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CmoCh04G009580 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G009580
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr04:4879799..4882711
RNA-Seq ExpressionCmoCh04G009580
SyntenyCmoCh04G009580
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650189.1 hypothetical protein Csa_011006, partial [Cucumis sativus]2.3e-3484.62Show/hide
Query:  MSANLSRRSSDFISFSALLSLLFVSALSDDSTPKDGIKSGNHPSSRSNTSSMIAIILLGLLVVV-LSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL
        MS N S R SDF+SFSA LSLLFVSALSDDS+ KD   SGNHPSSRS+T SM+AIILLG+LVVV LSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL
Subjt:  MSANLSRRSSDFISFSALLSLLFVSALSDDSTPKDGIKSGNHPSSRSNTSSMIAIILLGLLVVV-LSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL

Query:  GLRD
        GLRD
Subjt:  GLRD

KAG7015450.1 hypothetical protein SDJN02_23086, partial [Cucurbita argyrosperma subsp. argyrosperma]3.7e-3281.73Show/hide
Query:  MSANLSRRSSDFISFSALLSLLFVSALSDDSTPKDGIKSGNHPSSRSNTSSMIAIILLGLLVVV-LSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL
        MS NLSRRSSD ++ SA LSLLFVSALS+DS+ KD I SG H SS S T SM+AIILLG LVVV LSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL
Subjt:  MSANLSRRSSDFISFSALLSLLFVSALSDDSTPKDGIKSGNHPSSRSNTSSMIAIILLGLLVVV-LSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL

Query:  GLRD
        GLRD
Subjt:  GLRD

KAG7031355.1 hypothetical protein SDJN02_05395 [Cucurbita argyrosperma subsp. argyrosperma]7.9e-4398.06Show/hide
Query:  MSANLSRRSSDFISFSALLSLLFVSALSDDSTPKDGIKSGNHPSSRSNTSSMIAIILLGLLVVVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELG
        MS NLSRRSSDFISFSALLSLLFVSALSDDSTPKD IKSGNHPSSRSNTSSMIAIILLGLLVVVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELG
Subjt:  MSANLSRRSSDFISFSALLSLLFVSALSDDSTPKDGIKSGNHPSSRSNTSSMIAIILLGLLVVVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELG

Query:  LRD
        LRD
Subjt:  LRD

XP_016901207.1 PREDICTED: uncharacterized protein LOC103493315 [Cucumis melo]5.5e-3686.54Show/hide
Query:  MSANLSRRSSDFISFSALLSLLFVSALSDDSTPKDGIKSGNHPSSRSNTSSMIAIILLGLLV-VVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL
        MS NLS R SDF+SFSA LSLLFVSALSDDS+ KD I SGNHPSSRSNT SM+AIILLG+LV V+LSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL
Subjt:  MSANLSRRSSDFISFSALLSLLFVSALSDDSTPKDGIKSGNHPSSRSNTSSMIAIILLGLLV-VVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL

Query:  GLRD
        GLRD
Subjt:  GLRD

XP_022929545.1 uncharacterized protein LOC111436082 [Cucurbita moschata]3.7e-3281.73Show/hide
Query:  MSANLSRRSSDFISFSALLSLLFVSALSDDSTPKDGIKSGNHPSSRSNTSSMIAIILLGLLVVV-LSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL
        MS NLSRRSSD ++ SA LSLLFVSALS+DS+ KD I SG H SS S T SM+AIILLG LVVV LSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL
Subjt:  MSANLSRRSSDFISFSALLSLLFVSALSDDSTPKDGIKSGNHPSSRSNTSSMIAIILLGLLVVV-LSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL

Query:  GLRD
        GLRD
Subjt:  GLRD

TrEMBL top hitse value%identityAlignment
A0A0A0L5F0 Uncharacterized protein1.1e-3484.62Show/hide
Query:  MSANLSRRSSDFISFSALLSLLFVSALSDDSTPKDGIKSGNHPSSRSNTSSMIAIILLGLLVVV-LSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL
        MS N S R SDF+SFSA LSLLFVSALSDDS+ KD   SGNHPSSRS+T SM+AIILLG+LVVV LSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL
Subjt:  MSANLSRRSSDFISFSALLSLLFVSALSDDSTPKDGIKSGNHPSSRSNTSSMIAIILLGLLVVV-LSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL

Query:  GLRD
        GLRD
Subjt:  GLRD

A0A1S4DZ07 uncharacterized protein LOC1034933152.7e-3686.54Show/hide
Query:  MSANLSRRSSDFISFSALLSLLFVSALSDDSTPKDGIKSGNHPSSRSNTSSMIAIILLGLLV-VVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL
        MS NLS R SDF+SFSA LSLLFVSALSDDS+ KD I SGNHPSSRSNT SM+AIILLG+LV V+LSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL
Subjt:  MSANLSRRSSDFISFSALLSLLFVSALSDDSTPKDGIKSGNHPSSRSNTSSMIAIILLGLLV-VVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL

Query:  GLRD
        GLRD
Subjt:  GLRD

A0A5A7V4C4 Uncharacterized protein9.5e-2672Show/hide
Query:  LSRRSSDFISFSALLSLLFVSALSDDSTPKDGIKSGNHPSSRSNTSSMIAIILLGLLV-VVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
        +   + +F S S          LSDDS+ KD I SGNHPSSRSNT SM+AIILLG+LV V+LSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
Subjt:  LSRRSSDFISFSALLSLLFVSALSDDSTPKDGIKSGNHPSSRSNTSSMIAIILLGLLV-VVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD

A0A6J1EUP1 uncharacterized protein LOC1114360821.8e-3281.73Show/hide
Query:  MSANLSRRSSDFISFSALLSLLFVSALSDDSTPKDGIKSGNHPSSRSNTSSMIAIILLGLLVVV-LSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL
        MS NLSRRSSD ++ SA LSLLFVSALS+DS+ KD I SG H SS S T SM+AIILLG LVVV LSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL
Subjt:  MSANLSRRSSDFISFSALLSLLFVSALSDDSTPKDGIKSGNHPSSRSNTSSMIAIILLGLLVVV-LSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL

Query:  GLRD
        GLRD
Subjt:  GLRD

A0A6J1J6C2 uncharacterized protein LOC1114829871.8e-3281.73Show/hide
Query:  MSANLSRRSSDFISFSALLSLLFVSALSDDSTPKDGIKSGNHPSSRSNTSSMIAIILLGLLVVV-LSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL
        MS NLSRRSSD ++ SA LSLLFVSALS+DS+ KD I SG H SS S T SM+AIILLG LVVV LSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL
Subjt:  MSANLSRRSSDFISFSALLSLLFVSALSDDSTPKDGIKSGNHPSSRSNTSSMIAIILLGLLVVV-LSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL

Query:  GLRD
        GLRD
Subjt:  GLRD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G09645.1 unknown protein2.5e-1858.24Show/hide
Query:  FSALLSLLFVSALSDDS-TPKDGIKSGNHPSSRSNTSSMIAIILLGLLVVVL-SFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
        F A + L F   LS DS     G+K+ +H SS S T + + ++L+G + V + SFFL+KLWQKK+R+EQYARLLKLFEEDDELEVELGLRD
Subjt:  FSALLSLLFVSALSDDS-TPKDGIKSGNHPSSRSNTSSMIAIILLGLLVVVL-SFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD

AT1G57765.1 unknown protein2.7e-1760.98Show/hide
Query:  FVSALSDDSTPKDGIKSGNHPSSRSNTSSMIAIILLGL-LVVVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
        F+    D ++   G K+ +H SS S T + +  ILLG   V  LSFFL+KLWQKK+R+EQYARLLKLFEEDDELEVELGLRD
Subjt:  FVSALSDDSTPKDGIKSGNHPSSRSNTSSMIAIILLGL-LVVVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD

AT1G57765.2 unknown protein1.0e-1657.61Show/hide
Query:  FSALLSL--LFVSALSDDSTPKDGIKSGNHPSSRSNTSSMIAIILLGL-LVVVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
        F A+L L  ++     D ++   G K+ +H SS S T + +  ILLG   V  LSFFL+KLWQKK+R+EQYARLLKLFEEDDELEVELGLRD
Subjt:  FSALLSL--LFVSALSDDSTPKDGIKSGNHPSSRSNTSSMIAIILLGL-LVVVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD

AT3G53490.1 unknown protein1.7e-0640Show/hide
Query:  DDSTPKDGIKSGNHPSSRSNTSSMIAIILLGLLVVVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
        +  T K+  K G HP        +I ++LLG++ V L    +K W+KK+R+++ AR LKLFE+ D++E ELGL +
Subjt:  DDSTPKDGIKSGNHPSSRSNTSSMIAIILLGLLVVVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGCAAATTTGAGTCGCAGATCGTCTGATTTTATTTCGTTTTCGGCTTTGCTTTCTCTACTATTCGTCTCCGCCCTTTCTGATGACTCCACTCCCAAAGATGGTAT
TAAATCTGGAAATCATCCATCCTCCAGAAGCAACACTAGCTCGATGATTGCAATCATCCTCCTTGGTCTTTTGGTAGTGGTGTTGTCATTTTTCCTTTTCAAGTTATGGC
AAAAAAAGAGAAGAGAGGAGCAATATGCCCGACTTCTGAAATTGTTTGAAGAAGACGATGAGCTTGAAGTTGAGCTTGGTCTTCGGGATTGA
mRNA sequenceShow/hide mRNA sequence
AACATCAATAAAATTAAAATCAATTTTGAAAATATACTCGTAAAATTTGAAGGAATTTTAATCAACCATCTTGGTTCTTCACTCTTCAGGTAACTTCCAACCGTGTAGCG
TTTGCGTGGTTTTCCAGCTTTCAGCTTTCCCTTCAACTTCCATTTCTCTGCCGCGAGCGAGCGAGCGACAGAATTTGTTTTCGAGCTTGCCAGAAACAGATAGACACAGA
GATGAGCGCAAATTTGAGTCGCAGATCGTCTGATTTTATTTCGTTTTCGGCTTTGCTTTCTCTACTATTCGTCTCCGCCCTTTCTGATGACTCCACTCCCAAAGATGGTA
TTAAATCTGGAAATCATCCATCCTCCAGAAGCAACACTAGCTCGATGATTGCAATCATCCTCCTTGGTCTTTTGGTAGTGGTGTTGTCATTTTTCCTTTTCAAGTTATGG
CAAAAAAAGAGAAGAGAGGAGCAATATGCCCGACTTCTGAAATTGTTTGAAGAAGACGATGAGCTTGAAGTTGAGCTTGGTCTTCGGGATTGAAGGATATCTGAAATTTA
CTTCACTGAAGTTGGACTGTTCTTGCATCTCCATTCAATAGTGAGCTGTCATTTCTTTTTGGGGCCCTCACAAGTTAGGCAGTATATATCAAATGTTTTATCACACCTCA
AATGTTCAAAAGGGGCACTTCTCTTGCTTTTGTCTCTCTTTTGTAAAAAAAGCTACATATAATTTTCAGATTCCTGTACCTTATAATTGACAATATTCCTTCATCTGAAA
TTCTATCACAGGCTTAGAAAACATTATCTTGGAATTGTTGCATGTCAAATGTCTAAAGATCATAAGATGGTAGTTTGCTGTAAGGTTAGTTTTTGTTCTTCTTTTCTACA
ATTTTATGATGTATTAGTTTATCCAATTGAGGATAAAATGAGTGCTTATAGCATGTAAAATTGATCGAGTTCAGATATGTAAAATTGATGTTACATAACGAGTTTATTAA
TGAAAGGGTTAAGTTCTCAAATATTTTGTTCTTTCA
Protein sequenceShow/hide protein sequence
MSANLSRRSSDFISFSALLSLLFVSALSDDSTPKDGIKSGNHPSSRSNTSSMIAIILLGLLVVVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD