; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G008370 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G008370
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionATP-dependent DNA helicase DDM1
Genome locationCmo_Chr04:4166756..4169460
RNA-Seq ExpressionCmoCh04G008370
SyntenyCmoCh04G008370
Gene Ontology termsGO:0016575 - histone deacetylation (biological process)
GO:0044030 - regulation of DNA methylation (biological process)
GO:0070823 - HDA1 complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0008094 - DNA-dependent ATPase activity (molecular function)
InterPro domainsIPR021006 - HDA1 complex subunit 2/3
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600610.1 ATP-dependent DNA helicase DDM1, partial [Cucurbita argyrosperma subsp. sororia]1.8e-10469.74Show/hide
Query:  KSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSEKGSGHAFKGKLNNLMVQLRKNCNHPDLLESVFDKSSAYPPVEQIVEQCGKFCLLDRLL
        KSDVELMLPRKKEI IYANMTEYQKNFQEHLINKTLENHLSEKGSGHAFKGKLNNLMVQLRKNCNHPDLLESVFDKSS YPPVEQIVEQCGKFCLLDRLL
Subjt:  KSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSEKGSGHAFKGKLNNLMVQLRKNCNHPDLLESVFDKSSAYPPVEQIVEQCGKFCLLDRLL

Query:  TWLFARKHKVLVFSQWTKILDLMEYYFSEKGFEVCRIDGGVKLDERKRQIQ-------------------------------------------EFNDGS
        TWLFARKHKVL+FSQWTKILDLMEYYFSEKGFEVCRIDGGVKLDERKR+                                               N   
Subjt:  TWLFARKHKVLVFSQWTKILDLMEYYFSEKGFEVCRIDGGVKLDERKRQIQ-------------------------------------------EFNDGS

Query:  SKYRIFI-FKHAGWWS-----------------------GFATAQSIEGRILKRAFSKLKLEHVVIEKGQFHHERTKADSGAAVEADISDDDLERILDRS
          Y++ + + +   W+                        FATAQSIEGRILKRAFSKLKLEHVVIEKGQFHHERTKADSGAAVEADISDDDLERILDRS
Subjt:  SKYRIFI-FKHAGWWS-----------------------GFATAQSIEGRILKRAFSKLKLEHVVIEKGQFHHERTKADSGAAVEADISDDDLERILDRS

Query:  DLVV
        DLVV
Subjt:  DLVV

KAG7015341.1 ATP-dependent DNA helicase DDM1 [Cucurbita argyrosperma subsp. argyrosperma]1.4e-9666.78Show/hide
Query:  MKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSEKGSGHAFKGKLNNLMVQLRKNCNHPDLLESVFDKSSAYPPVEQIVEQCGKFCLLDRL
        MKSDVELMLPRKKEII+YA MTE QKNFQEHLINKTLE+HLSEKGSGH  KGKLNNLMVQLRKNCNHPDLLESVFD+S  YPPVEQIVEQCGKF LLDRL
Subjt:  MKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSEKGSGHAFKGKLNNLMVQLRKNCNHPDLLESVFDKSSAYPPVEQIVEQCGKFCLLDRL

Query:  LTWLFARKHKVLVFSQWTKILDLMEYYFSEKGFEVCRIDGGVKLDERKRQIQEFNDGSSKYRIFIFKHAGWWSG--------------------------
        LT L ARKHKVL+FSQWTKILD+M+YYFSEKGFEVCRIDG VKLDERKRQIQEFND +S YRIFI        G                          
Subjt:  LTWLFARKHKVLVFSQWTKILDLMEYYFSEKGFEVCRIDGGVKLDERKRQIQEFNDGSSKYRIFIFKHAGWWSG--------------------------

Query:  ---------------FATAQSIEGRILKRAFSKLKLEHVVIEKGQFHHERTKADSGAAVE--------------------ADISDDDLERILDRSDLV
                        ATAQS+EGRIL RAFSKLKLEHVVIEKGQFH ERTK +SGA +E                     DISD DLERILDRSDL+
Subjt:  ---------------FATAQSIEGRILKRAFSKLKLEHVVIEKGQFHHERTKADSGAAVE--------------------ADISDDDLERILDRSDLV

XP_011653137.1 ATP-dependent DNA helicase DDM1 [Cucumis sativus]4.8e-9766.89Show/hide
Query:  MKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSEKGSGHAFKGKLNNLMVQLRKNCNHPDLLESVFDKSSAYPPVEQIVEQCGKFCLLDRL
        MKSDVELMLPRKKEII+YANMTEYQKNFQEHL+NKTLENHL EKGSG  FKGKLNNLMVQLRKNCNHPDLLESVFD S AYPPVEQ+VEQCGKF LLDRL
Subjt:  MKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSEKGSGHAFKGKLNNLMVQLRKNCNHPDLLESVFDKSSAYPPVEQIVEQCGKFCLLDRL

