; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G008980 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G008980
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionclassical arabinogalactan protein 9-like
Genome locationCmo_Chr04:4522641..4523210
RNA-Seq ExpressionCmoCh04G008980
SyntenyCmoCh04G008980
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053440.1 classical arabinogalactan protein 9 [Cucumis melo var. makuwa]7.7e-3662.89Show/hide
Query:  MKMGIQFLMLLACLATSSMAQAPGAAPAQPPTTPAVPPPSTPPPAASPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPATPPPATPPSA-TPP
        MKMG QF+M LA  ATS MAQAPGAAPAQPP+TPAVPPPSTPPPAASPP                                 PPPATPPPATPP A TPP
Subjt:  MKMGIQFLMLLACLATSSMAQAPGAAPAQPPTTPAVPPPSTPPPAASPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPATPPPATPPSA-TPP

Query:  SSPPSQPPATPPTSP---APTSSPTAPPKEGPASSPSPSTASPPSPPTEGNVPSGAPGPN-APPPPEDNGAVSISRVAMVGSAVSGVLLAMVFA
        SSPPSQPPA+PPTSP   +P+S PTAPPKEGP    SP T+SPPSPP EGNVP+ +PGP+  PPPPE NGA S+SR  MVG AV+G  LAM+FA
Subjt:  SSPPSQPPATPPTSP---APTSSPTAPPKEGPASSPSPSTASPPSPPTEGNVPSGAPGPN-APPPPEDNGAVSISRVAMVGSAVSGVLLAMVFA

KAG6600667.1 hypothetical protein SDJN03_05900, partial [Cucurbita argyrosperma subsp. sororia]1.4e-5377.55Show/hide
Query:  MKMGIQFLMLLACLATSSMAQAPGAAPAQPPTTPAVPPPSTPPPAASPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPATPPPATPPSATPPS
        MKMGIQFLM+LACLATSSMAQAPGAAPAQPPTTPAVPPPSTPPPAASPP                                 PPPATPPPATPP ATPPS
Subjt:  MKMGIQFLMLLACLATSSMAQAPGAAPAQPPTTPAVPPPSTPPPAASPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPATPPPATPPSATPPS

Query:  -SPPSQPPATPPTSPAPTSSPTAPPKEGPAS------SPSPSTASPPSPPTEGNVPSGAPGPNAPPPPEDNGAVSISRVAMVGSAVSGVLLAMVFA
         +PPSQPPATPPTSPAPTSSPT PPKEGPAS      SPSPSTASPPSPPTEGNVPSGAPGPNAPPPPEDNGAVSISRVAMVGSAVSGVLLAMVFA
Subjt:  -SPPSQPPATPPTSPAPTSSPTAPPKEGPAS------SPSPSTASPPSPPTEGNVPSGAPGPNAPPPPEDNGAVSISRVAMVGSAVSGVLLAMVFA

XP_022941756.1 classical arabinogalactan protein 9-like [Cucurbita moschata]2.2e-5478.84Show/hide
Query:  MKMGIQFLMLLACLATSSMAQAPGAAPAQPPTTPAVPPPSTPPPAASPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPATPPPATPPSATPPS
        MKMGIQFLMLLACLATSSMAQAPGAAPAQPPTTPAVPPPSTPPPAAS                                        PPPATPPSATPPS
Subjt:  MKMGIQFLMLLACLATSSMAQAPGAAPAQPPTTPAVPPPSTPPPAASPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPATPPPATPPSATPPS

Query:  SPPSQPPATPPTSPAPTSSPTAPPKEGPASSPSPSTASPPSPPTEGNVPSGAPGPNAPPPPEDNGAVSISRVAMVGSAVSGVLLAMVFA
        SPPSQPPATPPTSPAPTSSPTAPPKEGPASSPSPSTASPPSPPTEGNVPSGAPGPNAPPPPEDNGAVSISRVAMVGSAVSGVLLAMVFA
Subjt:  SPPSQPPATPPTSPAPTSSPTAPPKEGPASSPSPSTASPPSPPTEGNVPSGAPGPNAPPPPEDNGAVSISRVAMVGSAVSGVLLAMVFA

