; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G008320 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G008320
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description40S ribosomal protein SA
Genome locationCmo_Chr04:4151579..4153358
RNA-Seq ExpressionCmoCh04G008320
SyntenyCmoCh04G008320
Gene Ontology termsGO:0000028 - ribosomal small subunit assembly (biological process)
GO:0002181 - cytoplasmic translation (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001865 - Ribosomal protein S2
IPR005707 - Ribosomal protein S2, eukaryotic/archaeal
IPR018130 - Ribosomal protein S2, conserved site
IPR023591 - Ribosomal protein S2, flavodoxin-like domain superfamily
IPR027498 - Ribosomal protein S2, eukaryotic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600605.1 40S ribosomal protein SA, partial [Cucurbita argyrosperma subsp. sororia]1.1e-16999.34Show/hide
Query:  MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM

Query:  VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADRWVADAQWDAPDMVP--AAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPPAPLLEAGAP
        VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADRWVADAQWDAPDMVP  AAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPPAPLLEAGAP
Subjt:  VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADRWVADAQWDAPDMVP--AAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPPAPLLEAGAP

Query:  PAAS
        PAAS
Subjt:  PAAS

KAG7031241.1 40S ribosomal protein SA, partial [Cucurbita argyrosperma subsp. argyrosperma]9.4e-16998.68Show/hide
Query:  MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM

Query:  VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADRWVADAQWDAPDMVP--AAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPPAPLLEAGAP
        VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADRWVADAQWDAPDMVP  AAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPPAPLLEAG P
Subjt:  VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADRWVADAQWDAPDMVP--AAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPPAPLLEAGAP

Query:  PAAS
        PAA+
Subjt:  PAAS

XP_022942879.1 40S ribosomal protein SA-like [Cucurbita moschata]3.4e-171100Show/hide
Query:  MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM

Query:  VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADRWVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPPAPLLEAGAPPA
        VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADRWVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPPAPLLEAGAPPA
Subjt:  VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADRWVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPPAPLLEAGAPPA

Query:  AS
        AS
Subjt:  AS

XP_022982113.1 40S ribosomal protein SA-like [Cucurbita maxima]1.9e-16999.01Show/hide
Query:  MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM

Query:  VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADRWVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPPAPLLEAGAPPA
        VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADRWVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWD AEAPPAPL E GAPPA
Subjt:  VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADRWVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPPAPLLEAGAPPA

Query:  AS
        AS
Subjt:  AS

XP_023554616.1 40S ribosomal protein SA-like [Cucurbita pepo subsp. pepo]2.7e-16898.36Show/hide
Query:  MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM

Query:  VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADRWVADAQWDAPDMVP---AAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPPAPLLEAGA
        VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADRWVADAQWDAPDMVP   AAAAAAAPVSNVEWALEPVALG AADGWDVAEAPPAPLLEAG 
Subjt:  VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADRWVADAQWDAPDMVP---AAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPPAPLLEAGA

Query:  PPAAS
        PPAAS
Subjt:  PPAAS

TrEMBL top hitse value%identityAlignment
A0A1S3BXR8 40S ribosomal protein SA4.7e-15089.37Show/hide
Query:  MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MATG EQRQL+QKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPG+KWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM

Query:  VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADRWVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPPAPLLEAGAPPA
        VDLFFYREPEE KEKEEE+AVAPPDYGIADFG+APL  D+WV DAQWDA ++ P AAAA+  VSNVEWA EPV   GAADGW VA  PPAP LEA APP+
Subjt:  VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADRWVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPPAPLLEAGAPPA

Query:  A
        +
Subjt:  A

A0A5A7TNP4 40S ribosomal protein SA4.7e-15089.37Show/hide
Query:  MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MATG EQRQL+QKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPG+KWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM

Query:  VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADRWVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPPAPLLEAGAPPA
        VDLFFYREPEE KEKEEE+AVAPPDYGIADFG+APL  D+WV DAQWDA ++ P AAAA+  VSNVEWA EPV   GAADGW VA  PPAP LEA APP+
Subjt:  VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADRWVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPPAPLLEAGAPPA

Query:  A
        +
Subjt:  A

A0A6J1C6Q9 40S ribosomal protein SA6.6e-15291.39Show/hide
Query:  MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MATGT QRQL+QKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTW+KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT+R GHKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM

Query:  VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADRWVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDVAEA-PPAPLLEAGAPP
        VDLFFYREPEEAKE EEE+AVAPPDYGIADFGAAPL  D+W  DAQW A D+VP  AAAAAP SNVEWA EPVAL GAADGWD A A PPAP +EAGAPP
Subjt:  VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADRWVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDVAEA-PPAPLLEAGAPP

Query:  AA
        A+
Subjt:  AA

A0A6J1FSL7 40S ribosomal protein SA1.7e-171100Show/hide
Query:  MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM

Query:  VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADRWVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPPAPLLEAGAPPA
        VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADRWVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPPAPLLEAGAPPA
Subjt:  VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADRWVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPPAPLLEAGAPPA

Query:  AS
        AS
Subjt:  AS

A0A6J1J410 40S ribosomal protein SA9.1e-17099.01Show/hide
Query:  MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM

Query:  VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADRWVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPPAPLLEAGAPPA
        VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADRWVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWD AEAPPAPL E GAPPA
Subjt:  VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADRWVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPPAPLLEAGAPPA

Query:  AS
        AS
Subjt:  AS

SwissProt top hitse value%identityAlignment
A5BUU4 40S ribosomal protein SA5.1e-12576.92Show/hide
Query:  MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MAT T  R L+QKE DIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQ+AARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM
        IAGRHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMR T+ PGHKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM

Query:  VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAP---LVADRW---VADA-QWDAPDMVPAAAAAAAPVSN-VEWALEPVALGGAADGWDVAEAPPA--
        VDLFFYREPEE KE+E ++ VA PDYGI D+ A     L    W   + DA QW A D+   A   A P SN  + A  P A+  A DGWD A APP   
Subjt:  VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAP---LVADRW---VADA-QWDAPDMVPAAAAAAAPVSN-VEWALEPVALGGAADGWDVAEAPPA--

Query:  --PLLEAGAPPA
          P++E   PPA
Subjt:  --PLLEAGAPPA

O22518 40S ribosomal protein SA6.2e-12377.85Show/hide
Query:  ATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAI
        A     RQL+QKEADIQMMLAA+VHLGTKNC+FQMERY+FKRRNDGIYIINLGKTWEKLQ+AARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAI
Subjt:  ATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAI

Query:  AGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVMV
        AGRHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT+RPG KWDVMV
Subjt:  AGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVMV

Query:  DLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVAD-RWVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPP
        DLFFYREPEEAK++EEE+A A  DY I DF A  + AD +W         D VP    A   V  V W     A   A   W  A  PP
Subjt:  DLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVAD-RWVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPP

O65751 40S ribosomal protein SA1.5e-12176.16Show/hide
Query:  MATGT-EQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAH
        MAT T   RQLTQKEADIQMMLAA+VHLGTKNCNFQMERY+FKRRNDGIYIINLGKTW+KL +AAR+IVAIEN QDIIVQSARPYGQRAVLKFAQYTGAH
Subjt:  MATGT-EQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDV
        AIAGRHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPM YVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT+RPG KWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDV

Query:  MVDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVAD-RWVA--DAQWD--APDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPPAPLLE
        MVDLFFYREPEEAK+ EE++ VA PDY IADF  + + +D +W A  D  W+   P  +PA  A       V WA  P A+ G    W  A  PP  +  
Subjt:  MVDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVAD-RWVA--DAQWD--APDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPPAPLLE

Query:  AG
        AG
Subjt:  AG

O80377 40S ribosomal protein SA4.9e-12076.27Show/hide
Query:  MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MA+G   R+L+  EADIQMM AAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKL +AARVIV+IENPQDIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM
        IAGRHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRG +  GHKW+VM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM

Query:  VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPL-VADRW--VADAQWDAPDMVPAAAAAAAPVSNVEWA-LEPVALGGAADGWDVAEAPPAP
        VDLFFYREPEE K++EEE  +   DY +AD+ AAP+  AD+W  + DAQW    + PA +A  A      W    P+    A DGWD A APP P
Subjt:  VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPL-VADRW--VADAQWDAPDMVPAAAAAAAPVSNVEWA-LEPVALGGAADGWDVAEAPPAP