Query:  LTWLFARKHKVLVFSQWTKILDLMEYYFSEKGFEVCRIDGGVKLDERKRQIQEFNDGSSKYRIFIFKHAGWWSG--------------------------
        LT LF RKHKVL+FSQWTKILD+M+YYFSEKGFEVCRIDG VKLDERKRQIQEFND +S YRIFI        G                          
Subjt:  LTWLFARKHKVLVFSQWTKILDLMEYYFSEKGFEVCRIDGGVKLDERKRQIQEFNDGSSKYRIFIFKHAGWWSG--------------------------

Query:  ---------------FATAQSIEGRILKRAFSKLKLEHVVIEKGQFHHERTKADSGAAVE--------------------ADISDDDLERILDRSDLVV
                        ATAQSIEGRILKRAFSKLKLEHVVIEKGQFH ERTK  +   VE                     +ISD DLERILDRSDL+V
Subjt:  ---------------FATAQSIEGRILKRAFSKLKLEHVVIEKGQFHHERTKADSGAAVE--------------------ADISDDDLERILDRSDLVV

XP_022136852.1 ATP-dependent DNA helicase DDM1 [Momordica charantia]6.3e-9762.9Show/hide
Query:  MKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSEKGSGHAFKGKLNNLMVQLRKNCNHPDLLESVFDKSSAYPPVEQIVEQCGKFCLLDRL
        MKSDVE+MLPRKKEIIIYA++TEYQKNFQ+HL+NKTLE HL EKGSGH FKGKLNNLM+QLRKNCNHPDLLES FD S  YPP+EQIVEQCGKF LLDRL
Subjt:  MKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSEKGSGHAFKGKLNNLMVQLRKNCNHPDLLESVFDKSSAYPPVEQIVEQCGKFCLLDRL

Query:  LTWLFARKHKVLVFSQWTKILDLMEYYFSEKGFEVCRIDGGVKLDERKRQIQEFNDGSSKYRIFIFKHAGWWSG--------------------------
        LT LFARKHKVL+FSQWTK+LD+MEYYFSEKGFEVCRIDGGVKLDER+RQI+EFN+ +S YRIFI        G                          
Subjt:  LTWLFARKHKVLVFSQWTKILDLMEYYFSEKGFEVCRIDGGVKLDERKRQIQEFNDGSSKYRIFIFKHAGWWSG--------------------------

Query:  ---------------FATAQSIEGRILKRAFSKLKLEHVVIEKGQFHHERTKADSGAAVE--------------------ADISDDDLERILDRSDLVVH
                        ATAQS+EGRILKRAFSKLKLEHVVIEKGQFH ER+K +SGA VE                     +ISD DLERILDRSDL++ 
Subjt:  ---------------FATAQSIEGRILKRAFSKLKLEHVVIEKGQFHHERTKADSGAAVE--------------------ADISDDDLERILDRSDLVVH

Query:  LVQRMRKLKL
            + K K+
Subjt:  LVQRMRKLKL

XP_038877277.1 ATP-dependent DNA helicase DDM1 [Benincasa hispida]7.9e-10068.12Show/hide
Query:  MKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSEKGSGHAFKGKLNNLMVQLRKNCNHPDLLESVFDKSSAYPPVEQIVEQCGKFCLLDRL
        MKSDVELMLPRKKEIIIYANMTEYQKNFQEHL+NKTLENHLSEKGSGH FKGKLNNLMVQLRKNCNHPDLLES FD+S  YPPVEQ+VEQCGKF LLDRL
Subjt:  MKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSEKGSGHAFKGKLNNLMVQLRKNCNHPDLLESVFDKSSAYPPVEQIVEQCGKFCLLDRL

Query:  LTWLFARKHKVLVFSQWTKILDLMEYYFSEKGFEVCRIDGGVKLDERKRQIQEFNDGSSKYRIFIFKHAGWWSG--------------------------
        LT LFARKHKVL+FSQWTKILD+M+YYFSEKG+EVCRIDGGVKLDERKRQIQEFND +S YRIFI        G                          
Subjt:  LTWLFARKHKVLVFSQWTKILDLMEYYFSEKGFEVCRIDGGVKLDERKRQIQEFNDGSSKYRIFIFKHAGWWSG--------------------------

Query:  ---------------FATAQSIEGRILKRAFSKLKLEHVVIEKGQFHHERTKADSGAAVE--------------------ADISDDDLERILDRSDLV
                        ATAQSIEGRILKRAFSKLKLEHVVIEKGQFH ERTK + G  VE                     DISD DLERILDRSDL+
Subjt:  ---------------FATAQSIEGRILKRAFSKLKLEHVVIEKGQFHHERTKADSGAAVE--------------------ADISDDDLERILDRSDLV

