; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G008220 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G008220
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUbiquitin-conjugating enzyme family protein
Genome locationCmo_Chr04:4086461..4098063
RNA-Seq ExpressionCmoCh04G008220
SyntenyCmoCh04G008220
Gene Ontology termsGO:0009734 - auxin-activated signaling pathway (biological process)
GO:0009851 - auxin biosynthetic process (biological process)
GO:0010104 - regulation of ethylene-activated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005783 - endoplasmic reticulum (cellular component)
GO:0005794 - Golgi apparatus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR000608 - Ubiquitin-conjugating enzyme E2
IPR006510 - Zinc finger, lateral root primordium type 1
IPR006511 - SHORT INTERNODES, C-terminal
IPR008496 - TMEM222/RTE1
IPR016135 - Ubiquitin-conjugating enzyme/RWD-like
IPR023313 - Ubiquitin-conjugating enzyme, active site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600597.1 Protein RTE1-HOMOLOG, partial [Cucurbita argyrosperma subsp. sororia]1.7e-29993.66Show/hide
Query:  MAGFFPLGGGREPNYHLPTTTTTTTDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRT
        MAGF+PLGGGREPNYHLPTTTTTTTDGLFWYRNYESL IWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRT
Subjt:  MAGFFPLGGGREPNYHLPTTTTTTTDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRT

Query:  CCKSRGFDCETHVKSTWVPASKRRERHLRSDGTNLKRPRDNTAASSGLEMRNFPVEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGP
        CCKSRGFDCETHVKSTWVPASKRRERHLRSDGTNLKRPRDNTAASSGLEM NFPVEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGP
Subjt:  CCKSRGFDCETHVKSTWVPASKRRERHLRSDGTNLKRPRDNTAASSGLEMRNFPVEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGP

Query:  EQQQQ-PPPPPPNSASPDGGALLITAPSTTMELPPISAALLDPPPPYPAPLNTYVAAVYQRCLKVQFNVSVGSRFQSFSIPKSSRSFKFGLVGGGRVVAG
        EQQQQ PPPPPPNSASPDGG LLITAPSTTMELPPISAALLDPPPPYPAPLNTYVAAVYQRCLKVQFNVSVGSR           +F+F           
Subjt:  EQQQQ-PPPPPPNSASPDGGALLITAPSTTMELPPISAALLDPPPPYPAPLNTYVAAVYQRCLKVQFNVSVGSRFQSFSIPKSSRSFKFGLVGGGRVVAG

Query:  SGYVLVVHTIFLHQNCSDRKHLITLEMGSSNDPENQMMIEGNVVQKMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVILDFAGPNFVCVDN
             VVHTIFLHQNCSDRKHLITLEMGSSNDPENQMMIEGNVVQKMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVILDFAGPNFVCVDN
Subjt:  SGYVLVVHTIFLHQNCSDRKHLITLEMGSSNDPENQMMIEGNVVQKMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVILDFAGPNFVCVDN

Query:  FTFGAVARYLQINTDKCCISTHRSEDEFREVDNGREISTWDDALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFVTGGWNVVNLAALMFLKGRWVSKG
        FTFGAVARYLQINTDKCCISTHRSEDEFREVDNGREISTWDDALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFVTGGWNVVNLAALMFLKGRWVSKG
Subjt:  FTFGAVARYLQINTDKCCISTHRSEDEFREVDNGREISTWDDALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFVTGGWNVVNLAALMFLKGRWVSKG

Query:  AVIRTFLPFGVVFSIGVAMVGTTFLTFLAFFTFFLVGWFVLGTYVFKNLVQL
        AVIRTFLPFGVVFSIGVAM GTTFLTFLAFFTFFLVGWFVLGTYVFKNLVQL
Subjt:  AVIRTFLPFGVVFSIGVAMVGTTFLTFLAFFTFFLVGWFVLGTYVFKNLVQL

KAG7031235.1 Protein SHORT INTERNODES, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-14298.05Show/hide
Query:  MAGFFPLGGGREPNYHLPTTTTTTTDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRT
        MAGF+PLGGGREPNYHLPTTTTTTTDGLFWYRNYESL IWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRT
Subjt:  MAGFFPLGGGREPNYHLPTTTTTTTDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRT

Query:  CCKSRGFDCETHVKSTWVPASKRRERHLRSDGTNLKRPRDNTAASSGLEMRNFPVEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGP
        CCKSRGFDCETHVKSTWVPASKRRERHLRSDGTNLKRPRDNTAASSGLEM NFPVEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGP
Subjt:  CCKSRGFDCETHVKSTWVPASKRRERHLRSDGTNLKRPRDNTAASSGLEMRNFPVEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGP

Query:  EQQQQ-PPPPPPNSASPDGGALLITAPSTTMELPPISAALLDPPPPYPAPLNTYVAA
        EQQQQ PPPPPPNSASPDGG LLITAPSTTMELPPISAALLDPPPPYPAPLNTYVAA
Subjt:  EQQQQ-PPPPPPNSASPDGGALLITAPSTTMELPPISAALLDPPPPYPAPLNTYVAA

XP_022942307.1 protein SHORT INTERNODES-like [Cucurbita moschata]1.9e-146100Show/hide
Query:  MAGFFPLGGGREPNYHLPTTTTTTTDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRT
        MAGFFPLGGGREPNYHLPTTTTTTTDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRT
Subjt:  MAGFFPLGGGREPNYHLPTTTTTTTDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRT

Query:  CCKSRGFDCETHVKSTWVPASKRRERHLRSDGTNLKRPRDNTAASSGLEMRNFPVEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGP
        CCKSRGFDCETHVKSTWVPASKRRERHLRSDGTNLKRPRDNTAASSGLEMRNFPVEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGP
Subjt:  CCKSRGFDCETHVKSTWVPASKRRERHLRSDGTNLKRPRDNTAASSGLEMRNFPVEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGP

Query:  EQQQQPPPPPPNSASPDGGALLITAPSTTMELPPISAALLDPPPPYPAPLNTYVAA
        EQQQQPPPPPPNSASPDGGALLITAPSTTMELPPISAALLDPPPPYPAPLNTYVAA
Subjt:  EQQQQPPPPPPNSASPDGGALLITAPSTTMELPPISAALLDPPPPYPAPLNTYVAA

XP_022982329.1 protein SHI RELATED SEQUENCE 1-like [Cucurbita maxima]1.3e-13997.27Show/hide
Query:  MAGFFPLGGGREPNYHLPTTTTTTTDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRT
        MAGFFPLGGGREPNYHLP  TTTTTDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRT
Subjt:  MAGFFPLGGGREPNYHLPTTTTTTTDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRT

Query:  CCKSRGFDCETHVKSTWVPASKRRERHLRSDGTNLKRPRDNTAASSGLEMRNFPVEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGP
        CCKSRGFDCETHVKSTWVPASKRRERHLRSD TNLKRPRDNTAASSGLEM NFP+EVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGP
Subjt:  CCKSRGFDCETHVKSTWVPASKRRERHLRSDGTNLKRPRDNTAASSGLEMRNFPVEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGP

Query:  EQQQQPPPPPPNSASPDGGALLITAPSTTMELPPISAALLDPPPPYPAPLNTYVAA
        EQQQQ PPPPPNSASPDGGALLITAP+TTMELPPISAALLDPPPPYPAPLNTYVAA
Subjt:  EQQQQPPPPPPNSASPDGGALLITAPSTTMELPPISAALLDPPPPYPAPLNTYVAA

XP_023552309.1 protein SHI RELATED SEQUENCE 1-like isoform X1 [Cucurbita pepo subsp. pepo]2.4e-14197.67Show/hide
Query:  MAGFFPLGGGREPNYHLPTTTTTT-TDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCR
        MAGF+PLGGGREPNYHLPTTTTTT TDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCR
Subjt:  MAGFFPLGGGREPNYHLPTTTTTT-TDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCR

Query:  TCCKSRGFDCETHVKSTWVPASKRRERHLRSDGTNLKRPRDNTAASSGLEMRNFPVEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHG
        TCCKSRGFDCETHVKSTWVPASKRRERHLRSDGTNLKRPRDNTAASSGLEM N PVEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHG
Subjt:  TCCKSRGFDCETHVKSTWVPASKRRERHLRSDGTNLKRPRDNTAASSGLEMRNFPVEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHG

Query:  PEQQQQ-PPPPPPNSASPDGGALLITAPSTTMELPPISAALLDPPPPYPAPLNTYVAA
        PEQQQQ PPPPPPNSASPDGGALLITAPSTTMELPPIS ALLDPPPPYPAPLNTYVAA
Subjt:  PEQQQQ-PPPPPPNSASPDGGALLITAPSTTMELPPISAALLDPPPPYPAPLNTYVAA

