; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G007910 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G007910
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionSAP30_Sin3_bdg domain-containing protein
Genome locationCmo_Chr04:3953402..3955854
RNA-Seq ExpressionCmoCh04G007910
SyntenyCmoCh04G007910
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0000118 - histone deacetylase complex (cellular component)
GO:0003712 - transcription coregulator activity (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR024145 - Histone deacetylase complex subunit SAP30/SAP30-like
IPR025718 - Histone deacetylase complex subunit SAP30, Sin3 binding domain
IPR038291 - SAP30, C-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146519.1 uncharacterized protein LOC101209634 [Cucumis sativus]8.9e-10889.69Show/hide
Query:  MLEPEFCASRIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNKNDDHDLDNSSC
        M+EPEFCAS IQSPFREES DEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGN+ND+HDLDNSSC
Subjt:  MLEPEFCASRIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNKNDDHDLDNSSC

Query:  SSDMGEKDNDLSSSIVFHKISKQRVRQIRPWAPSSSAKPTGRGSCGEIQSIHMPKLVTRVKLGKLGTESLWRYIRHFNLVNSISNASRDQILHVVQRHFA
        SSD+GEKDND SSS+VFHK+SK +VRQI+PWAPSSSAK T RGS GEIQSIHMPK  TRV+LGKLGTESLWRYI+HFNLVNSISN SRDQIL VVQRHFA
Subjt:  SSDMGEKDNDLSSSIVFHKISKQRVRQIRPWAPSSSAKPTGRGSCGEIQSIHMPKLVTRVKLGKLGTESLWRYIRHFNLVNSISNASRDQILHVVQRHFA

Query:  LQTSLNEASVMTEFIRTVKRRRE
        LQTSLNEASVMTEFIR VK+RRE
Subjt:  LQTSLNEASVMTEFIRTVKRRRE

XP_022136865.1 uncharacterized protein LOC111008453 isoform X4 [Momordica charantia]2.3e-10891.52Show/hide
Query:  MLEPEFCASRIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNKNDDHDLDNSSC
        M+EPEFC+SRIQSPFREES DEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGN+NDDHD DNSSC
Subjt:  MLEPEFCASRIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNKNDDHDLDNSSC

Query:  SSDMGEKDNDLSSSIVFHKISKQRVRQIRPWAPSSSAK-PTGRGSCGEIQSIHMPKLVTRVKLGKLGTESLWRYIRHFNLVNSISNASRDQILHVVQRHF
        SSD+GEKDND SSSIVFHK+SK +VRQIRPWAPSSSAK  TGRGS GEIQSIH+PKL  RVKLGKLGTESLWRYIRHFNLVNSISNASRDQ+LHVVQRHF
Subjt:  SSDMGEKDNDLSSSIVFHKISKQRVRQIRPWAPSSSAK-PTGRGSCGEIQSIHMPKLVTRVKLGKLGTESLWRYIRHFNLVNSISNASRDQILHVVQRHF

Query:  ALQTSLNEASVMTEFIRTVKRRRE
        ALQT+LNEASVMTEFIR VKRRRE
Subjt:  ALQTSLNEASVMTEFIRTVKRRRE

XP_022943250.1 uncharacterized protein LOC111448038 [Cucurbita moschata]3.2e-121100Show/hide
Query:  MLEPEFCASRIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNKNDDHDLDNSSC
        MLEPEFCASRIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNKNDDHDLDNSSC
Subjt:  MLEPEFCASRIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNKNDDHDLDNSSC

Query:  SSDMGEKDNDLSSSIVFHKISKQRVRQIRPWAPSSSAKPTGRGSCGEIQSIHMPKLVTRVKLGKLGTESLWRYIRHFNLVNSISNASRDQILHVVQRHFA
        SSDMGEKDNDLSSSIVFHKISKQRVRQIRPWAPSSSAKPTGRGSCGEIQSIHMPKLVTRVKLGKLGTESLWRYIRHFNLVNSISNASRDQILHVVQRHFA
Subjt:  SSDMGEKDNDLSSSIVFHKISKQRVRQIRPWAPSSSAKPTGRGSCGEIQSIHMPKLVTRVKLGKLGTESLWRYIRHFNLVNSISNASRDQILHVVQRHFA

Query:  LQTSLNEASVMTEFIRTVKRRRE
        LQTSLNEASVMTEFIRTVKRRRE
Subjt:  LQTSLNEASVMTEFIRTVKRRRE

XP_022982598.1 uncharacterized protein LOC111481424 [Cucurbita maxima]3.5e-12098.65Show/hide
Query:  MLEPEFCASRIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNKNDDHDLDNSSC
        MLEPEFCASRIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNKNDDHDLDNSSC
Subjt:  MLEPEFCASRIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNKNDDHDLDNSSC

Query:  SSDMGEKDNDLSSSIVFHKISKQRVRQIRPWAPSSSAKPTGRGSCGEIQSIHMPKLVTRVKLGKLGTESLWRYIRHFNLVNSISNASRDQILHVVQRHFA
        SSDMGEKDNDLSSSIVFHK+SKQ+VRQIRPWAPSSSAKPTGRGSCGEIQS HMPKLVTRVKLGKLGTESLWRYIRHFNLVNSISNASRDQILHVVQRHFA
Subjt:  SSDMGEKDNDLSSSIVFHKISKQRVRQIRPWAPSSSAKPTGRGSCGEIQSIHMPKLVTRVKLGKLGTESLWRYIRHFNLVNSISNASRDQILHVVQRHFA

Query:  LQTSLNEASVMTEFIRTVKRRRE
        LQTSLNEASVMTEFIRTVKRRRE
Subjt:  LQTSLNEASVMTEFIRTVKRRRE

XP_023534417.1 uncharacterized protein LOC111795704 [Cucurbita pepo subsp. pepo]1.2e-12099.1Show/hide
Query:  MLEPEFCASRIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNKNDDHDLDNSSC
        MLEPEFCASRIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNKNDDHDLDNSSC
Subjt:  MLEPEFCASRIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNKNDDHDLDNSSC

Query:  SSDMGEKDNDLSSSIVFHKISKQRVRQIRPWAPSSSAKPTGRGSCGEIQSIHMPKLVTRVKLGKLGTESLWRYIRHFNLVNSISNASRDQILHVVQRHFA
        SSDMGEKDNDLSSSIVFHK+SKQ+VRQIRPWAPSSSAKPTGRGSCGEIQSIHMPKLVTRVKLGKLGTESLWRYIRHFNLVNSISNASRDQILHVVQRHFA
Subjt:  SSDMGEKDNDLSSSIVFHKISKQRVRQIRPWAPSSSAKPTGRGSCGEIQSIHMPKLVTRVKLGKLGTESLWRYIRHFNLVNSISNASRDQILHVVQRHFA

Query:  LQTSLNEASVMTEFIRTVKRRRE
        LQTSLNEASVMTEFIRTVKRRRE
Subjt:  LQTSLNEASVMTEFIRTVKRRRE

TrEMBL top hitse value%identityAlignment
A0A0A0KUM7 SAP30_Sin3_bdg domain-containing protein4.3e-10889.69Show/hide
Query:  MLEPEFCASRIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNKNDDHDLDNSSC
        M+EPEFCAS IQSPFREES DEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGN+ND+HDLDNSSC
Subjt:  MLEPEFCASRIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNKNDDHDLDNSSC

Query:  SSDMGEKDNDLSSSIVFHKISKQRVRQIRPWAPSSSAKPTGRGSCGEIQSIHMPKLVTRVKLGKLGTESLWRYIRHFNLVNSISNASRDQILHVVQRHFA
        SSD+GEKDND SSS+VFHK+SK +VRQI+PWAPSSSAK T RGS GEIQSIHMPK  TRV+LGKLGTESLWRYI+HFNLVNSISN SRDQIL VVQRHFA
Subjt:  SSDMGEKDNDLSSSIVFHKISKQRVRQIRPWAPSSSAKPTGRGSCGEIQSIHMPKLVTRVKLGKLGTESLWRYIRHFNLVNSISNASRDQILHVVQRHFA

Query:  LQTSLNEASVMTEFIRTVKRRRE
        LQTSLNEASVMTEFIR VK+RRE
Subjt:  LQTSLNEASVMTEFIRTVKRRRE

A0A1S3BU28 uncharacterized protein LOC1034931705.6e-10890.13Show/hide
Query:  MLEPEFCASRIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNKNDDHDLDNSSC
        M+EPEFCAS IQSPFREES DEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGN+ND+ DLDNSSC
Subjt:  MLEPEFCASRIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNKNDDHDLDNSSC

Query:  SSDMGEKDNDLSSSIVFHKISKQRVRQIRPWAPSSSAKPTGRGSCGEIQSIHMPKLVTRVKLGKLGTESLWRYIRHFNLVNSISNASRDQILHVVQRHFA
        SSD+GEKDND SSS+VFHK+SK +VRQI+ WAPSSSAK TGRGS GEIQSIHMPK  TRVKLGKLGTESLWRYI+HFNLVNSISN SRDQILHVVQRHFA
Subjt:  SSDMGEKDNDLSSSIVFHKISKQRVRQIRPWAPSSSAKPTGRGSCGEIQSIHMPKLVTRVKLGKLGTESLWRYIRHFNLVNSISNASRDQILHVVQRHFA

Query:  LQTSLNEASVMTEFIRTVKRRRE
        LQTSLNEASVMTEFIR VK+RRE
Subjt:  LQTSLNEASVMTEFIRTVKRRRE

A0A6J1C548 uncharacterized protein LOC111008453 isoform X41.1e-10891.52Show/hide
Query:  MLEPEFCASRIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNKNDDHDLDNSSC
        M+EPEFC+SRIQSPFREES DEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGN+NDDHD DNSSC
Subjt:  MLEPEFCASRIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNKNDDHDLDNSSC

Query:  SSDMGEKDNDLSSSIVFHKISKQRVRQIRPWAPSSSAK-PTGRGSCGEIQSIHMPKLVTRVKLGKLGTESLWRYIRHFNLVNSISNASRDQILHVVQRHF
        SSD+GEKDND SSSIVFHK+SK +VRQIRPWAPSSSAK  TGRGS GEIQSIH+PKL  RVKLGKLGTESLWRYIRHFNLVNSISNASRDQ+LHVVQRHF
Subjt:  SSDMGEKDNDLSSSIVFHKISKQRVRQIRPWAPSSSAK-PTGRGSCGEIQSIHMPKLVTRVKLGKLGTESLWRYIRHFNLVNSISNASRDQILHVVQRHF

Query:  ALQTSLNEASVMTEFIRTVKRRRE
        ALQT+LNEASVMTEFIR VKRRRE
Subjt:  ALQTSLNEASVMTEFIRTVKRRRE

A0A6J1FR82 uncharacterized protein LOC1114480381.5e-121100Show/hide
Query:  MLEPEFCASRIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNKNDDHDLDNSSC
        MLEPEFCASRIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNKNDDHDLDNSSC
Subjt:  MLEPEFCASRIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNKNDDHDLDNSSC

Query:  SSDMGEKDNDLSSSIVFHKISKQRVRQIRPWAPSSSAKPTGRGSCGEIQSIHMPKLVTRVKLGKLGTESLWRYIRHFNLVNSISNASRDQILHVVQRHFA
        SSDMGEKDNDLSSSIVFHKISKQRVRQIRPWAPSSSAKPTGRGSCGEIQSIHMPKLVTRVKLGKLGTESLWRYIRHFNLVNSISNASRDQILHVVQRHFA
Subjt:  SSDMGEKDNDLSSSIVFHKISKQRVRQIRPWAPSSSAKPTGRGSCGEIQSIHMPKLVTRVKLGKLGTESLWRYIRHFNLVNSISNASRDQILHVVQRHFA

Query:  LQTSLNEASVMTEFIRTVKRRRE
        LQTSLNEASVMTEFIRTVKRRRE
Subjt:  LQTSLNEASVMTEFIRTVKRRRE

A0A6J1IZT1 uncharacterized protein LOC1114814241.7e-12098.65Show/hide
Query:  MLEPEFCASRIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNKNDDHDLDNSSC
        MLEPEFCASRIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNKNDDHDLDNSSC
Subjt:  MLEPEFCASRIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNKNDDHDLDNSSC

Query:  SSDMGEKDNDLSSSIVFHKISKQRVRQIRPWAPSSSAKPTGRGSCGEIQSIHMPKLVTRVKLGKLGTESLWRYIRHFNLVNSISNASRDQILHVVQRHFA
        SSDMGEKDNDLSSSIVFHK+SKQ+VRQIRPWAPSSSAKPTGRGSCGEIQS HMPKLVTRVKLGKLGTESLWRYIRHFNLVNSISNASRDQILHVVQRHFA
Subjt:  SSDMGEKDNDLSSSIVFHKISKQRVRQIRPWAPSSSAKPTGRGSCGEIQSIHMPKLVTRVKLGKLGTESLWRYIRHFNLVNSISNASRDQILHVVQRHFA

Query:  LQTSLNEASVMTEFIRTVKRRRE
        LQTSLNEASVMTEFIRTVKRRRE
Subjt:  LQTSLNEASVMTEFIRTVKRRRE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G19330.1 unknown protein3.0e-4550.69Show/hide
Query:  RIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNKNDDHDLDNSSCSSDMGEKDN
        +IQS + + S +EELSVLPRHTKV+VTGNNRTKSVL+GLQGVVKKAVGLGGWHWLVL NG+EVKLQRNALSVLE PTGN+ DD DLD  +   +  +   
Subjt:  RIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNKNDDHDLDNSSCSSDMGEKDN

Query:  DLSSSIVFHKISKQRVRQIRPWAPSSSAKPTGRGSCGEIQSI---HMPKLVTRVKLGKLGTESLWRYIRHFNLVNSISNASRDQILHVVQRHFALQTSLN
           +S    K  K ++R  R  +  SS K   R    + QS      P    +V L KL   +L  Y RHFNLV++I N S++Q++ +VQRHF  Q  ++
Subjt:  DLSSSIVFHKISKQRVRQIRPWAPSSSAKPTGRGSCGEIQSI---HMPKLVTRVKLGKLGTESLWRYIRHFNLVNSISNASRDQILHVVQRHFALQTSLN

Query:  EASVMTEFIRTVKRRRE
        E  V+  F++  KR ++
Subjt:  EASVMTEFIRTVKRRRE

AT1G19330.2 unknown protein1.3e-4551.14Show/hide
Query:  RIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNKNDDH-DLDNSSCS-SDMGEK
        +IQS + + S +EELSVLPRHTKV+VTGNNRTKSVL+GLQGVVKKAVGLGGWHWLVL NG+EVKLQRNALSVLE PTGN+ DD  D +N+  + SDM  +
Subjt:  RIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNKNDDH-DLDNSSCS-SDMGEK

Query:  DNDLSSSIVFHKISKQRVRQIRPWAPSSSAKPTGRGSCGEIQSI---HMPKLVTRVKLGKLGTESLWRYIRHFNLVNSISNASRDQILHVVQRHFALQTS
        D     ++  HK   +  R  R     SS K   R    + QS      P    +V L KL   +L  Y RHFNLV++I N S++Q++ +VQRHF  Q  
Subjt:  DNDLSSSIVFHKISKQRVRQIRPWAPSSSAKPTGRGSCGEIQSI---HMPKLVTRVKLGKLGTESLWRYIRHFNLVNSISNASRDQILHVVQRHFALQTS