TrEMBL top hitse value%identityAlignment
A0A0A0KUD3 Uncharacterized protein2.3e-9766.89Show/hide
Query:  MKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSEKGSGHAFKGKLNNLMVQLRKNCNHPDLLESVFDKSSAYPPVEQIVEQCGKFCLLDRL
        MKSDVELMLPRKKEII+YANMTEYQKNFQEHL+NKTLENHL EKGSG  FKGKLNNLMVQLRKNCNHPDLLESVFD S AYPPVEQ+VEQCGKF LLDRL
Subjt:  MKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSEKGSGHAFKGKLNNLMVQLRKNCNHPDLLESVFDKSSAYPPVEQIVEQCGKFCLLDRL

Query:  LTWLFARKHKVLVFSQWTKILDLMEYYFSEKGFEVCRIDGGVKLDERKRQIQEFNDGSSKYRIFIFKHAGWWSG--------------------------
        LT LF RKHKVL+FSQWTKILD+M+YYFSEKGFEVCRIDG VKLDERKRQIQEFND +S YRIFI        G                          
Subjt:  LTWLFARKHKVLVFSQWTKILDLMEYYFSEKGFEVCRIDGGVKLDERKRQIQEFNDGSSKYRIFIFKHAGWWSG--------------------------

Query:  ---------------FATAQSIEGRILKRAFSKLKLEHVVIEKGQFHHERTKADSGAAVE--------------------ADISDDDLERILDRSDLVV
                        ATAQSIEGRILKRAFSKLKLEHVVIEKGQFH ERTK  +   VE                     +ISD DLERILDRSDL+V
Subjt:  ---------------FATAQSIEGRILKRAFSKLKLEHVVIEKGQFHHERTKADSGAAVE--------------------ADISDDDLERILDRSDLVV

A0A1S3BWZ3 ATP-dependent DNA helicase DDM18.9e-9766.78Show/hide
Query:  MKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSEKGSGHAFKGKLNNLMVQLRKNCNHPDLLESVFDKSSAYPPVEQIVEQCGKFCLLDRL
        MKSDVELMLPRKKEII+YA MTEYQKNFQEHL+NKTLENHLSEKGSG  FKGKLNNLMVQLRKNCNHPDLLESVFD+S  YPPVEQ+VEQCGKF LLDRL
Subjt:  MKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSEKGSGHAFKGKLNNLMVQLRKNCNHPDLLESVFDKSSAYPPVEQIVEQCGKFCLLDRL

Query:  LTWLFARKHKVLVFSQWTKILDLMEYYFSEKGFEVCRIDGGVKLDERKRQIQEFNDGSSKYRIFIFKHAGWWSG--------------------------
        LT LF RKHKVL+FSQWTKILD+M+YYFSEKGFEVCRIDG VKLDERKRQIQEFND +S YRIFI        G                          
Subjt:  LTWLFARKHKVLVFSQWTKILDLMEYYFSEKGFEVCRIDGGVKLDERKRQIQEFNDGSSKYRIFIFKHAGWWSG--------------------------

Query:  ---------------FATAQSIEGRILKRAFSKLKLEHVVIEKGQFHHERTKADSGAAVEAD--------------------ISDDDLERILDRSDLV
                        ATAQSIEGRILKRAFSKLKLEHVVIEKGQFH ERTK +    VE D                    ISD DLERILDRSDL+
Subjt:  ---------------FATAQSIEGRILKRAFSKLKLEHVVIEKGQFHHERTKADSGAAVEAD--------------------ISDDDLERILDRSDLV

A0A6J1C6L0 ATP-dependent DNA helicase DDM13.0e-9762.9Show/hide
Query:  MKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSEKGSGHAFKGKLNNLMVQLRKNCNHPDLLESVFDKSSAYPPVEQIVEQCGKFCLLDRL
        MKSDVE+MLPRKKEIIIYA++TEYQKNFQ+HL+NKTLE HL EKGSGH FKGKLNNLM+QLRKNCNHPDLLES FD S  YPP+EQIVEQCGKF LLDRL
Subjt:  MKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSEKGSGHAFKGKLNNLMVQLRKNCNHPDLLESVFDKSSAYPPVEQIVEQCGKFCLLDRL

Query:  LTWLFARKHKVLVFSQWTKILDLMEYYFSEKGFEVCRIDGGVKLDERKRQIQEFNDGSSKYRIFIFKHAGWWSG--------------------------
        LT LFARKHKVL+FSQWTK+LD+MEYYFSEKGFEVCRIDGGVKLDER+RQI+EFN+ +S YRIFI        G                          
Subjt:  LTWLFARKHKVLVFSQWTKILDLMEYYFSEKGFEVCRIDGGVKLDERKRQIQEFNDGSSKYRIFIFKHAGWWSG--------------------------

Query:  ---------------FATAQSIEGRILKRAFSKLKLEHVVIEKGQFHHERTKADSGAAVE--------------------ADISDDDLERILDRSDLVVH
                        ATAQS+EGRILKRAFSKLKLEHVVIEKGQFH ER+K +SGA VE                     +ISD DLERILDRSDL++ 
Subjt:  ---------------FATAQSIEGRILKRAFSKLKLEHVVIEKGQFHHERTKADSGAAVE--------------------ADISDDDLERILDRSDLVVH