XP_022984561.1 classical arabinogalactan protein 4-like [Cucurbita maxima]2.6e-3662.3Show/hide
Query:  MKMGIQFLMLLACLATSSMAQAPGAAPAQPPTTPAVPPPSTPPPAASPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPATPPPA-TPPSATPP
        MKMG QF+M+LA  ATSSMAQAPGAAPAQPPTTPAVPPPSTPPP  +P                                  PPPATPPPA TPP + PP
Subjt:  MKMGIQFLMLLACLATSSMAQAPGAAPAQPPTTPAVPPPSTPPPAASPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPATPPPA-TPPSATPP

Query:  SSPPSQPPATPPTSPAPTSSPTAPPKEGPASSPSPSTASPPSPPTEGNVPSGAPGPNAPPPPE-DNGAVSISRVAMVGSAVSGVLLAMVFA
        SSPP+QPPA+PPTSP P      PPKEGPASSP+PS+ASPPSPP+EG VPS +PGPN+PPPP  DNGA ++SR  MVG AV+G LLAMVFA
Subjt:  SSPPSQPPATPPTSPAPTSSPTAPPKEGPASSPSPSTASPPSPPTEGNVPSGAPGPNAPPPPE-DNGAVSISRVAMVGSAVSGVLLAMVFA

XP_023545089.1 classical arabinogalactan protein 4-like [Cucurbita pepo subsp. pepo]3.6e-5781.82Show/hide
Query:  MGIQFLMLLACLATSSMAQAPGAAPAQPPTTPAVPPPSTPPPAASPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPATPPPATPPSATPPSSP
        MGIQFLMLLACLATSSMAQAPGAAPAQPPTTPAVPPPSTPPPAASPP                                 PPPATPPPATPPSATPPSSP
Subjt:  MGIQFLMLLACLATSSMAQAPGAAPAQPPTTPAVPPPSTPPPAASPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPATPPPATPPSATPPSSP

Query:  PSQPPATPPTSPAPTSSPTAPPKEGPASSPSPSTASPPSPPTEGNVPSGAPGPNAPPPPEDNGAVSISRVAMVGSAVSGVLLAMVFA
        PSQPPATPPTSPAPTSSPT PPKEGPASSPSPSTASPPSPPTEGNVPSGAPGPNAPPPPEDNGAVSISRVAMVGSAVSGVLLAMVFA
Subjt:  PSQPPATPPTSPAPTSSPTAPPKEGPASSPSPSTASPPSPPTEGNVPSGAPGPNAPPPPEDNGAVSISRVAMVGSAVSGVLLAMVFA

TrEMBL top hitse value%identityAlignment
A0A0A0L0L1 Uncharacterized protein2.9e-3663.4Show/hide
Query:  MKMGIQFLMLLACLATSSMAQAPGAAPAQPPTTPAVPPPSTPPPAASPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPATPPPATPPSA-TPP
        MKMG QF+M LA  ATS MAQAPGAAPAQPP+TPAVPPPSTPPPAASPP                                 PPPATPPPATPP A TPP
Subjt:  MKMGIQFLMLLACLATSSMAQAPGAAPAQPPTTPAVPPPSTPPPAASPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPATPPPATPPSA-TPP

Query:  SSPPSQPPATPPTSP---APTSSPTAPPKEGPASSPSPSTASPPSPPTEGNVPSGAPGPN-APPPPEDNGAVSISRVAMVGSAVSGVLLAMVFA
        SSPPSQPPA+PPTSP   +P+S PTAPPKEGP    SP T+SPPSPP EGNVP+ +PGP+  PPPPE NGA S+SR  MVG AV+G  LAMVFA
Subjt:  SSPPSQPPATPPTSP---APTSSPTAPPKEGPASSPSPSTASPPSPPTEGNVPSGAPGPN-APPPPEDNGAVSISRVAMVGSAVSGVLLAMVFA

A0A5A7UE17 Classical arabinogalactan protein 93.7e-3662.89Show/hide
Query:  MKMGIQFLMLLACLATSSMAQAPGAAPAQPPTTPAVPPPSTPPPAASPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPATPPPATPPSA-TPP
        MKMG QF+M LA  ATS MAQAPGAAPAQPP+TPAVPPPSTPPPAASPP                                 PPPATPPPATPP A TPP
Subjt:  MKMGIQFLMLLACLATSSMAQAPGAAPAQPPTTPAVPPPSTPPPAASPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPATPPPATPPSA-TPP

Query:  SSPPSQPPATPPTSP---APTSSPTAPPKEGPASSPSPSTASPPSPPTEGNVPSGAPGPN-APPPPEDNGAVSISRVAMVGSAVSGVLLAMVFA
        SSPPSQPPA+PPTSP   +P+S PTAPPKEGP    SP T+SPPSPP EGNVP+ +PGP+  PPPPE NGA S+SR  MVG AV+G  LAM+FA
Subjt:  SSPPSQPPATPPTSP---APTSSPTAPPKEGPASSPSPSTASPPSPPTEGNVPSGAPGPN-APPPPEDNGAVSISRVAMVGSAVSGVLLAMVFA

A0A5D3CV77 Vegetative cell wall protein gp13.7e-3662.89Show/hide
Query:  MKMGIQFLMLLACLATSSMAQAPGAAPAQPPTTPAVPPPSTPPPAASPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPATPPPATPPSA-TPP
        MKMG QF+M LA  ATS MAQAPGAAPAQPP+TPAVPPPSTPPPAASPP                                 PPPATPPPATPP A TPP
Subjt:  MKMGIQFLMLLACLATSSMAQAPGAAPAQPPTTPAVPPPSTPPPAASPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPATPPPATPPSA-TPP

Query:  SSPPSQPPATPPTSP---APTSSPTAPPKEGPASSPSPSTASPPSPPTEGNVPSGAPGPN-APPPPEDNGAVSISRVAMVGSAVSGVLLAMVFA
        SSPPSQPPA+PPTSP   +P+S PTAPPKEGP    SP T+SPPSPP EGNVP+ +PGP+  PPPPE NGA S+SR  MVG AV+G  LAM+FA
Subjt:  SSPPSQPPATPPTSP---APTSSPTAPPKEGPASSPSPSTASPPSPPTEGNVPSGAPGPN-APPPPEDNGAVSISRVAMVGSAVSGVLLAMVFA

A0A6J1FLZ3 classical arabinogalactan protein 9-like1.0e-5478.84Show/hide
Query:  MKMGIQFLMLLACLATSSMAQAPGAAPAQPPTTPAVPPPSTPPPAASPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPATPPPATPPSATPPS
        MKMGIQFLMLLACLATSSMAQAPGAAPAQPPTTPAVPPPSTPPPAAS                                        PPPATPPSATPPS
Subjt:  MKMGIQFLMLLACLATSSMAQAPGAAPAQPPTTPAVPPPSTPPPAASPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPATPPPATPPSATPPS

Query:  SPPSQPPATPPTSPAPTSSPTAPPKEGPASSPSPSTASPPSPPTEGNVPSGAPGPNAPPPPEDNGAVSISRVAMVGSAVSGVLLAMVFA
        SPPSQPPATPPTSPAPTSSPTAPPKEGPASSPSPSTASPPSPPTEGNVPSGAPGPNAPPPPEDNGAVSISRVAMVGSAVSGVLLAMVFA
Subjt:  SPPSQPPATPPTSPAPTSSPTAPPKEGPASSPSPSTASPPSPPTEGNVPSGAPGPNAPPPPEDNGAVSISRVAMVGSAVSGVLLAMVFA