TrEMBL top hitse value%identityAlignment
A0A0A0KXZ7 Uncharacterized protein2.3e-11690Show/hide
Query:  ITLEMGSSNDPENQMMIEGNVVQKMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVARYLQINTDKCCISTH
        ++LEM SS DPENQ+MIEGN+ Q MKIDPERARFPCCIVWTPLPVISWL+PFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVARYLQIN DKCCIS H
Subjt:  ITLEMGSSNDPENQMMIEGNVVQKMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVARYLQINTDKCCISTH

Query:  RSEDEFREVDNGREISTWDDALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFVTGGWNVVNLAALMFLKGRWVSKGAVIRTFLPFGVVFSIGVAMVGT
        RSE+E REVD+ REISTWDDALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGF TGGWNVVNLAAL+FLKGRWVSKGAVIRTFLPF VVFSIG+A+  T
Subjt:  RSEDEFREVDNGREISTWDDALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFVTGGWNVVNLAALMFLKGRWVSKGAVIRTFLPFGVVFSIGVAMVGT

Query:  TFLTFLAFFTFFLVGWFVLGTYVFKNLVQL
        TFLTFLAFFTFFLVGWF+LGTYVFKNLVQL
Subjt:  TFLTFLAFFTFFLVGWFVLGTYVFKNLVQL

A0A6J1FUH1 protein SHORT INTERNODES-like9.4e-147100Show/hide
Query:  MAGFFPLGGGREPNYHLPTTTTTTTDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRT
        MAGFFPLGGGREPNYHLPTTTTTTTDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRT
Subjt:  MAGFFPLGGGREPNYHLPTTTTTTTDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRT

Query:  CCKSRGFDCETHVKSTWVPASKRRERHLRSDGTNLKRPRDNTAASSGLEMRNFPVEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGP
        CCKSRGFDCETHVKSTWVPASKRRERHLRSDGTNLKRPRDNTAASSGLEMRNFPVEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGP
Subjt:  CCKSRGFDCETHVKSTWVPASKRRERHLRSDGTNLKRPRDNTAASSGLEMRNFPVEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGP

Query:  EQQQQPPPPPPNSASPDGGALLITAPSTTMELPPISAALLDPPPPYPAPLNTYVAA
        EQQQQPPPPPPNSASPDGGALLITAPSTTMELPPISAALLDPPPPYPAPLNTYVAA
Subjt:  EQQQQPPPPPPNSASPDGGALLITAPSTTMELPPISAALLDPPPPYPAPLNTYVAA

A0A6J1FW19 protein RTE1-HOMOLOG-like8.2e-127100Show/hide
Query:  MGSSNDPENQMMIEGNVVQKMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVARYLQINTDKCCISTHRSED
        MGSSNDPENQMMIEGNVVQKMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVARYLQINTDKCCISTHRSED
Subjt:  MGSSNDPENQMMIEGNVVQKMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVARYLQINTDKCCISTHRSED

Query:  EFREVDNGREISTWDDALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFVTGGWNVVNLAALMFLKGRWVSKGAVIRTFLPFGVVFSIGVAMVGTTFLT
        EFREVDNGREISTWDDALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFVTGGWNVVNLAALMFLKGRWVSKGAVIRTFLPFGVVFSIGVAMVGTTFLT
Subjt:  EFREVDNGREISTWDDALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFVTGGWNVVNLAALMFLKGRWVSKGAVIRTFLPFGVVFSIGVAMVGTTFLT

Query:  FLAFFTFFLVGWFVLGTYVFKNLVQL
        FLAFFTFFLVGWFVLGTYVFKNLVQL
Subjt:  FLAFFTFFLVGWFVLGTYVFKNLVQL

A0A6J1J2Z1 protein RTE1-HOMOLOG-like1.9e-12397.79Show/hide
Query:  MGSSNDPENQMMIEGNVVQKMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVARYLQINTDKCCISTHRSED
        MGSSNDPENQMMIEGNVVQ+MKIDPE ARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVILDFA PNFVCVDNFTFGAVARYLQINTDKCCISTHRSED
Subjt:  MGSSNDPENQMMIEGNVVQKMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVARYLQINTDKCCISTHRSED

Query:  EFREVDNGREISTWDDALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFVTGGWNVVNLAALMFLKGRWVSKGAVIRTFLPFGVVFSIGVAMVGTTFLT
        EFREVDNGREISTWDDALRRSTQEFQHR YNLLTCNCHSFVANNLNRLGFVTGGWNVVNLAALMFLKGRWVSKGAVIRTFLPFGVVFSIGVAM GTTFLT
Subjt:  EFREVDNGREISTWDDALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFVTGGWNVVNLAALMFLKGRWVSKGAVIRTFLPFGVVFSIGVAMVGTTFLT

Query:  FLAFFTFFLVGWFVLGTYVFKNLVQL
        FLAFFTFFLVGWFVLGTYVFKNLVQL
Subjt:  FLAFFTFFLVGWFVLGTYVFKNLVQL

A0A6J1J480 protein SHI RELATED SEQUENCE 1-like6.5e-14097.27Show/hide
Query:  MAGFFPLGGGREPNYHLPTTTTTTTDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRT
        MAGFFPLGGGREPNYHLP  TTTTTDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRT
Subjt:  MAGFFPLGGGREPNYHLPTTTTTTTDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRT

Query:  CCKSRGFDCETHVKSTWVPASKRRERHLRSDGTNLKRPRDNTAASSGLEMRNFPVEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGP
        CCKSRGFDCETHVKSTWVPASKRRERHLRSD TNLKRPRDNTAASSGLEM NFP+EVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGP
Subjt:  CCKSRGFDCETHVKSTWVPASKRRERHLRSDGTNLKRPRDNTAASSGLEMRNFPVEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGP

Query:  EQQQQPPPPPPNSASPDGGALLITAPSTTMELPPISAALLDPPPPYPAPLNTYVAA
        EQQQQ PPPPPNSASPDGGALLITAP+TTMELPPISAALLDPPPPYPAPLNTYVAA
Subjt:  EQQQQPPPPPPNSASPDGGALLITAPSTTMELPPISAALLDPPPPYPAPLNTYVAA

SwissProt top hitse value%identityAlignment
O23239 Probable ubiquitin-conjugating enzyme E2 171.5e-7781.99Show/hide
Query:  MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICL
        MTSSS+S RK L+KIA NRLQKE +EWQ NPP+GFKH+V+DNLQRW+IEV+G PGTLYANETYQLQV+FPEHYPMEAPQVIF HPAPLHPHIYSNGHICL
Subjt:  MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICL

Query:  DILYDSWSPAMTVSSICISILSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV
        D+LYDSWSPAM +SSIC+SILSMLSSS+ KQ+P DND Y+KNC++GRSPKETRW FHDDKV
Subjt:  DILYDSWSPAMTVSSICISILSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV

P42743 Ubiquitin-conjugating enzyme 151.7e-8186.96Show/hide
Query:  MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICL
        MTSSS  +RKALSKIACNRLQKEL EWQ+NPP GF+HKVTDNLQ+W I+V GAPGTLYANETYQLQV+FPEHYPMEAPQV+F+ PAP HPHIYSNGHICL
Subjt:  MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICL

Query:  DILYDSWSPAMTVSSICISILSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV
        DILYDSWSPAMTV+S+CISILSMLSSS AKQRP DNDRYVKNC+NGRSPKETRWWFHDDKV
Subjt:  DILYDSWSPAMTVSSICISILSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV

Q9FMM0 Probable ubiquitin-conjugating enzyme E2 181.6e-8288.82Show/hide
Query:  MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICL
        MTSSS  +RKALSKIACNRLQKEL EWQVNPP GFKH+VTDNLQ+WVIEV GAPGTLYANETY LQV+FP+HYPMEAPQVIF+ PAPLHPHIYSNGHICL
Subjt:  MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICL

Query:  DILYDSWSPAMTVSSICISILSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV
        DILYDSWSPAMTVSS+CISILSMLSSS  KQRP DNDRYVKNC+NGRSPKETRWWFHDDKV
Subjt:  DILYDSWSPAMTVSSICISILSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV

Q9FWT2 Probable ubiquitin-conjugating enzyme E2 162.4e-8390.06Show/hide
Query:  MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICL
        M+SS   +RK LSKIA NRLQKELVEWQ+NPP GFKHKVTDNLQRW+IEV GAPGTLYAN+TYQLQVDFPEHYPME+PQVIFLHPAPLHPHIYSNGHICL
Subjt:  MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICL

Query:  DILYDSWSPAMTVSSICISILSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV
        DILYDSWSPAMTVSSICISILSMLSSST KQRP DNDRYVKNC+NGRSPKETRWWFHDDKV
Subjt:  DILYDSWSPAMTVSSICISILSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV

Q9SD42 Protein RTE1-HOMOLOG5.1e-7357.94Show/hide
Query:  SSNDPENQMMIEGNVVQKMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVARYLQINTDKCCISTHRSEDE-
        ++ D E++MMI   +   MKIDP+R RFPCCIVWTPLP ISWL+PFIGH+GI REDGVILDFAGPNFVCVDNF FGAV+RY+QIN +   + + RS    
Subjt:  SSNDPENQMMIEGNVVQKMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVARYLQINTDKCCISTHRSEDE-

Query:  --------FREVDNGREISTWDDALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFVTGGWNVVNLAALMFLKGRWVSKGAVIRTFLPFGVVFSIGVAM
                 +E D+  +  TWDDALR+STQE+QH +YN+LTCNCHSFVANNLNRL   +GGWNVVNLA L+  KGRWV+K A++++ LP  +V++IG+ +
Subjt:  --------FREVDNGREISTWDDALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFVTGGWNVVNLAALMFLKGRWVSKGAVIRTFLPFGVVFSIGVAM

Query:  VGTTFLTFLAFFTFFLVGWFVLGTYVFKNLVQL
         G TF+   +     L GWF++GTY FK L+QL
Subjt:  VGTTFLTFLAFFTFFLVGWFVLGTYVFKNLVQL

Arabidopsis top hitse value%identityAlignment
AT1G45050.1 Ubiquitin-conjugating enzyme family protein1.2e-8286.96Show/hide
Query:  MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICL
        MTSSS  +RKALSKIACNRLQKEL EWQ+NPP GF+HKVTDNLQ+W I+V GAPGTLYANETYQLQV+FPEHYPMEAPQV+F+ PAP HPHIYSNGHICL
Subjt:  MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICL

Query:  DILYDSWSPAMTVSSICISILSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV
        DILYDSWSPAMTV+S+CISILSMLSSS AKQRP DNDRYVKNC+NGRSPKETRWWFHDDKV
Subjt:  DILYDSWSPAMTVSSICISILSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV

AT1G75440.1 ubiquitin-conjugating enzyme 161.7e-8490.06Show/hide
Query:  MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICL
        M+SS   +RK LSKIA NRLQKELVEWQ+NPP GFKHKVTDNLQRW+IEV GAPGTLYAN+TYQLQVDFPEHYPME+PQVIFLHPAPLHPHIYSNGHICL
Subjt:  MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICL

Query:  DILYDSWSPAMTVSSICISILSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV
        DILYDSWSPAMTVSSICISILSMLSSST KQRP DNDRYVKNC+NGRSPKETRWWFHDDKV
Subjt:  DILYDSWSPAMTVSSICISILSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV

AT3G51040.1 RTE1-homolog3.6e-7457.94Show/hide
Query:  SSNDPENQMMIEGNVVQKMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVARYLQINTDKCCISTHRSEDE-
        ++ D E++MMI   +   MKIDP+R RFPCCIVWTPLP ISWL+PFIGH+GI REDGVILDFAGPNFVCVDNF FGAV+RY+QIN +   + + RS    
Subjt:  SSNDPENQMMIEGNVVQKMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVARYLQINTDKCCISTHRSEDE-

Query:  --------FREVDNGREISTWDDALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFVTGGWNVVNLAALMFLKGRWVSKGAVIRTFLPFGVVFSIGVAM
                 +E D+  +  TWDDALR+STQE+QH +YN+LTCNCHSFVANNLNRL   +GGWNVVNLA L+  KGRWV+K A++++ LP  +V++IG+ +
Subjt:  --------FREVDNGREISTWDDALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFVTGGWNVVNLAALMFLKGRWVSKGAVIRTFLPFGVVFSIGVAM

Query:  VGTTFLTFLAFFTFFLVGWFVLGTYVFKNLVQL
         G TF+   +     L GWF++GTY FK L+QL
Subjt:  VGTTFLTFLAFFTFFLVGWFVLGTYVFKNLVQL

AT4G36410.1 ubiquitin-conjugating enzyme 171.1e-7881.99Show/hide
Query:  MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICL
        MTSSS+S RK L+KIA NRLQKE +EWQ NPP+GFKH+V+DNLQRW+IEV+G PGTLYANETYQLQV+FPEHYPMEAPQVIF HPAPLHPHIYSNGHICL
Subjt:  MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICL

Query:  DILYDSWSPAMTVSSICISILSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV
        D+LYDSWSPAM +SSIC+SILSMLSSS+ KQ+P DND Y+KNC++GRSPKETRW FHDDKV
Subjt:  DILYDSWSPAMTVSSICISILSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV

AT5G42990.1 ubiquitin-conjugating enzyme 181.1e-8388.82Show/hide
Query:  MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICL
        MTSSS  +RKALSKIACNRLQKEL EWQVNPP GFKH+VTDNLQ+WVIEV GAPGTLYANETY LQV+FP+HYPMEAPQVIF+ PAPLHPHIYSNGHICL
Subjt:  MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICL

Query:  DILYDSWSPAMTVSSICISILSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV
        DILYDSWSPAMTVSS+CISILSMLSSS  KQRP DNDRYVKNC+NGRSPKETRWWFHDDKV
Subjt:  DILYDSWSPAMTVSSICISILSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGGTTTTTTCCCACTAGGCGGCGGAAGAGAACCCAATTATCACCTTCCCACCACCACCACCACCACCACGGACGGATTATTTTGGTACAGAAATTATGAG
AGCCTTGGAATTTGGCAGCAACAGCAGGTGCAGCAGCAAGCGGGAGAAGGGTTTGTTTACTCGGGCGATGAATCGCCTCCAAGATCGTCGTTGGTGATGCTGAGA
TCCGGCAGAAACGGGGGAGGGCAAGTAATAAGCTGCCAAGATTGTGGAAATCAAGCCAAAAAGGATTGCCTTCACATGCGATGTAGAACTTGCTGTAAAAGTCGT
GGCTTTGACTGTGAAACCCACGTCAAAAGTACTTGGGTTCCGGCCTCCAAACGCCGTGAGCGACACCTCCGCAGCGACGGCACTAATCTCAAACGACCTCGAGAC
AACACCGCCGCTTCCTCAGGGTTAGAAATGAGGAATTTTCCGGTGGAAGTGAGCTCAACGGCGGTGTTTCGGTGCGTGCGAATGACAACGTTGGACGAAACCAAC
GACCAATTTGCTTACCAAACAGCCGTCAACATCGGAGGCCATACCTTCAAGGGCATTCTTTACGACCACGGCCCTGAACAACAACAACAACCACCACCACCACCA
CCCAACTCCGCCTCCCCCGACGGTGGCGCCCTCCTCATCACCGCCCCCTCCACCACCATGGAATTGCCACCCATCAGCGCCGCATTGCTCGATCCTCCTCCGCCG
TACCCAGCTCCTCTGAACACCTACGTCGCCGCCGTGTACCAGAGATGCCTCAAAGTGCAATTCAATGTGTCTGTAGGTAGCAGATTTCAGAGCTTTTCAATTCCA
AAATCTTCAAGATCTTTCAAATTTGGGCTTGTGGGCGGCGGAAGAGTCGTCGCCGGCAGTGGATACGTCTTGGTCGTTCACACGATCTTTCTTCACCAAAATTGT
TCCGATAGGAAGCATCTTATAACTCTGGAAATGGGATCAAGTAATGACCCTGAGAATCAAATGATGATAGAAGGAAATGTTGTTCAGAAAATGAAAATTGATCCG
GAGAGAGCTCGGTTTCCATGTTGCATTGTGTGGACACCTCTTCCTGTTATTTCCTGGCTCATTCCTTTCATTGGTCACATTGGTATTGGCAGAGAGGATGGAGTG
ATCTTGGACTTTGCAGGCCCCAATTTTGTTTGCGTGGACAACTTCACATTTGGAGCAGTCGCACGGTATCTTCAAATCAACACAGACAAGTGTTGCATCTCAACT
CATAGAAGTGAGGATGAATTCAGGGAAGTTGATAATGGTAGAGAAATATCAACATGGGATGATGCACTGCGGAGGAGCACTCAAGAATTCCAACACCGAGCCTAC
AATCTCTTAACTTGCAATTGTCATTCCTTTGTTGCTAACAATCTGAACAGACTTGGGTTTGTCACAGGTGGATGGAATGTGGTAAACCTTGCTGCTCTGATGTTT
CTCAAGGGTCGGTGGGTCAGTAAAGGAGCTGTGATCCGGACGTTCTTACCATTTGGTGTGGTATTCAGTATAGGAGTTGCAATGGTGGGTACTACATTCCTAACT
TTCTTGGCATTCTTCACTTTCTTCCTGGTTGGTTGGTTCGTTCTTGGTACTTATGTCTTCAAAAATTTGGTTCAGTTGGTGCAGAGGAAGAGTGGGGAGTGGCGT
TATAAGGCGTGGCCGGTCCACTTCGTCCCTTTCGTCAACATCATCGTCACATTTCGCATTAACTCTTTTCCTCCCTTTCTCTCTGCCATTGCGGAGCCAAACCCA
AGCATGACCAGCTCCTCCGACTCCGCTCGTAAGGCTTTAAGTAAGATTGCTTGCAATCGGCTTCAGAAGGAACTGGTCGAGTGGCAGGTTAACCCTCCCGCTGGT
TTTAAACACAAGGTTACCGATAATCTCCAGAGATGGGTGATTGAAGTCAACGGAGCTCCGGGAACTCTCTATGCAAATGAAACCTACCAGCTTCAGGTGGACTTC
CCTGAGCATTACCCAATGGAAGCCCCACAGGTTATATTTCTGCATCCAGCCCCTCTTCATCCTCATATCTATAGCAATGGTCACATTTGTCTAGATATTTTATAT
GATTCATGGTCGCCTGCAATGACTGTAAGTTCTATCTGTATCAGCATTCTCTCCATGTTGTCGAGCTCGACAGCAAAGCAACGCCCTGACGATAACGACCGTTAT
GTAAAGAATTGTAGGAATGGAAGATCCCCGAAAGAGACGAGGTGGTGGTTCCATGACGATAAGGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATAATCAGAGCATAGAGAAAGGGAAAGGGCTCAGAGAAGAAAAACAGCAACAGCAACAGCAAGAGGAGGAAGAAGCAGCAGCAGCAGCATATGAGTGGATATGGG
ACTTTTGTGGTGTATTTAAGTTAGCACTTCGCCCCTTCCCCCCACTGCGCAACAAAGCTCATGGCGGCGTTGCAGACTTCACTTCAGTTTTAGACAGAGAGAGAA
AAATACCCTTTAATGTATTAGAGAGACAGAGAGACAGAGAGAGACAGAGAGATTTCAGAATCTGATTCCCAATTCGACCTCTTTTCTACCTTCCCCCCTTTTTTT
TTTCTCTTGTAGTACGAAGAATTTGATTAAGAATTTCGAGAATTTGAGAAGGAATAGTATCTCCGGTGGAAATATGGCCGGTTTTTTCCCACTAGGCGGCGGAAG
AGAACCCAATTATCACCTTCCCACCACCACCACCACCACCACGGACGGATTATTTTGGTACAGAAATTATGAGAGCCTTGGAATTTGGCAGCAACAGCAGGTGCA
GCAGCAAGCGGGAGAAGGGTTTGTTTACTCGGGCGATGAATCGCCTCCAAGATCGTCGTTGGTGATGCTGAGATCCGGCAGAAACGGGGGAGGGCAAGTAATAAG
CTGCCAAGATTGTGGAAATCAAGCCAAAAAGGATTGCCTTCACATGCGATGTAGAACTTGCTGTAAAAGTCGTGGCTTTGACTGTGAAACCCACGTCAAAAGTAC
TTGGGTTCCGGCCTCCAAACGCCGTGAGCGACACCTCCGCAGCGACGGCACTAATCTCAAACGACCTCGAGACAACACCGCCGCTTCCTCAGGGTTAGAAATGAG
GAATTTTCCGGTGGAAGTGAGCTCAACGGCGGTGTTTCGGTGCGTGCGAATGACAACGTTGGACGAAACCAACGACCAATTTGCTTACCAAACAGCCGTCAACAT
CGGAGGCCATACCTTCAAGGGCATTCTTTACGACCACGGCCCTGAACAACAACAACAACCACCACCACCACCACCCAACTCCGCCTCCCCCGACGGTGGCGCCCT
CCTCATCACCGCCCCCTCCACCACCATGGAATTGCCACCCATCAGCGCCGCATTGCTCGATCCTCCTCCGCCGTACCCAGCTCCTCTGAACACCTACGTCGCCGC
CGTGTACCAGAGATGCCTCAAAGTGCAATTCAATGTGTCTGTAGGTAGCAGATTTCAGAGCTTTTCAATTCCAAAATCTTCAAGATCTTTCAAATTTGGGCTTGT
GGGCGGCGGAAGAGTCGTCGCCGGCAGTGGATACGTCTTGGTCGTTCACACGATCTTTCTTCACCAAAATTGTTCCGATAGGAAGCATCTTATAACTCTGGAAAT
GGGATCAAGTAATGACCCTGAGAATCAAATGATGATAGAAGGAAATGTTGTTCAGAAAATGAAAATTGATCCGGAGAGAGCTCGGTTTCCATGTTGCATTGTGTG
GACACCTCTTCCTGTTATTTCCTGGCTCATTCCTTTCATTGGTCACATTGGTATTGGCAGAGAGGATGGAGTGATCTTGGACTTTGCAGGCCCCAATTTTGTTTG