Query:  LVQRMRKLKL
            + K K+
Subjt:  LVQRMRKLKL

A0A6J1EMP5 ATP-dependent DNA helicase DDM16.8e-9766.78Show/hide
Query:  MKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSEKGSGHAFKGKLNNLMVQLRKNCNHPDLLESVFDKSSAYPPVEQIVEQCGKFCLLDRL
        MKSDVELMLPRKKEII+YA MTE QKNFQEHLINKTLE+HLSEKGSGH  KGKLNNLMVQLRKNCNHPDLLESVFD+S  YPPVEQIVEQCGKF LLDRL
Subjt:  MKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSEKGSGHAFKGKLNNLMVQLRKNCNHPDLLESVFDKSSAYPPVEQIVEQCGKFCLLDRL

Query:  LTWLFARKHKVLVFSQWTKILDLMEYYFSEKGFEVCRIDGGVKLDERKRQIQEFNDGSSKYRIFIFKHAGWWSG--------------------------
        LT L ARKHKVL+FSQWTKILD+M+YYFSEKGFEVCRIDG VKLDERKRQIQEFND +S YRIFI        G                          
Subjt:  LTWLFARKHKVLVFSQWTKILDLMEYYFSEKGFEVCRIDGGVKLDERKRQIQEFNDGSSKYRIFIFKHAGWWSG--------------------------

Query:  ---------------FATAQSIEGRILKRAFSKLKLEHVVIEKGQFHHERTKADSGAAVE--------------------ADISDDDLERILDRSDLV
                        ATAQS+EGRIL RAFSKLKLEHVVIEKGQFH ERTK +SGA +E                     DISD DLERILDRSDL+
Subjt:  ---------------FATAQSIEGRILKRAFSKLKLEHVVIEKGQFHHERTKADSGAAVE--------------------ADISDDDLERILDRSDLV

A0A6J1JAC1 ATP-dependent DNA helicase DDM16.8e-9765.16Show/hide
Query:  MKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSEKGSGHAFKGKLNNLMVQLRKNCNHPDLLESVFDKSSAYPPVEQIVEQCGKFCLLDRL
        MKSDVELMLPRKKEII+YA MTE QKNFQEHLINKTLE+HLSEKGSGH  KGKLNNLMVQLRKNCNHPDLLESVFD+S  YPPVEQIVEQCGKF LLDRL
Subjt:  MKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSEKGSGHAFKGKLNNLMVQLRKNCNHPDLLESVFDKSSAYPPVEQIVEQCGKFCLLDRL

Query:  LTWLFARKHKVLVFSQWTKILDLMEYYFSEKGFEVCRIDGGVKLDERKRQIQEFNDGSSKYRIFIFKHAGWWSG--------------------------
        LT L ARKHKVL+FSQWTKILD+M+YYFSEKGFEVCRIDG VKLDERKRQIQEFND +S YRIFI        G                          
Subjt:  LTWLFARKHKVLVFSQWTKILDLMEYYFSEKGFEVCRIDGGVKLDERKRQIQEFNDGSSKYRIFIFKHAGWWSG--------------------------

Query:  ---------------FATAQSIEGRILKRAFSKLKLEHVVIEKGQFHHERTKADSGAAVE--------------------ADISDDDLERILDRSDLVVH
                        ATAQS+EGRIL RAFSKLKLEHVVIEKGQFH ERTK +SGA +E                     DISD DLERILDRSDL+  
Subjt:  ---------------FATAQSIEGRILKRAFSKLKLEHVVIEKGQFHHERTKADSGAAVE--------------------ADISDDDLERILDRSDLVVH

Query:  LVQRMRKLKL
              KLK+
Subjt:  LVQRMRKLKL

SwissProt top hitse value%identityAlignment
O16102 Chromodomain-helicase-DNA-binding protein 33.3e-2428.62Show/hide
Query:  MKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSEKGSGHAFKGKLNNLMVQLRKNCNHPDLLESVFDKSSAYP----PVEQIVEQCGKFCL
        +K+DV   +P K E I+   ++  QK F +H++ K  +  L++KG G      L N+M+ LRK CNHP L  S  ++++  P     +  + +  GK  L
Subjt:  MKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSEKGSGHAFKGKLNNLMVQLRKNCNHPDLLESVFDKSSAYP----PVEQIVEQCGKFCL

Query:  LDRLLTWLFARKHKVLVFSQWTKILDLMEYYFSEKGFEVCRIDGGVKLDERKRQIQEFNDGSSKYRIFIFKHAGWWSG----------------------
        L ++L  L A  H+VL+FSQ TK+L+++E++   +G++  RIDG +K D R++ I  FND  S++ +F+        G                      
Subjt:  LDRLLTWLFARKHKVLVFSQWTKILDLMEYYFSEKGFEVCRIDGGVKLDERKRQIQEFNDGSSKYRIFIFKHAGWWSG----------------------