A0A6J1J5L5 classical arabinogalactan protein 4-like1.3e-3662.3Show/hide
Query:  MKMGIQFLMLLACLATSSMAQAPGAAPAQPPTTPAVPPPSTPPPAASPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPATPPPA-TPPSATPP
        MKMG QF+M+LA  ATSSMAQAPGAAPAQPPTTPAVPPPSTPPP  +P                                  PPPATPPPA TPP + PP
Subjt:  MKMGIQFLMLLACLATSSMAQAPGAAPAQPPTTPAVPPPSTPPPAASPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPATPPPA-TPPSATPP

Query:  SSPPSQPPATPPTSPAPTSSPTAPPKEGPASSPSPSTASPPSPPTEGNVPSGAPGPNAPPPPE-DNGAVSISRVAMVGSAVSGVLLAMVFA
        SSPP+QPPA+PPTSP P      PPKEGPASSP+PS+ASPPSPP+EG VPS +PGPN+PPPP  DNGA ++SR  MVG AV+G LLAMVFA
Subjt:  SSPPSQPPATPPTSPAPTSSPTAPPKEGPASSPSPSTASPPSPPTEGNVPSGAPGPNAPPPPE-DNGAVSISRVAMVGSAVSGVLLAMVFA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGATGGGTATTCAATTTCTGATGCTTTTGGCCTGCTTGGCTACTTCTTCTATGGCTCAGGCTCCTGGCGCTGCTCCCGCTCAGCCGCCCACCACCCCGGCTGTTCC
GCCCCCGTCTACTCCTCCTCCAGCTGCCTCCCCACCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNCCCCACCACCGGCCACCCCACCTCCCGCCACCCCTCCTTCAGCAACCCCACCATCATCCCCACCGAGCCAACCACCAGCCACACCT
CCTACATCTCCAGCACCGACCTCCTCTCCAACTGCGCCACCAAAGGAGGGTCCAGCCTCATCTCCATCTCCATCCACCGCGTCTCCACCATCACCACCAACGGAAGGAAA
CGTCCCCTCCGGCGCGCCTGGACCCAACGCTCCCCCACCCCCAGAAGATAATGGCGCAGTCTCCATTAGCCGGGTGGCGATGGTTGGCAGTGCTGTGAGCGGAGTTTTGT
TGGCAATGGTGTTCGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGATGGGTATTCAATTTCTGATGCTTTTGGCCTGCTTGGCTACTTCTTCTATGGCTCAGGCTCCTGGCGCTGCTCCCGCTCAGCCGCCCACCACCCCGGCTGTTCC
GCCCCCGTCTACTCCTCCTCCAGCTGCCTCCCCACCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNCCCCACCACCGGCCACCCCACCTCCCGCCACCCCTCCTTCAGCAACCCCACCATCATCCCCACCGAGCCAACCACCAGCCACACCT
CCTACATCTCCAGCACCGACCTCCTCTCCAACTGCGCCACCAAAGGAGGGTCCAGCCTCATCTCCATCTCCATCCACCGCGTCTCCACCATCACCACCAACGGAAGGAAA
CGTCCCCTCCGGCGCGCCTGGACCCAACGCTCCCCCACCCCCAGAAGATAATGGCGCAGTCTCCATTAGCCGGGTGGCGATGGTTGGCAGTGCTGTGAGCGGAGTTTTGT
TGGCAATGGTGTTCGCTTAG
Protein sequenceShow/hide protein sequence
MKMGIQFLMLLACLATSSMAQAPGAAPAQPPTTPAVPPPSTPPPAASPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPATPPPATPPSATPPSSPPSQPPATP
PTSPAPTSSPTAPPKEGPASSPSPSTASPPSPPTEGNVPSGAPGPNAPPPPEDNGAVSISRVAMVGSAVSGVLLAMVFA