CGTGGACAACTTCACATTTGGAGCAGTCGCACGGTATCTTCAAATCAACACAGACAAGTGTTGCATCTCAACTCATAGAAGTGAGGATGAATTCAGGGAAGTTGA
TAATGGTAGAGAAATATCAACATGGGATGATGCACTGCGGAGGAGCACTCAAGAATTCCAACACCGAGCCTACAATCTCTTAACTTGCAATTGTCATTCCTTTGT
TGCTAACAATCTGAACAGACTTGGGTTTGTCACAGGTGGATGGAATGTGGTAAACCTTGCTGCTCTGATGTTTCTCAAGGGTCGGTGGGTCAGTAAAGGAGCTGT
GATCCGGACGTTCTTACCATTTGGTGTGGTATTCAGTATAGGAGTTGCAATGGTGGGTACTACATTCCTAACTTTCTTGGCATTCTTCACTTTCTTCCTGGTTGG
TTGGTTCGTTCTTGGTACTTATGTCTTCAAAAATTTGGTTCAGTTGGTGCAGAGGAAGAGTGGGGAGTGGCGTTATAAGGCGTGGCCGGTCCACTTCGTCCCTTT
CGTCAACATCATCGTCACATTTCGCATTAACTCTTTTCCTCCCTTTCTCTCTGCCATTGCGGAGCCAAACCCAAGCATGACCAGCTCCTCCGACTCCGCTCGTAA
GGCTTTAAGTAAGATTGCTTGCAATCGGCTTCAGAAGGAACTGGTCGAGTGGCAGGTTAACCCTCCCGCTGGTTTTAAACACAAGGTTACCGATAATCTCCAGAG
ATGGGTGATTGAAGTCAACGGAGCTCCGGGAACTCTCTATGCAAATGAAACCTACCAGCTTCAGGTGGACTTCCCTGAGCATTACCCAATGGAAGCCCCACAGGT
TATATTTCTGCATCCAGCCCCTCTTCATCCTCATATCTATAGCAATGGTCACATTTGTCTAGATATTTTATATGATTCATGGTCGCCTGCAATGACTGTAAGTTC
TATCTGTATCAGCATTCTCTCCATGTTGTCGAGCTCGACAGCAAAGCAACGCCCTGACGATAACGACCGTTATGTAAAGAATTGTAGGAATGGAAGATCCCCGAA
AGAGACGAGGTGGTGGTTCCATGACGATAAGGTGTAACAACGTAAGATCTTCCATTGTTATGCCTGTGGCTTCCCTTGTTTGTAAGGTGAAAGAAGTAGAAAGTG
ATTATGGAAAAAGAAAACCAAGTAAAGTGGTAAGGCCTGGCATTTGTAAAGGAAGATCAATTTATGTTTCTTACTAATGTCTAAAGAACAACTTCTCTTGTCCTT
TCTTGGAGGTGGGTTATCCTTCCTGGATGAGAACCTCTTCTTAACAAATTTATAAATCATCAGTAATGCCTCCTTCCTATTACATCACACTGTGTCTTTATATAG
TTTCAGTGAATATTACGATTTTTTTATAAATAAATCTTCATTGGTCGTAAATTTCAAATACTTAA
Protein sequenceShow/hide protein sequence
MAGFFPLGGGREPNYHLPTTTTTTTDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSR
GFDCETHVKSTWVPASKRRERHLRSDGTNLKRPRDNTAASSGLEMRNFPVEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPP
PNSASPDGGALLITAPSTTMELPPISAALLDPPPPYPAPLNTYVAAVYQRCLKVQFNVSVGSRFQSFSIPKSSRSFKFGLVGGGRVVAGSGYVLVVHTIFLHQNC
SDRKHLITLEMGSSNDPENQMMIEGNVVQKMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVARYLQINTDKCCIST
HRSEDEFREVDNGREISTWDDALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFVTGGWNVVNLAALMFLKGRWVSKGAVIRTFLPFGVVFSIGVAMVGTTFLT
FLAFFTFFLVGWFVLGTYVFKNLVQLVQRKSGEWRYKAWPVHFVPFVNIIVTFRINSFPPFLSAIAEPNPSMTSSSDSARKALSKIACNRLQKELVEWQVNPPAG
FKHKVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILSMLSSSTAKQRPDDNDRY
VKNCRNGRSPKETRWWFHDDKV