Query:  -------------------FATAQSIEGRILKRAFSKLKLEHVVIEKGQFHHERTKADSGAAVEADISDDDLERIL
                           F T  S+E RI++ A  K+ L H+V+  G              +  + S D+LE IL
Subjt:  -------------------FATAQSIEGRILKRAFSKLKLEHVVIEKGQFHHERTKADSGAAVEADISDDDLERIL

O60264 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 55.6e-2428.77Show/hide
Query:  MKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSEKGSGHAFKGKLNNLMVQLRKNCNHPDLLESVFDKSSAYPPVE---QIVEQCGKFCLL
        +K+DVE  LP KKE+ IY  +++ Q+ +   ++ K ++       +G   K +L N+++QLRK CNHP L    FD +   PP      +V   GK  +L
Subjt:  MKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSEKGSGHAFKGKLNNLMVQLRKNCNHPDLLESVFDKSSAYPPVE---QIVEQCGKFCLL

Query:  DRLLTWLFARKHKVLVFSQWTKILDLMEYYFSEKGFEVCRIDGGVKLDERKRQIQEFND-GSSKYRIFIFKHAGW-----------------WS------
        D+LL  L  +  +VL+FSQ T++LD++E Y   + +E CR+DG    DER+  I  +N+  S+K+   +   AG                  W+      
Subjt:  DRLLTWLFARKHKVLVFSQWTKILDLMEYYFSEKGFEVCRIDGGVKLDERKRQIQEFND-GSSKYRIFIFKHAGW-----------------WS------

Query:  -----------------GFATAQSIEGRILKRAFSKLKLEHVVIEKGQFHHERTK---------------ADSGAAVEADISDDDLERILDR
                          F T  ++E RI++RA  KL+L+ +VI++G+   +                      A+ E++I+D+D++ IL+R
Subjt:  -----------------GFATAQSIEGRILKRAFSKLKLEHVVIEKGQFHHERTK---------------ADSGAAVEADISDDDLERILDR

Q7G8Y3 Probable chromatin-remodeling complex ATPase chain2.4e-2731.23Show/hide
Query:  MKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSEKGSGHAFKGKLNNLMVQLRKNCNHPDLLESVFDKSSAYPPVEQIVEQCGKFCLLDRL
        +KSDVE  LP KKE I+   M++ QK +   L+ K LE  ++  G     + +L N+ +QLRK CNHP L +   +    Y   E +VE  GK  LLD+L
Subjt:  MKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSEKGSGHAFKGKLNNLMVQLRKNCNHPDLLESVFDKSSAYPPVEQIVEQCGKFCLLDRL

Query:  LTWLFARKHKVLVFSQWTKILDLMEYYFSEKGFEVCRIDGGVKLDERKRQIQEFN-DGSSKYRIFIFKHAGW-----------------WS---------
        L  L  R  +VL+FSQ T++LD++E Y   +G++ CRIDG    ++R   I+ FN  GS K+   +   AG                  W+         
Subjt:  LTWLFARKHKVLVFSQWTKILDLMEYYFSEKGFEVCRIDGGVKLDERKRQIQEFN-DGSSKYRIFIFKHAGW-----------------WS---------

Query:  --------------GFATAQSIEGRILKRAFSKLKLEHVVIEKGQFHHERT--KAD------SGAAV-----EADISDDDLERILDR-SDLVVHLVQRMR
                       F T  +IE ++++RA+ KL L+ +VI++G+   ++T  K D       GA +     ++ I+D+D++RI+ +  +    L  +M+
Subjt:  --------------GFATAQSIEGRILKRAFSKLKLEHVVIEKGQFHHERT--KAD------SGAAV-----EADISDDDLERILDR-SDLVVHLVQRMR

Query:  K
        K
Subjt:  K

Q8RWY3 ISWI chromatin-remodeling complex ATPase CHR111.6e-2629.9Show/hide
Query:  MKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSEKGSGHAFKGKLNNLMVQLRKNCNHPDLLESVFDKSSAYPPVEQIVEQCGKFCLLDRL
        +KSDVE  LP KKE I+   M++ QK + + L+ K LE   +    G   + +L N+ +QLRK CNHP L +   +    Y   + ++   GK  LLD+L
Subjt:  MKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSEKGSGHAFKGKLNNLMVQLRKNCNHPDLLESVFDKSSAYPPVEQIVEQCGKFCLLDRL

Query:  LTWLFARKHKVLVFSQWTKILDLMEYYFSEKGFEVCRIDGGVKLDERKRQIQEFN-DGSSKYRIFIFKHAGW-----------------WS---------
        L  L  R  +VL+FSQ T++LD++E Y   +G+  CRIDG    DER   I+ +N  GS K+   +   AG                  W+         
Subjt:  LTWLFARKHKVLVFSQWTKILDLMEYYFSEKGFEVCRIDGGVKLDERKRQIQEFN-DGSSKYRIFIFKHAGW-----------------WS---------

Query:  --------------GFATAQSIEGRILKRAFSKLKLEHVVIEKGQFHHERT--------KADSGAAV-----EADISDDDLERILDR-SDLVVHLVQRMR
                       F T  +IE ++++RA+ KL L+ +VI++G+   ++T            GA +     ++ I+D+D++RI+ +  +    L  +M+
Subjt:  --------------GFATAQSIEGRILKRAFSKLKLEHVVIEKGQFHHERT--------KADSGAAV-----EADISDDDLERILDR-SDLVVHLVQRMR

Query:  K
        K
Subjt:  K

Q9XFH4 ATP-dependent DNA helicase DDM14.4e-7753.02Show/hide
Query:  MKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSEKG-SGHAFKGKLNNLMVQLRKNCNHPDLLESVFDKSSAYPPVEQIVEQCGKFCLLDR
        MK DVEL LPRKKEII+YA MT++QK FQEHL+N TLE HL E    G  +KGKLNNL++QLRKNCNHPDLL+   D S  YPPVE+IV QCGKF LL+R
Subjt:  MKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSEKG-SGHAFKGKLNNLMVQLRKNCNHPDLLESVFDKSSAYPPVEQIVEQCGKFCLLDR

Query:  LLTWLFARKHKVLVFSQWTKILDLMEYYFSEKGFEVCRIDGGVKLDERKRQIQEFNDGSSKYRIFIFKHAGWWSG-------------------------
        LL  LFA  HKVL+FSQWTK+LD+M+YYFSEKGFEVCRIDG VKLDER+RQI++F+D  S   IF+        G                         
Subjt:  LLTWLFARKHKVLVFSQWTKILDLMEYYFSEKGFEVCRIDGGVKLDERKRQIQEFNDGSSKYRIFIFKHAGWWSG-------------------------

Query:  ----------------FATAQSIEGRILKRAFSKLKLEHVVIEKGQFHHERTKADS------------------GAAVEADISDDDLERILDRSDLVV
                         +TAQSIE R+LKRA+SKLKLEHVVI +GQFH ER K+ +                     ++ DISD DL+R+LDRSDL +
Subjt:  ----------------FATAQSIEGRILKRAFSKLKLEHVVIEKGQFHHERTKADS------------------GAAVEADISDDDLERILDRSDLVV

Arabidopsis top hitse value%identityAlignment
AT3G06400.1 chromatin-remodeling protein 111.1e-2729.9Show/hide
Query:  MKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSEKGSGHAFKGKLNNLMVQLRKNCNHPDLLESVFDKSSAYPPVEQIVEQCGKFCLLDRL
        +KSDVE  LP KKE I+   M++ QK + + L+ K LE   +    G   + +L N+ +QLRK CNHP L +   +    Y   + ++   GK  LLD+L
Subjt:  MKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSEKGSGHAFKGKLNNLMVQLRKNCNHPDLLESVFDKSSAYPPVEQIVEQCGKFCLLDRL

Query:  LTWLFARKHKVLVFSQWTKILDLMEYYFSEKGFEVCRIDGGVKLDERKRQIQEFN-DGSSKYRIFIFKHAGW-----------------WS---------
        L  L  R  +VL+FSQ T++LD++E Y   +G+  CRIDG    DER   I+ +N  GS K+   +   AG                  W+         
Subjt:  LTWLFARKHKVLVFSQWTKILDLMEYYFSEKGFEVCRIDGGVKLDERKRQIQEFN-DGSSKYRIFIFKHAGW-----------------WS---------

Query:  --------------GFATAQSIEGRILKRAFSKLKLEHVVIEKGQFHHERT--------KADSGAAV-----EADISDDDLERILDR-SDLVVHLVQRMR
                       F T  +IE ++++RA+ KL L+ +VI++G+   ++T            GA +     ++ I+D+D++RI+ +  +    L  +M+
Subjt:  --------------GFATAQSIEGRILKRAFSKLKLEHVVIEKGQFHHERT--------KADSGAAV-----EADISDDDLERILDR-SDLVVHLVQRMR

Query:  K
        K
Subjt:  K

AT3G06400.3 chromatin-remodeling protein 111.1e-2729.9Show/hide
Query:  MKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSEKGSGHAFKGKLNNLMVQLRKNCNHPDLLESVFDKSSAYPPVEQIVEQCGKFCLLDRL
        +KSDVE  LP KKE I+   M++ QK + + L+ K LE   +    G   + +L N+ +QLRK CNHP L +   +    Y   + ++   GK  LLD+L
Subjt:  MKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSEKGSGHAFKGKLNNLMVQLRKNCNHPDLLESVFDKSSAYPPVEQIVEQCGKFCLLDRL

Query:  LTWLFARKHKVLVFSQWTKILDLMEYYFSEKGFEVCRIDGGVKLDERKRQIQEFN-DGSSKYRIFIFKHAGW-----------------WS---------
        L  L  R  +VL+FSQ T++LD++E Y   +G+  CRIDG    DER   I+ +N  GS K+   +   AG                  W+         
Subjt:  LTWLFARKHKVLVFSQWTKILDLMEYYFSEKGFEVCRIDGGVKLDERKRQIQEFN-DGSSKYRIFIFKHAGW-----------------WS---------

Query:  --------------GFATAQSIEGRILKRAFSKLKLEHVVIEKGQFHHERT--------KADSGAAV-----EADISDDDLERILDR-SDLVVHLVQRMR
                       F T  +IE ++++RA+ KL L+ +VI++G+   ++T            GA +     ++ I+D+D++RI+ +  +    L  +M+
Subjt:  --------------GFATAQSIEGRILKRAFSKLKLEHVVIEKGQFHHERT--------KADSGAAV-----EADISDDDLERILDR-SDLVVHLVQRMR

Query:  K
        K
Subjt:  K

AT5G18620.1 chromatin remodeling factor174.6e-2930.23Show/hide
Query:  MKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSEKGSGHAFKGKLNNLMVQLRKNCNHPDLLESVFDKSSAYPPVEQIVEQCGKFCLLDRL
        +KSDVE  LP KKE I+   M++ QK + + L+ K L     E  +G   + +L N+ +QLRK CNHP L +   +    Y   + +V   GK  LLD+L
Subjt:  MKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSEKGSGHAFKGKLNNLMVQLRKNCNHPDLLESVFDKSSAYPPVEQIVEQCGKFCLLDRL

Query:  LTWLFARKHKVLVFSQWTKILDLMEYYFSEKGFEVCRIDGGVKLDERKRQIQEFN-DGSSKYRIFIFKHAGW-----------------WS---------
        L  L  R  +VL+FSQ T++LD++E Y   +G++ CRIDG    DER   I+ +N  GS K+   +   AG                  W+         
Subjt:  LTWLFARKHKVLVFSQWTKILDLMEYYFSEKGFEVCRIDGGVKLDERKRQIQEFN-DGSSKYRIFIFKHAGW-----------------WS---------

Query:  --------------GFATAQSIEGRILKRAFSKLKLEHVVIEKGQFHHERT--------KADSGAAV-----EADISDDDLERILDR-SDLVVHLVQRMR
                       F T  +IE ++++RA+ KL L+ +VI++G+   ++T            GA +     ++ I+D+D++RI+ +  +    L  +M+
Subjt:  --------------GFATAQSIEGRILKRAFSKLKLEHVVIEKGQFHHERT--------KADSGAAV-----EADISDDDLERILDR-SDLVVHLVQRMR

Query:  K
        K
Subjt:  K

AT5G18620.2 chromatin remodeling factor174.6e-2930.23Show/hide
Query:  MKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSEKGSGHAFKGKLNNLMVQLRKNCNHPDLLESVFDKSSAYPPVEQIVEQCGKFCLLDRL
        +KSDVE  LP KKE I+   M++ QK + + L+ K L     E  +G   + +L N+ +QLRK CNHP L +   +    Y   + +V   GK  LLD+L
Subjt:  MKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSEKGSGHAFKGKLNNLMVQLRKNCNHPDLLESVFDKSSAYPPVEQIVEQCGKFCLLDRL

Query:  LTWLFARKHKVLVFSQWTKILDLMEYYFSEKGFEVCRIDGGVKLDERKRQIQEFN-DGSSKYRIFIFKHAGW-----------------WS---------
        L  L  R  +VL+FSQ T++LD++E Y   +G++ CRIDG    DER   I+ +N  GS K+   +   AG                  W+         
Subjt:  LTWLFARKHKVLVFSQWTKILDLMEYYFSEKGFEVCRIDGGVKLDERKRQIQEFN-DGSSKYRIFIFKHAGW-----------------WS---------

Query:  --------------GFATAQSIEGRILKRAFSKLKLEHVVIEKGQFHHERT--------KADSGAAV-----EADISDDDLERILDR-SDLVVHLVQRMR
                       F T  +IE ++++RA+ KL L+ +VI++G+   ++T            GA +     ++ I+D+D++RI+ +  +    L  +M+
Subjt:  --------------GFATAQSIEGRILKRAFSKLKLEHVVIEKGQFHHERT--------KADSGAAV-----EADISDDDLERILDR-SDLVVHLVQRMR

Query:  K
        K
Subjt:  K

AT5G66750.1 chromatin remodeling 13.1e-7853.02Show/hide
Query:  MKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSEKG-SGHAFKGKLNNLMVQLRKNCNHPDLLESVFDKSSAYPPVEQIVEQCGKFCLLDR
        MK DVEL LPRKKEII+YA MT++QK FQEHL+N TLE HL E    G  +KGKLNNL++QLRKNCNHPDLL+   D S  YPPVE+IV QCGKF LL+R
Subjt:  MKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSEKG-SGHAFKGKLNNLMVQLRKNCNHPDLLESVFDKSSAYPPVEQIVEQCGKFCLLDR