Query:  LNEASVMTEFIRTVKRRRE
        ++E  V+  F++  KR ++
Subjt:  LNEASVMTEFIRTVKRRRE

AT1G19330.3 unknown protein6.1e-4650.46Show/hide
Query:  RIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNKNDDHDLDNSSCSSDMGEKDN
        +IQS + + S +EELSVLPRHTKV+VTGNNRTKSVL+GLQGVVKKAVGLGGWHWLVL NG+EVKLQRNALSVLE PTGN+ DD DLD  +   +  +   
Subjt:  RIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNKNDDHDLDNSSCSSDMGEKDN

Query:  DLSSSIVFHKISKQRVRQIRPWAPSSSAKPTGRGSCGEIQS----IHMPKLVTRVKLGKLGTESLWRYIRHFNLVNSISNASRDQILHVVQRHFALQTSL
           +S    K  K ++R  R  +  SS K   R    + QS       P+ + +V L KL   +L  Y RHFNLV++I N S++Q++ +VQRHF  Q  +
Subjt:  DLSSSIVFHKISKQRVRQIRPWAPSSSAKPTGRGSCGEIQS----IHMPKLVTRVKLGKLGTESLWRYIRHFNLVNSISNASRDQILHVVQRHFALQTSL

Query:  NEASVMTEFIRTVKRRRE
        +E  V+  F++  KR ++
Subjt:  NEASVMTEFIRTVKRRRE

AT1G75060.1 unknown protein9.3e-4750.96Show/hide
Query:  SRIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNKNDDHDLDNSSCSSDMGEKD
        S++QS F + S +EELSVLPRHTKV+VTGNNRTKSVL+GLQGVVKKAVGLGGWHWLVL NG+EVKLQRNALSVLEHPTGN+ +D+DL+    +      D
Subjt:  SRIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNKNDDHDLDNSSCSSDMGEKD

Query:  NDLSSSIVFHKISKQRVRQIRPWAPSSSAKPTGRGSCGEIQSIHMPKLVTRVKLGKLGTESLWRYIRHFNLVNSISNASRDQILHVVQRHFALQTSLNEA
             ++  HK SK+R  +    +  +  +     S  +I SI  P+L  +V L KL   +L RY RHFNLV+++ N +++Q++ ++QRHF  Q  ++E 
Subjt:  NDLSSSIVFHKISKQRVRQIRPWAPSSSAKPTGRGSCGEIQSIHMPKLVTRVKLGKLGTESLWRYIRHFNLVNSISNASRDQILHVVQRHFALQTSLNEA

Query:  SVMTEFIR
         V+  F++
Subjt:  SVMTEFIR

AT1G75060.2 unknown protein1.8e-4550.96Show/hide
Query:  SRIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNKNDDHDLDNSSCSSDMGEKD
        S++QS F + S +EELSVLPRHTKV+VTGNNRTKSVL+GLQGVVKKAVGLGGWHWLVL NG+EVKLQRNALSVLEHPTGN+ +D+DL+    +      D
Subjt:  SRIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNKNDDHDLDNSSCSSDMGEKD

Query:  NDLSSSIVFHKISKQRVRQIRPWAPSSSAKPTGRGSCGEIQSIHMPKLVTRVKLGKLGTESLWRYIRHFNLVNSISNASRDQILHVVQRHFALQTSLNEA
             ++  HK SK+R  +    +  +  +     S  +I SI  P+L   V L KL   +L RY RHFNLV+++ N +++Q++ ++QRHF  Q  ++E 
Subjt:  NDLSSSIVFHKISKQRVRQIRPWAPSSSAKPTGRGSCGEIQSIHMPKLVTRVKLGKLGTESLWRYIRHFNLVNSISNASRDQILHVVQRHFALQTSLNEA