Q9ZSR8 40S ribosomal protein SA4.3e-11674.11Show/hide
Query:  QLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPG
        QL+QKEADI+MM AAEVHLGTKNCN+QMERYVFKRRNDGIYI NLGKTWEKL MAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA+AIAGRHTPG
Subjt:  QLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPG

Query:  TFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVMVDLFFYRE
        TFTNQ+QTSF+EPRLLILTDPRTDHQPIKEGALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGT+RP  KWDVMVDLFFYRE
Subjt:  TFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVMVDLFFYRE

Query:  PEEAKEKEEEQAVAPPDYGI--ADFGAAPLVADRWVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDVAEAP
        PEE K ++E++     ++G+   ++G         + DA W      P +AA AA   N     +  A   A  GWD A  P
Subjt:  PEEAKEKEEEQAVAPPDYGI--ADFGAAPLVADRWVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDVAEAP

Arabidopsis top hitse value%identityAlignment
AT1G72370.1 40s ribosomal protein SA5.8e-11673.06Show/hide
Query:  QLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPG
        QL+QKEAD++MM AAEVHLGTKNCN+QMERYVFKRRNDGIYI NLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA+AIAGRHTPG
Subjt:  QLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPG

Query:  TFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVMVDLFFYRE
        TFTNQ+QTSF+EPRLLILTDPRTDHQPIKEGALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGT+  G KWDVMVDLFFYRE
Subjt:  TFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVMVDLFFYRE

Query:  PEEAKEKEEEQAVAPPDYGIADFGAAPLV-ADRW----VADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPPAPLLEAGAPPA
        PEE K ++E++A    +YG        +V  D+W    + DA W      P +AA AA      W+    A   A  GW+ A APP     +GAP A
Subjt:  PEEAKEKEEEQAVAPPDYGIADFGAAPLV-ADRW----VADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPPAPLLEAGAPPA

AT1G72370.2 40s ribosomal protein SA7.5e-11672.73Show/hide
Query:  QLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPG
        QL+QKEAD++MM AAEVHLGTKNCN+QMERYVFKRRNDGIYI NLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA+AIAGRHTPG
Subjt:  QLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPG

Query:  TFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVMVDLFFYRE
        TFTNQ+QTSF+EPRLLILTDPRTDHQPIKEGALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGT+  G KWDVMVDLFFYRE
Subjt:  TFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVMVDLFFYRE

Query:  PEEAKEKEEEQAVAPPDYGIADFGAAPLV-ADRW----VADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPPAPLLEAGAPPA
        PEE K ++E++A    +YG        +V  D+W    + DA W      P +AA AA      W+        A  GW+ A APP     +GAP A
Subjt:  PEEAKEKEEEQAVAPPDYGIADFGAAPLV-ADRW----VADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPPAPLLEAGAPPA

AT3G04770.1 40s ribosomal protein SA B1.2e-10288.38Show/hide
Query:  TEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGR
        T  RQ+++KEADIQMML+A+VHLGTKNCN+QMERYVFKRR+DGIYIINLGKTW+KLQMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTG +AIAGR
Subjt:  TEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGR

Query:  HTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVMVD
        HTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARMVLQMRGT+    KWDVMV+
Subjt:  HTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVMVD

AT3G04770.2 40s ribosomal protein SA B4.9e-11571.72Show/hide
Query:  TEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGR
        T  RQ+++KEADIQMML+A+VHLGTKNCN+QMERYVFKRR+DGIYIINLGKTW+KLQMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTG +AIAGR
Subjt:  TEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGR

Query:  HTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVMVDLF
        HTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARMVLQMRGT+    KWDVMVDLF
Subjt:  HTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVMVDLF

Query:  FYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADRW----VADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPPA
        FYREPEEAK++ +E+A    DYG+          D+W    ++DA W      P +AA A  V+              A GW+ A  P A
Subjt:  FYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADRW----VADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPPA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACTGGAACAGAACAGCGTCAACTCACGCAGAAGGAGGCGGACATTCAGATGATGTTGGCCGCTGAGGTTCATCTAGGTACTAAAAACTGCAATTTCCAG
ATGGAGCGATACGTTTTCAAGCGCCGGAATGATGGAATCTACATTATTAACCTGGGTAAAACATGGGAGAAACTTCAGATGGCTGCTAGAGTTATTGTGGCTATC
GAGAATCCTCAAGACATTATTGTTCAGTCTGCCAGGCCTTATGGTCAGAGAGCTGTTTTGAAGTTTGCTCAATACACTGGTGCTCATGCAATTGCTGGGAGGCAC
ACCCCTGGAACATTCACCAACCAGCTTCAGACCTCATTCAACGAGCCACGTCTTCTGATACTTACTGATCCTAGAACTGATCATCAGCCCATCAAGGAAGGTGCC
CTTGGAAACATTCCTACAATTGCCTTTTGCGACACTGATTCACCAATGCGGTATGTTGACATTGGGATTCCAGCTAATAACAAGGGGAAACACAGCATAGGATGT
CTATTCTGGCTTCTTGCGAGGATGGTTTTGCAAATGCGTGGAACAGTTCGTCCTGGGCACAAATGGGACGTGATGGTGGATTTGTTTTTCTACCGGGAGCCTGAG
GAGGCAAAGGAGAAAGAGGAAGAACAGGCTGTTGCGCCACCAGATTATGGCATTGCAGATTTTGGTGCTGCTCCGCTGGTAGCGGATCGATGGGTTGCTGATGCT
CAGTGGGATGCTCCTGATATGGTTCCAGCTGCTGCTGCTGCTGCTGCTCCAGTTTCTAATGTGGAGTGGGCCCTAGAGCCAGTCGCTCTTGGAGGAGCAGCAGAT
GGATGGGATGTTGCAGAAGCACCACCAGCACCTTTACTGGAAGCTGGTGCACCTCCAGCCGCCAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGACTGGAACAGAACAGCGTCAACTCACGCAGAAGGAGGCGGACATTCAGATGATGTTGGCCGCTGAGGTTCATCTAGGTACTAAAAACTGCAATTTCCAG
ATGGAGCGATACGTTTTCAAGCGCCGGAATGATGGAATCTACATTATTAACCTGGGTAAAACATGGGAGAAACTTCAGATGGCTGCTAGAGTTATTGTGGCTATC
GAGAATCCTCAAGACATTATTGTTCAGTCTGCCAGGCCTTATGGTCAGAGAGCTGTTTTGAAGTTTGCTCAATACACTGGTGCTCATGCAATTGCTGGGAGGCAC
ACCCCTGGAACATTCACCAACCAGCTTCAGACCTCATTCAACGAGCCACGTCTTCTGATACTTACTGATCCTAGAACTGATCATCAGCCCATCAAGGAAGGTGCC
CTTGGAAACATTCCTACAATTGCCTTTTGCGACACTGATTCACCAATGCGGTATGTTGACATTGGGATTCCAGCTAATAACAAGGGGAAACACAGCATAGGATGT
CTATTCTGGCTTCTTGCGAGGATGGTTTTGCAAATGCGTGGAACAGTTCGTCCTGGGCACAAATGGGACGTGATGGTGGATTTGTTTTTCTACCGGGAGCCTGAG
GAGGCAAAGGAGAAAGAGGAAGAACAGGCTGTTGCGCCACCAGATTATGGCATTGCAGATTTTGGTGCTGCTCCGCTGGTAGCGGATCGATGGGTTGCTGATGCT
CAGTGGGATGCTCCTGATATGGTTCCAGCTGCTGCTGCTGCTGCTGCTCCAGTTTCTAATGTGGAGTGGGCCCTAGAGCCAGTCGCTCTTGGAGGAGCAGCAGAT
GGATGGGATGTTGCAGAAGCACCACCAGCACCTTTACTGGAAGCTGGTGCACCTCCAGCCGCCAGTTAG
Protein sequenceShow/hide protein sequence
MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRH
TPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVMVDLFFYREPE
EAKEKEEEQAVAPPDYGIADFGAAPLVADRWVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPPAPLLEAGAPPAAS