; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G008060 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G008060
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionlate embryogenesis abundant protein D-29-like
Genome locationCmo_Chr04:4028732..4029824
RNA-Seq ExpressionCmoCh04G008060
SyntenyCmoCh04G008060
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600582.1 hypothetical protein SDJN03_05815, partial [Cucurbita argyrosperma subsp. sororia]2.8e-10098.54Show/hide
Query:  MGTSTWSFVAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKKGASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTAH
        MGT TWSFVAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKKGASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTAH
Subjt:  MGTSTWSFVAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKKGASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTAH

Query:  HMMDKAGDAATKTTHTIGTAASDASDKAGEAVKAVSDKASDAKTKAKDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAAKEMASHAAVQIGAKIR
        HMMD AGDAATKTTHTI TAASDASDKAGEAVKAVSDKASDAKTKAKDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAAKEMASHAAVQIGAKIR
Subjt:  HMMDKAGDAATKTTHTIGTAASDASDKAGEAVKAVSDKASDAKTKAKDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAAKEMASHAAVQIGAKIR

Query:  EKSSEL
        EKSSEL
Subjt:  EKSSEL

XP_022942848.1 late embryogenesis abundant protein D-29-like [Cucurbita moschata]1.4e-102100Show/hide
Query:  MGTSTWSFVAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKKGASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTAH
        MGTSTWSFVAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKKGASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTAH
Subjt:  MGTSTWSFVAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKKGASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTAH

Query:  HMMDKAGDAATKTTHTIGTAASDASDKAGEAVKAVSDKASDAKTKAKDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAAKEMASHAAVQIGAKIR
        HMMDKAGDAATKTTHTIGTAASDASDKAGEAVKAVSDKASDAKTKAKDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAAKEMASHAAVQIGAKIR
Subjt:  HMMDKAGDAATKTTHTIGTAASDASDKAGEAVKAVSDKASDAKTKAKDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAAKEMASHAAVQIGAKIR

Query:  EKSSEL
        EKSSEL
Subjt:  EKSSEL

XP_022983013.1 late embryogenesis abundant protein D-29-like [Cucurbita maxima]2.2e-7679.13Show/hide
Query:  MGTSTWSFVAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKKGASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTAH
        MGTSTWSFVAVLWLLWA EMGVVEKCRGEIGQGA+KDVKDNITEI EM N++GKAEA+KKGASEVFNDAKDAAESWSNWASA+ISKGLGLEEEGLKQTAH
Subjt:  MGTSTWSFVAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKKGASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTAH

Query:  HMMDKAGDAATKTTHTIGTAASDASDKAGEAVKAVSDKASDAKTKAKDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAAKEMASHAAVQIGAKIR
        HMMDKAG                                 DAKTKAK+T VNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAAKEMASHAAVQIGAKIR
Subjt:  HMMDKAGDAATKTTHTIGTAASDASDKAGEAVKAVSDKASDAKTKAKDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAAKEMASHAAVQIGAKIR

Query:  EKSSEL
        EKSSEL
Subjt:  EKSSEL

XP_023533965.1 uncharacterized protein LOC111795650 [Cucurbita pepo subsp. pepo]5.2e-9493.69Show/hide
Query:  MGTSTWSFVAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKKGASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTAH
        MGTSTWSFVAVLWLL AAEMGVVEKCRG +G+GAM+DVKDNITEIMEMTN+EGKAEAVKKGASEVFNDAKDAAES SNWASA+I+KGLGLEEEGLKQTAH
Subjt:  MGTSTWSFVAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKKGASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTAH

Query:  HMMDKAGDAATKTTHTIGTAASDASDKAGEAVKAVSDKASDAKTKAKDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAAKEMASHAAVQIGAKIR
        HMMDKAGDAATKTTHTI TAASDASDKAGEAVKAVSDKAS+AKTKAKDTF+NGKEKAAKVYEAAKTEVEREVAAVKECVNCEAAKE ASHAAVQIGAKIR
Subjt:  HMMDKAGDAATKTTHTIGTAASDASDKAGEAVKAVSDKASDAKTKAKDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAAKEMASHAAVQIGAKIR

Query:  EKSSEL
        EKSSEL
Subjt:  EKSSEL

XP_038906279.1 late embryogenesis abundant protein D-29 isoform X2 [Benincasa hispida]9.2e-5158.41Show/hide
Query:  TSTWSFVAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKKGASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTAHHM
        TS  S VAV+WLL      V +KCRG +G+ A++DVKDN++EI + T+++ KAEAVK GAS+VF+DAK+ AESWSNWA  +ISKGLG   E LK+TAH++
Subjt:  TSTWSFVAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKKGASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTAHHM

Query:  MDKAGDAATKTTHTIGTAASD----ASDKAGEAVKAVSD------------------KASDAKTKAKDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVN
        +DKAGDAATKTT  + TAASD    AS+KAGEAVKA SD                  KASD KTKAK+T V+GK+KAA+VYEAAK EV ++  A KE VN
Subjt:  MDKAGDAATKTTHTIGTAASD----ASDKAGEAVKAVSD------------------KASDAKTKAKDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVN

Query:  CEAAKEMASHAAVQIGAKIREKSSEL
        C AAKEMAS +A +IG +IREK++EL
Subjt:  CEAAKEMASHAAVQIGAKIREKSSEL

TrEMBL top hitse value%identityAlignment
A0A0A0KUJ5 Uncharacterized protein7.2e-4153.15Show/hide
Query:  MGTSTWSF-VAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKKGASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTA
        MG  T +  VAV+WL+      V EKC G  G+ A+KDVK+N++EI E  N++ KAEAVK  ASEV+ +AKD  ESWSNWA  +IS+GLGL EE +K+TA
Subjt:  MGTSTWSF-VAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKKGASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTA

Query:  HHMMDKAGDAATKTTHTIGTAASD----ASDKAGEAVKAVSDKASDAKTKA-----------KDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAA
        H++ DKAGDAA KTT  I TAASD    AS+KAGEA KA S+ AS  K+K+           K+T V+GK+KAA++YEAAK          K+  NCE A
Subjt:  HHMMDKAGDAATKTTHTIGTAASD----ASDKAGEAVKAVSDKASDAKTKA-----------KDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAA

Query:  KEMASHAAVQIGAKIREKSSEL
        +EMAS  A +IG +IREKS+EL
Subjt:  KEMASHAAVQIGAKIREKSSEL

A0A1S3BT31 late embryogenesis abundant protein D-29-like4.6e-4053.6Show/hide
Query:  MGTSTWSF-VAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKKGASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTA
        MG  T +  VAV+WL+      V EKC G  G+ A++DVKDN++EI E   ++ KAEAVK  ASEV++DAKD AESWSNWA  +ISKGLGL E+ LK+TA
Subjt:  MGTSTWSF-VAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKKGASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTA

Query:  HHMMDKAGDAATKTTHTIGTAASD----ASDKAGEAVKAVSDKASDAKTKA-----------KDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAA
        H++ DKAGDAA KTT  I TAAS     AS+KAGEA KA S+ AS+ K+K+           K+T V+GK+KAA+VYEAAK          K+  NCE A
Subjt:  HHMMDKAGDAATKTTHTIGTAASD----ASDKAGEAVKAVSDKASDAKTKA-----------KDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAA

Query:  KEMASHAAVQIGAKIREKSSEL
        +EMAS  A +IG +IREK++EL
Subjt:  KEMASHAAVQIGAKIREKSSEL

A0A5A7TSE6 Late embryogenesis abundant protein D-29-like4.6e-4053.6Show/hide
Query:  MGTSTWSF-VAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKKGASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTA
        MG  T +  VAV+WL+      V EKC G  G+ A++DVKDN++EI E   ++ KAEAVK  ASEV++DAKD AESWSNWA  +ISKGLGL E+ LK+TA
Subjt:  MGTSTWSF-VAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKKGASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTA

Query:  HHMMDKAGDAATKTTHTIGTAASD----ASDKAGEAVKAVSDKASDAKTKA-----------KDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAA
        H++ DKAGDAA KTT  I TAAS     AS+KAGEA KA S+ AS+ K+K+           K+T V+GK+KAA+VYEAAK          K+  NCE A
Subjt:  HHMMDKAGDAATKTTHTIGTAASD----ASDKAGEAVKAVSDKASDAKTKA-----------KDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAA

Query:  KEMASHAAVQIGAKIREKSSEL
        +EMAS  A +IG +IREK++EL
Subjt:  KEMASHAAVQIGAKIREKSSEL

A0A6J1FVT6 late embryogenesis abundant protein D-29-like6.6e-103100Show/hide
Query:  MGTSTWSFVAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKKGASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTAH
        MGTSTWSFVAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKKGASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTAH
Subjt:  MGTSTWSFVAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKKGASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTAH

Query:  HMMDKAGDAATKTTHTIGTAASDASDKAGEAVKAVSDKASDAKTKAKDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAAKEMASHAAVQIGAKIR
        HMMDKAGDAATKTTHTIGTAASDASDKAGEAVKAVSDKASDAKTKAKDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAAKEMASHAAVQIGAKIR
Subjt:  HMMDKAGDAATKTTHTIGTAASDASDKAGEAVKAVSDKASDAKTKAKDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAAKEMASHAAVQIGAKIR

Query:  EKSSEL
        EKSSEL
Subjt:  EKSSEL

A0A6J1J6J8 late embryogenesis abundant protein D-29-like1.1e-7679.13Show/hide
Query:  MGTSTWSFVAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKKGASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTAH
        MGTSTWSFVAVLWLLWA EMGVVEKCRGEIGQGA+KDVKDNITEI EM N++GKAEA+KKGASEVFNDAKDAAESWSNWASA+ISKGLGLEEEGLKQTAH
Subjt:  MGTSTWSFVAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKKGASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTAH

Query:  HMMDKAGDAATKTTHTIGTAASDASDKAGEAVKAVSDKASDAKTKAKDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAAKEMASHAAVQIGAKIR
        HMMDKAG                                 DAKTKAK+T VNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAAKEMASHAAVQIGAKIR
Subjt:  HMMDKAGDAATKTTHTIGTAASDASDKAGEAVKAVSDKASDAKTKAKDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAAKEMASHAAVQIGAKIR

Query:  EKSSEL
        EKSSEL
Subjt:  EKSSEL

SwissProt top hitse value%identityAlignment
P13940 Late embryogenesis abundant protein D-293.0e-0429.94Show/hide
Query:  IEGKAEAVKKGASEVFNDAKDAAESWSNWASAQISKGLGL-EEEGLKQTAHHMMDKAGDAATKTTHTIGTAAS--------DASDKAGEAVKAVSDKASD
        ++   +  K  ASEV  +AK+  ESW+ WA  +IS+GLG  +++  K +     D   D ATKT   +   AS         A D    A K   D  + 
Subjt:  IEGKAEAVKKGASEVFNDAKDAAESWSNWASAQISKGLGL-EEEGLKQTAHHMMDKAGDAATKTTHTIGTAAS--------DASDKAGEAVKAVSDKASD

Query:  AKTKAKDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVN--CEAAKEMASHAAVQIGAKIREKSSEL
        AK K+ +      EKA ++ ++AK        A KE V    +   EM + A  + GA+  E++ E+
Subjt:  AKTKAKDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVN--CEAAKEMASHAAVQIGAKIREKSSEL

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGACAAGCACGTGGTCGTTTGTGGCGGTTTTGTGGCTGTTATGGGCGGCGGAGATGGGGGTGGTGGAAAAATGCAGGGGTGAAATAGGACAAGGAGCAATGAAGGA
TGTGAAGGATAATATCACTGAAATTATGGAGATGACGAATATTGAGGGAAAAGCAGAAGCCGTTAAGAAAGGTGCTTCTGAAGTGTTTAATGACGCCAAGGACGCAGCTG
AGTCTTGGTCCAACTGGGCTTCCGCCCAGATTTCCAAGGGATTAGGATTGGAAGAAGAAGGATTGAAACAGACAGCCCACCACATGATGGACAAAGCCGGCGACGCAGCC
ACAAAAACCACACACACAATCGGCACAGCAGCTTCAGATGCATCTGACAAAGCCGGAGAGGCGGTGAAGGCGGTGTCGGATAAAGCCAGCGACGCCAAAACGAAGGCCAA
AGACACGTTTGTGAACGGGAAAGAGAAGGCGGCGAAGGTGTATGAAGCGGCTAAAACCGAGGTGGAGCGGGAAGTTGCGGCGGTTAAGGAGTGTGTGAACTGTGAAGCTG
CTAAAGAGATGGCGTCGCATGCCGCCGTACAAATCGGGGCGAAGATAAGGGAGAAGTCCTCGGAGCTGTGA
mRNA sequenceShow/hide mRNA sequence
CTTTTCAGATCAGAAGGCAGCGATGGGGACAAGCACGTGGTCGTTTGTGGCGGTTTTGTGGCTGTTATGGGCGGCGGAGATGGGGGTGGTGGAAAAATGCAGGGGTGAAA
TAGGACAAGGAGCAATGAAGGATGTGAAGGATAATATCACTGAAATTATGGAGATGACGAATATTGAGGGAAAAGCAGAAGCCGTTAAGAAAGGTGCTTCTGAAGTGTTT
AATGACGCCAAGGACGCAGCTGAGTCTTGGTCCAACTGGGCTTCCGCCCAGATTTCCAAGGGATTAGGATTGGAAGAAGAAGGATTGAAACAGACAGCCCACCACATGAT
GGACAAAGCCGGCGACGCAGCCACAAAAACCACACACACAATCGGCACAGCAGCTTCAGATGCATCTGACAAAGCCGGAGAGGCGGTGAAGGCGGTGTCGGATAAAGCCA
GCGACGCCAAAACGAAGGCCAAAGACACGTTTGTGAACGGGAAAGAGAAGGCGGCGAAGGTGTATGAAGCGGCTAAAACCGAGGTGGAGCGGGAAGTTGCGGCGGTTAAG
GAGTGTGTGAACTGTGAAGCTGCTAAAGAGATGGCGTCGCATGCCGCCGTACAAATCGGGGCGAAGATAAGGGAGAAGTCCTCGGAGCTGTGAGCTTGACGCCCGGCTCT
GTCTTTTTTGTATTGATTTTCATTTCATTTTATTTTTGGGTCTAGGCTGAGTTGTAAAATATTCATTATTGTTTGATACTGTCTTAACGACATTCTTCTTCTCATGAATA
ATTGTTCCTATAATTTAGGATTCATAATTTTAATGTTTCTTGAGTTTGTTCTTCCAAACAATTGATTATTACAAATGCATCATACTCTGTTTCGATGTATGTCCGGCTAG
GAAAATGGGCTTTCTATATATATATTATGG
Protein sequenceShow/hide protein sequence
MGTSTWSFVAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKKGASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTAHHMMDKAGDAA
TKTTHTIGTAASDASDKAGEAVKAVSDKASDAKTKAKDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAAKEMASHAAVQIGAKIREKSSEL