Query:  SVMTEFIR
         V+  F++
Subjt:  SVMTEFIR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGGAACCGGAGTTTTGTGCTTCTAGAATTCAGTCTCCTTTTCGTGAGGAGAGTTGGGATGAAGAGCTTTCAGTTCTTCCAAGGCACACTAAAGTTATTGTCACTGG
AAATAACAGAACAAAGTCTGTTTTACTGGGATTGCAAGGCGTAGTTAAGAAGGCTGTTGGCCTTGGAGGCTGGCATTGGCTGGTTTTGAAAAATGGGGTTGAAGTGAAGC
TGCAAAGGAATGCACTGAGTGTGCTGGAACATCCCACAGGAAACAAAAATGATGATCATGATTTGGACAACTCAAGTTGTAGCTCCGACATGGGTGAGAAGGACAATGAT
CTGTCTAGCAGCATTGTTTTCCACAAGATAAGCAAACAAAGAGTGAGACAAATTAGGCCATGGGCTCCATCTTCATCGGCAAAGCCAACAGGTCGGGGCAGCTGTGGGGA
AATTCAATCTATTCACATGCCGAAACTGGTCACGCGGGTGAAACTGGGGAAACTAGGAACAGAATCTTTGTGGAGATACATCAGGCACTTCAATCTAGTGAATAGCATTT
CAAATGCTTCAAGGGACCAAATCCTTCACGTTGTGCAACGACATTTTGCATTACAGACGAGCTTGAACGAGGCATCAGTGATGACTGAATTCATTCGCACTGTTAAGAGA
CGAAGGGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTGGAACCGGAGTTTTGTGCTTCTAGAATTCAGTCTCCTTTTCGTGAGGAGAGTTGGGATGAAGAGCTTTCAGTTCTTCCAAGGCACACTAAAGTTATTGTCACTGG
AAATAACAGAACAAAGTCTGTTTTACTGGGATTGCAAGGCGTAGTTAAGAAGGCTGTTGGCCTTGGAGGCTGGCATTGGCTGGTTTTGAAAAATGGGGTTGAAGTGAAGC
TGCAAAGGAATGCACTGAGTGTGCTGGAACATCCCACAGGAAACAAAAATGATGATCATGATTTGGACAACTCAAGTTGTAGCTCCGACATGGGTGAGAAGGACAATGAT
CTGTCTAGCAGCATTGTTTTCCACAAGATAAGCAAACAAAGAGTGAGACAAATTAGGCCATGGGCTCCATCTTCATCGGCAAAGCCAACAGGTCGGGGCAGCTGTGGGGA
AATTCAATCTATTCACATGCCGAAACTGGTCACGCGGGTGAAACTGGGGAAACTAGGAACAGAATCTTTGTGGAGATACATCAGGCACTTCAATCTAGTGAATAGCATTT
CAAATGCTTCAAGGGACCAAATCCTTCACGTTGTGCAACGACATTTTGCATTACAGACGAGCTTGAACGAGGCATCAGTGATGACTGAATTCATTCGCACTGTTAAGAGA
CGAAGGGAGTGAATCGAGTGACAGCGAGCGAGCGTGAATGATGATTGAAAAGTGATTTCACACAAATGTATGTTTGTATAGTGATTATGTCTGTTAAATGCTAACTATAA
CTTCGTAGCTTCTAACTTCTAACACTCGACCTTGATTACTACCTAGACCCGTAATATATTTTTAGCTTCTTTCTCT
Protein sequenceShow/hide protein sequence
MLEPEFCASRIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNKNDDHDLDNSSCSSDMGEKDND
LSSSIVFHKISKQRVRQIRPWAPSSSAKPTGRGSCGEIQSIHMPKLVTRVKLGKLGTESLWRYIRHFNLVNSISNASRDQILHVVQRHFALQTSLNEASVMTEFIRTVKR
RRE