Query:  LLTWLFARKHKVLVFSQWTKILDLMEYYFSEKGFEVCRIDGGVKLDERKRQIQEFNDGSSKYRIFIFKHAGWWSG-------------------------
        LL  LFA  HKVL+FSQWTK+LD+M+YYFSEKGFEVCRIDG VKLDER+RQI++F+D  S   IF+        G                         
Subjt:  LLTWLFARKHKVLVFSQWTKILDLMEYYFSEKGFEVCRIDGGVKLDERKRQIQEFNDGSSKYRIFIFKHAGWWSG-------------------------

Query:  ----------------FATAQSIEGRILKRAFSKLKLEHVVIEKGQFHHERTKADS------------------GAAVEADISDDDLERILDRSDLVV
                         +TAQSIE R+LKRA+SKLKLEHVVI +GQFH ER K+ +                     ++ DISD DL+R+LDRSDL +
Subjt:  ----------------FATAQSIEGRILKRAFSKLKLEHVVIEKGQFHHERTKADS------------------GAAVEADISDDDLERILDRSDLVV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATCTGATGTTGAGCTAATGCTCCCCCGGAAAAAAGAAATCATAATTTATGCAAACATGACTGAGTATCAGAAGAACTTTCAGGAACATTTAATTAACAAGACATT
GGAAAATCATCTCTCAGAGAAGGGATCAGGACATGCTTTTAAAGGAAAGCTGAATAATTTGATGGTCCAGCTTCGGAAAAATTGCAACCATCCCGACCTCTTGGAATCAG
TTTTTGATAAATCTTCTGCATATCCTCCTGTAGAGCAGATAGTTGAGCAGTGTGGAAAATTTTGCTTACTAGATAGATTGTTGACATGGTTATTTGCACGCAAGCATAAA
GTCCTTGTATTCTCTCAATGGACTAAGATTTTGGATCTCATGGAGTACTATTTTAGTGAGAAGGGATTTGAAGTTTGCAGAATCGATGGTGGTGTTAAACTAGATGAAAG
AAAAAGACAGATCCAGGAGTTCAATGATGGTAGCAGCAAGTACAGGATATTTATTTTTAAGCACGCGGGCTGGTGGTCTGGATTTGCAACCGCTCAGTCTATAGAGGGCC
GCATTCTGAAAAGGGCCTTTAGTAAGTTGAAGCTTGAGCACGTGGTCATTGAGAAGGGGCAATTTCACCATGAACGGACAAAAGCCGACTCTGGAGCTGCTGTAGAGGCA
GACATAAGCGACGATGATTTGGAGCGCATTTTAGACCGCTCTGATCTGGTTGTCCATCTGGTTCAGAGGATGAGAAAGCTAAAGTTAATGGTTTGTGGGTGGGATCATGC
ATGTAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAATCTGATGTTGAGCTAATGCTCCCCCGGAAAAAAGAAATCATAATTTATGCAAACATGACTGAGTATCAGAAGAACTTTCAGGAACATTTAATTAACAAGACATT
GGAAAATCATCTCTCAGAGAAGGGATCAGGACATGCTTTTAAAGGAAAGCTGAATAATTTGATGGTCCAGCTTCGGAAAAATTGCAACCATCCCGACCTCTTGGAATCAG
TTTTTGATAAATCTTCTGCATATCCTCCTGTAGAGCAGATAGTTGAGCAGTGTGGAAAATTTTGCTTACTAGATAGATTGTTGACATGGTTATTTGCACGCAAGCATAAA
GTCCTTGTATTCTCTCAATGGACTAAGATTTTGGATCTCATGGAGTACTATTTTAGTGAGAAGGGATTTGAAGTTTGCAGAATCGATGGTGGTGTTAAACTAGATGAAAG
AAAAAGACAGATCCAGGAGTTCAATGATGGTAGCAGCAAGTACAGGATATTTATTTTTAAGCACGCGGGCTGGTGGTCTGGATTTGCAACCGCTCAGTCTATAGAGGGCC
GCATTCTGAAAAGGGCCTTTAGTAAGTTGAAGCTTGAGCACGTGGTCATTGAGAAGGGGCAATTTCACCATGAACGGACAAAAGCCGACTCTGGAGCTGCTGTAGAGGCA
GACATAAGCGACGATGATTTGGAGCGCATTTTAGACCGCTCTGATCTGGTTGTCCATCTGGTTCAGAGGATGAGAAAGCTAAAGTTAATGGTTTGTGGGTGGGATCATGC
ATGTAGTTGA
Protein sequenceShow/hide protein sequence
MKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSEKGSGHAFKGKLNNLMVQLRKNCNHPDLLESVFDKSSAYPPVEQIVEQCGKFCLLDRLLTWLFARKHK
VLVFSQWTKILDLMEYYFSEKGFEVCRIDGGVKLDERKRQIQEFNDGSSKYRIFIFKHAGWWSGFATAQSIEGRILKRAFSKLKLEHVVIEKGQFHHERTKADSGAAVEA
DISDDDLERILDRSDLVVHLVQRMRKLKLMVCGWDHACS