003526 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
IPR020555 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site
IPR036571 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600551.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.4e-12499.15Show/hide
Query:  MAVPFPVFASATTATTSHQSLSLSVYPRSFPRTNFNVVSSSSSRPSIRVNSAASPSVEAATAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLIIG
        MAVPFPVFASATTATTSHQSLSLSVYPRSFPRTNFNVVSSSSSRPSIRVNSAASPSVEAATAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLIIG
Subjt:  MAVPFPVFASATTATTSHQSLSLSVYPRSFPRTNFNVVSSSSSRPSIRVNSAASPSVEAATAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLIIG

Query:  GINIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQRPKLSPHKEAIRANLSDLLG
        GINIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQRPKLSPHKEAIRANLS+LLG
Subjt:  GINIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQRPKLSPHKEAIRANLSDLLG

Query:  ADQSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
        AD SVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
Subjt:  ADQSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR

XP_022136770.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic [Momordica charantia]1.8e-10385.29Show/hide
Query:  MAVPFPVFASATT--ATTSHQSLSLSVYPRSFPRTNFNVVSSSSSRPSIRVNSAASPSVEAATAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLI
        MAVP P FAS  T  AT SHQSLSLS++PR+FPR  F  +SSSSS P+IRV SAA  + E  TA+ S  AAASDSRSKALPFR+GHGFDLHRLEPGYPLI
Subjt:  MAVPFPVFASATT--ATTSHQSLSLSVYPRSFPRTNFNVVSSSSSRPSIRVNSAASPSVEAATAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLI

Query:  IGGINIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQRPKLSPHKEAIRANLSDL
        IGGINIPH+RGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGY+IGNLDATLILQRPKLSPHKEAIR NLS+L
Subjt:  IGGINIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQRPKLSPHKEAIRANLSDL

Query:  LGADQSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
        LGAD  VVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
Subjt:  LGADQSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR

XP_022942995.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic [Cucurbita moschata]7.7e-126100Show/hide
Query:  MAVPFPVFASATTATTSHQSLSLSVYPRSFPRTNFNVVSSSSSRPSIRVNSAASPSVEAATAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLIIG
        MAVPFPVFASATTATTSHQSLSLSVYPRSFPRTNFNVVSSSSSRPSIRVNSAASPSVEAATAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLIIG
Subjt:  MAVPFPVFASATTATTSHQSLSLSVYPRSFPRTNFNVVSSSSSRPSIRVNSAASPSVEAATAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLIIG

Query:  GINIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQRPKLSPHKEAIRANLSDLLG
        GINIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQRPKLSPHKEAIRANLSDLLG
Subjt:  GINIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQRPKLSPHKEAIRANLSDLLG

Query:  ADQSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
        ADQSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
Subjt:  ADQSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR

XP_022982530.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic [Cucurbita maxima]8.5e-12598.73Show/hide
Query:  MAVPFPVFASATTATTSHQSLSLSVYPRSFPRTNFNVVSSSSSRPSIRVNSAASPSVEAATAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLIIG
        MAVPFP+FASATTATTSHQSLSLSVYPRSFPRTNFNVVSSSSSRPSIRVNSAASPSV+AATAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLIIG
Subjt:  MAVPFPVFASATTATTSHQSLSLSVYPRSFPRTNFNVVSSSSSRPSIRVNSAASPSVEAATAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLIIG

Query:  GINIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQRPKLSPHKEAIRANLSDLLG
        GINIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQRPKLSPHKEAIRANLS+LLG
Subjt:  GINIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQRPKLSPHKEAIRANLSDLLG

Query:  ADQSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
        ADQSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
Subjt:  ADQSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR

XP_023548820.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic-like [Cucurbita pepo subsp. pepo]8.5e-12599.15Show/hide
Query:  MAVPFPVFASATTATTSHQSLSLSVYPRSFPRTNFNVVSSSSSRPSIRVNSAASPSVEAATAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLIIG
        MAVPFPVFASATTATTSHQSLSLSVYPRSFPRTNFNVVSSSSSRPSIRVNSAASPSVEAATAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLIIG
Subjt:  MAVPFPVFASATTATTSHQSLSLSVYPRSFPRTNFNVVSSSSSRPSIRVNSAASPSVEAATAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLIIG

Query:  GINIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQRPKLSPHKEAIRANLSDLLG
        GINIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMH+AGYEIGNLDATLILQRPKLSPHKEAIRANLSDLLG
Subjt:  GINIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQRPKLSPHKEAIRANLSDLLG

Query:  ADQSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
        AD SVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
Subjt:  ADQSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR

TrEMBL top hitse value%identityAlignment
A0A1S3BTZ8 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase3.4e-10384.75Show/hide
Query:  MAVPFPVFASATTATTSHQSLSLSVYPRSFPRTNFNVVSSSSSRPSIRVNSAASPSVEAATAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLIIG
        MAV  P FAS   ATTSHQS SLS YP SFPR  F  +SSSSS PS RVNSA S SV + TA++      SDS SK LPFR+GHGFDLHRLEPGYPLIIG
Subjt:  MAVPFPVFASATTATTSHQSLSLSVYPRSFPRTNFNVVSSSSSRPSIRVNSAASPSVEAATAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLIIG

Query:  GINIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQRPKLSPHKEAIRANLSDLLG
        GI+IPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGY+IGNLDATLILQRPKLSPHKEAIRANLS+LLG
Subjt:  GINIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQRPKLSPHKEAIRANLSDLLG

Query:  ADQSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
        AD SVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
Subjt:  ADQSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR

A0A5D3D287 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase3.4e-10384.75Show/hide
Query:  MAVPFPVFASATTATTSHQSLSLSVYPRSFPRTNFNVVSSSSSRPSIRVNSAASPSVEAATAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLIIG
        MAV  P FAS   ATTSHQS SLS YP SFPR  F  +SSSSS PS RVNSA S SV + TA++      SDS SK LPFR+GHGFDLHRLEPGYPLIIG
Subjt:  MAVPFPVFASATTATTSHQSLSLSVYPRSFPRTNFNVVSSSSSRPSIRVNSAASPSVEAATAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLIIG

Query:  GINIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQRPKLSPHKEAIRANLSDLLG
        GI+IPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGY+IGNLDATLILQRPKLSPHKEAIRANLS+LLG
Subjt:  GINIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQRPKLSPHKEAIRANLSDLLG

Query:  ADQSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
        AD SVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
Subjt:  ADQSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR

A0A6J1C4W9 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase8.9e-10485.29Show/hide
Query:  MAVPFPVFASATT--ATTSHQSLSLSVYPRSFPRTNFNVVSSSSSRPSIRVNSAASPSVEAATAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLI
        MAVP P FAS  T  AT SHQSLSLS++PR+FPR  F  +SSSSS P+IRV SAA  + E  TA+ S  AAASDSRSKALPFR+GHGFDLHRLEPGYPLI
Subjt:  MAVPFPVFASATT--ATTSHQSLSLSVYPRSFPRTNFNVVSSSSSRPSIRVNSAASPSVEAATAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLI

Query:  IGGINIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQRPKLSPHKEAIRANLSDL
        IGGINIPH+RGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGY+IGNLDATLILQRPKLSPHKEAIR NLS+L
Subjt:  IGGINIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQRPKLSPHKEAIRANLSDL

Query:  LGADQSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
        LGAD  VVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
Subjt:  LGADQSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR

A0A6J1FX89 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase3.7e-126100Show/hide
Query:  MAVPFPVFASATTATTSHQSLSLSVYPRSFPRTNFNVVSSSSSRPSIRVNSAASPSVEAATAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLIIG
        MAVPFPVFASATTATTSHQSLSLSVYPRSFPRTNFNVVSSSSSRPSIRVNSAASPSVEAATAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLIIG
Subjt:  MAVPFPVFASATTATTSHQSLSLSVYPRSFPRTNFNVVSSSSSRPSIRVNSAASPSVEAATAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLIIG

Query:  GINIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQRPKLSPHKEAIRANLSDLLG
        GINIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQRPKLSPHKEAIRANLSDLLG
Subjt:  GINIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQRPKLSPHKEAIRANLSDLLG

Query:  ADQSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
        ADQSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
Subjt:  ADQSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR

A0A6J1J2X8 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase4.1e-12598.73Show/hide
Query:  MAVPFPVFASATTATTSHQSLSLSVYPRSFPRTNFNVVSSSSSRPSIRVNSAASPSVEAATAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLIIG
        MAVPFP+FASATTATTSHQSLSLSVYPRSFPRTNFNVVSSSSSRPSIRVNSAASPSV+AATAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLIIG
Subjt:  MAVPFPVFASATTATTSHQSLSLSVYPRSFPRTNFNVVSSSSSRPSIRVNSAASPSVEAATAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLIIG

Query:  GINIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQRPKLSPHKEAIRANLSDLLG
        GINIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQRPKLSPHKEAIRANLS+LLG
Subjt:  GINIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQRPKLSPHKEAIRANLSDLLG

Query:  ADQSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
        ADQSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
Subjt:  ADQSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR

SwissProt top hitse value%identityAlignment
B8GQ78 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase1.7e-4352.29Show/hide
Query:  RIGHGFDLHRLEPGYPLIIGGINIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQ
        RIGHG+D+H  + G  +++GG+ IPH +   AHSDGDVL+H + DA+LGA  L DIG+ FPD+DP +KGA S V ++  V L+HE GY +GN+DAT+I Q
Subjt:  RIGHGFDLHRLEPGYPLIIGGINIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQ

Query:  RPKLSPHKEAIRANLSDLLGADQSVVNLKAKTHEKVDSLGENRSIAAHTVVLL
         PK++PH EA+RANL+D LG     VN+KA T E++   G    IAAH V L+
Subjt:  RPKLSPHKEAIRANLSDLLGADQSVVNLKAKTHEKVDSLGENRSIAAHTVVLL

Q1LLZ4 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase1.3e-4354.49Show/hide
Query:  RIGHGFDLHRLEPGYPLIIGGINIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQ
        RIG G+D+H L PG  LI+GG++IPHDRG   HSD D LLH V DA+ GA  L DIG+ FPD+DP + GA S V ++EAVR + EAGYEIGN+DAT+I Q
Subjt:  RIGHGFDLHRLEPGYPLIIGGINIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQ

Query:  RPKLSPHKEAIRANLSDLLGADQSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
        +PKL+PH   + ANL++ LG   +  N+KAKT+EK+   G+   I A   VL+ RR
Subjt:  RPKLSPHKEAIRANLSDLLGADQSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR

Q6EPN6 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic1.3e-8378Show/hide
Query:  SSSSSRPSIRVNSAASPSVEAATAVDSDR--AAASDSRSKALPFRIGHGFDLHRLEPGYPLIIGGINIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDI
        S+S +RPS+R+     PS  AA AV ++   A A+  +  ALPFR+GHGFDLHRLEPG PLIIGGI+IPHDRGC+AHSDGDVLLHCVVDAILGALGLPDI
Subjt:  SSSSSRPSIRVNSAASPSVEAATAVDSDR--AAASDSRSKALPFRIGHGFDLHRLEPGYPLIIGGINIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDI

Query:  GQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQRPKLSPHKEAIRANLSDLLGADQSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
        GQIFPDSDP+WKGA SSVF++EAV+LMHEAGYE+GNLDATLILQ+PK+SP KE IR+NL DLLGAD SVVNLKAKTHEKVDSLGENRSIAAHTVVLLMR+
Subjt:  GQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQRPKLSPHKEAIRANLSDLLGADQSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR

Q9CAK8 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic8.1e-8681.73Show/hide
Query:  SSSSRPSIRVNSAASPSVEAATAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLIIGGINIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQI
        S S RPS  V++A+S       AVD + +  S+  +K LPFRIGHGFDLHRLEPGYPLIIGGI IPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQI
Subjt:  SSSSRPSIRVNSAASPSVEAATAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLIIGGINIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQI

Query:  FPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQRPKLSPHKEAIRANLSDLLGADQSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
        FPDSDPKWKGA SSVFIKEAVRLM EAGYEIGNLDATLILQRPK+SPHKE IR+NLS LLGAD SVVNLKAKTHEKVDSLGENRSIAAHTV+LLM++
Subjt:  FPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQRPKLSPHKEAIRANLSDLLGADQSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR

Q9M4W3 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic6.4e-8370.82Show/hide
Query:  ATTSHQSLSLSVYPRSFPRTNF--NVVSSSSSRPS-IRVNSAASPSVE-------AATAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLIIGGIN
        AT+ + S ++     +  R NF  + V  S + PS IR+++  S ++        +  AV+++   A+ + SK L FR+GHGFDLHRLEPGYPLIIGGIN
Subjt:  ATTSHQSLSLSVYPRSFPRTNF--NVVSSSSSRPS-IRVNSAASPSVE-------AATAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLIIGGIN

Query:  IPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQRPKLSPHKEAIRANLSDLLGADQ
        IPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPD+DPKWKGAPSSVFIKEAVRLM EAGYE+GNLDATLILQRPK+SPHKEAIR NL  LLGAD 
Subjt:  IPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQRPKLSPHKEAIRANLSDLLGADQ

Query:  SVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
         VVNLKAKTHEKVDSLGENRSIAAHTVVLLMR+
Subjt:  SVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR

Arabidopsis top hitse value%identityAlignment
AT1G63970.1 isoprenoid F5.7e-8781.73Show/hide
Query:  SSSSRPSIRVNSAASPSVEAATAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLIIGGINIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQI
        S S RPS  V++A+S       AVD + +  S+  +K LPFRIGHGFDLHRLEPGYPLIIGGI IPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQI
Subjt:  SSSSRPSIRVNSAASPSVEAATAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLIIGGINIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQI

Query:  FPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQRPKLSPHKEAIRANLSDLLGADQSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
        FPDSDPKWKGA SSVFIKEAVRLM EAGYEIGNLDATLILQRPK+SPHKE IR+NLS LLGAD SVVNLKAKTHEKVDSLGENRSIAAHTV+LLM++
Subjt:  FPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQRPKLSPHKEAIRANLSDLLGADQSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR

AT1G63970.2 isoprenoid F1.5e-7977.66Show/hide
Query:  SSSSRPSIRVNSAASPSVEAATAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLIIGGINIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQI
        S S RPS  V++A+S       AVD + +  S+  +K LPFRIGHGFDLHRLEPGYPLIIGGI IPHDRGCEAHSD        VDAILGALGLPDIGQI
Subjt:  SSSSRPSIRVNSAASPSVEAATAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLIIGGINIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQI

Query:  FPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQRPKLSPHKEAIRANLSDLLGADQSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
        FPDSDPKWKGA SSVFIKEAVRLM EAGYEIGNLDATLILQRPK+SPHKE IR+NLS LLGAD SVVNLKAKTHEKVDSLGENRSIAAHTV+LLM++
Subjt:  FPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQRPKLSPHKEAIRANLSDLLGADQSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGTCCCCTTCCCGGTCTTCGCTTCTGCCACCACCGCCACAACCTCCCACCAATCCCTTTCTCTTTCCGTCTACCCCCGCTCCTTCCCCAGAACAAATTTCAATGT
TGTTTCCTCCTCCTCTTCGCGCCCTTCCATCCGTGTGAATTCTGCCGCTTCTCCCTCTGTGGAGGCGGCCACCGCCGTCGACTCTGATCGGGCTGCCGCCTCAGATTCTC
GGTCTAAAGCCTTGCCGTTTCGGATTGGACATGGGTTCGATCTCCATAGGTTGGAGCCTGGGTATCCTTTGATTATTGGGGGAATTAATATTCCCCATGACAGAGGCTGC
GAGGCTCATTCTGATGGGGATGTTCTACTTCACTGTGTGGTTGATGCAATTTTGGGTGCTTTGGGGCTTCCTGATATTGGACAAATCTTTCCAGATTCAGATCCCAAATG
GAAGGGTGCCCCTTCATCTGTTTTCATTAAAGAAGCTGTGAGACTGATGCATGAGGCAGGTTATGAGATAGGAAACTTGGATGCCACATTGATACTCCAAAGACCAAAGC
TTAGCCCTCACAAGGAAGCTATCAGAGCAAACCTCTCCGATCTTCTGGGAGCCGACCAATCTGTCGTGAATCTGAAGGCAAAAACACACGAGAAGGTCGACAGCCTCGGC
GAAAACCGAAGCATTGCTGCCCATACGGTGGTCCTCCTAATGAGGAGATAG
mRNA sequenceShow/hide mRNA sequence
GTCATGCCCACCCCCAAGCGGCTCGGTTCCTACGCACCCTTTTCTCCGCCACCAACACAAGTCAACCACACAACCCACTCCACTCACCTCTTCGCTTACCCTTTCCATGG
CTGTCCCCTTCCCGGTCTTCGCTTCTGCCACCACCGCCACAACCTCCCACCAATCCCTTTCTCTTTCCGTCTACCCCCGCTCCTTCCCCAGAACAAATTTCAATGTTGTT
TCCTCCTCCTCTTCGCGCCCTTCCATCCGTGTGAATTCTGCCGCTTCTCCCTCTGTGGAGGCGGCCACCGCCGTCGACTCTGATCGGGCTGCCGCCTCAGATTCTCGGTC
TAAAGCCTTGCCGTTTCGGATTGGACATGGGTTCGATCTCCATAGGTTGGAGCCTGGGTATCCTTTGATTATTGGGGGAATTAATATTCCCCATGACAGAGGCTGCGAGG
CTCATTCTGATGGGGATGTTCTACTTCACTGTGTGGTTGATGCAATTTTGGGTGCTTTGGGGCTTCCTGATATTGGACAAATCTTTCCAGATTCAGATCCCAAATGGAAG
GGTGCCCCTTCATCTGTTTTCATTAAAGAAGCTGTGAGACTGATGCATGAGGCAGGTTATGAGATAGGAAACTTGGATGCCACATTGATACTCCAAAGACCAAAGCTTAG
CCCTCACAAGGAAGCTATCAGAGCAAACCTCTCCGATCTTCTGGGAGCCGACCAATCTGTCGTGAATCTGAAGGCAAAAACACACGAGAAGGTCGACAGCCTCGGCGAAA
ACCGAAGCATTGCTGCCCATACGGTGGTCCTCCTAATGAGGAGATAGAACCCCTACCATTACTGCTGCTGCTTTGTTAGTGTAATAGCAACAACACTGCTCCATTTCAAG
TGGAATCTGCTTTAGTGTCAATACTTTGAATCTCCCCTCCCTTCCACAGCTAAAACGTTTTAATCATTCAACAACGTTAAAATGAAAATGATATGGTCAAGAACATTAGA
AATTGGCTACAATGACTTTTTTTTTTTTTTTCTTCTTCTTCTTCTTGGTGTGTGAAAGATGTAAAGATGAGGTGGAAATTACTCTTTCATTTTGTCAAAAGCCAGTAATC
ATTAATTATATTTGAGTCGAATTGTGTACAATTTGATCATATTGTAATTATACAATTTGACCATATTGTAATTAACAAAACCAAAGGATGCTATAAAATTAGAGATGTTT
ACCGG
Protein sequenceShow/hide protein sequence
MAVPFPVFASATTATTSHQSLSLSVYPRSFPRTNFNVVSSSSSRPSIRVNSAASPSVEAATAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLIIGGINIPHDRGC
EAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQRPKLSPHKEAIRANLSDLLGADQSVVNLKAKTHEKVDSLG
ENRSIAAHTVVLLMRR