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CmoCh04G009630 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G009630
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionPathogenesis-related thaumatin superfamily protein
Genome locationCmo_Chr04:4902152..4902478
RNA-Seq ExpressionCmoCh04G009630
SyntenyCmoCh04G009630
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GER47269.1 pathogenesis-related thaumatin superfamily protein [Striga asiatica]1.6e-1852.29Show/hide
Query:  SLAPETTQYPGVSWGPLFISVVSTNFRSLGACTGTGGPPGYTAEFIFTSAGFG-------------------GDLAASPGEPSHSACFTTVAPKTEQKKS
        SLAP+TTQYPG S GP  ISV STN  S  AC G GGPPGYTAE  FTSAG G                    DL   PG+PSHS   T  AP T +K+ 
Subjt:  SLAPETTQYPGVSWGPLFISVVSTNFRSLGACTGTGGPPGYTAEFIFTSAGFG-------------------GDLAASPGEPSHSACFTTVAPKTEQKKS

Query:  RRNRTFLIP
        RR  TFL P
Subjt:  RRNRTFLIP
TQD88169.1 hypothetical protein C1H46_026230 [Malus baccata]4.9e-0442.39Show/hide
Query:  SLAPETTQYPGVSWGPLFISVVSTNFRSLGACTGTGGPPGYTA--EFIFTSAGFGGDLAASPGEPSHSACFTTVAPKTEQKKSRRNRTFLIP
        SLAP TTQYPGVS GPL +S+VSTN    GA  G     G+ A    +        D       PSHS      A  T +  S +N+TFLIP
Subjt:  SLAPETTQYPGVSWGPLFISVVSTNFRSLGACTGTGGPPGYTA--EFIFTSAGFGGDLAASPGEPSHSACFTTVAPKTEQKKSRRNRTFLIP
TrEMBL top hitse value%identityAlignment
A0A540LPB7 Uncharacterized protein2.4e-0442.39Show/hide
Query:  SLAPETTQYPGVSWGPLFISVVSTNFRSLGACTGTGGPPGYTA--EFIFTSAGFGGDLAASPGEPSHSACFTTVAPKTEQKKSRRNRTFLIP
        SLAP TTQYPGVS GPL +S+VSTN    GA  G     G+ A    +        D       PSHS      A  T +  S +N+TFLIP
Subjt:  SLAPETTQYPGVSWGPLFISVVSTNFRSLGACTGTGGPPGYTA--EFIFTSAGFGGDLAASPGEPSHSACFTTVAPKTEQKKSRRNRTFLIP
A0A5A7QQC0 Pathogenesis-related thaumatin superfamily protein7.6e-1952.29Show/hide
Query:  SLAPETTQYPGVSWGPLFISVVSTNFRSLGACTGTGGPPGYTAEFIFTSAGFG-------------------GDLAASPGEPSHSACFTTVAPKTEQKKS
        SLAP+TTQYPG S GP  ISV STN  S  AC G GGPPGYTAE  FTSAG G                    DL   PG+PSHS   T  AP T +K+ 
Subjt:  SLAPETTQYPGVSWGPLFISVVSTNFRSLGACTGTGGPPGYTAEFIFTSAGFG-------------------GDLAASPGEPSHSACFTTVAPKTEQKKS

Query:  RRNRTFLIP
        RR  TFL P
Subjt:  RRNRTFLIP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTCTTGCCCCAGAGACAACCCAATACCCAGGAGTTTCTTGGGGCCCTCTCTTCATTTCAGTGGTATCGACGAATTTCAGAAGCTTAGGGGCTTGTACAGGCACTGG
TGGACCCCCAGGATATACAGCAGAGTTTATATTCACATCAGCTGGTTTTGGAGGCGACTTGGCGGCCAGTCCAGGTGAACCTTCCCACTCTGCCTGCTTTACAACTGTAG
CTCCCAAAACTGAACAGAAGAAGAGTCGCAGAAACAGAACATTTCTCATCCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTCTTGCCCCAGAGACAACCCAATACCCAGGAGTTTCTTGGGGCCCTCTCTTCATTTCAGTGGTATCGACGAATTTCAGAAGCTTAGGGGCTTGTACAGGCACTGG
TGGACCCCCAGGATATACAGCAGAGTTTATATTCACATCAGCTGGTTTTGGAGGCGACTTGGCGGCCAGTCCAGGTGAACCTTCCCACTCTGCCTGCTTTACAACTGTAG
CTCCCAAAACTGAACAGAAGAAGAGTCGCAGAAACAGAACATTTCTCATCCCATGA
Protein sequenceShow/hide protein sequence
MSLAPETTQYPGVSWGPLFISVVSTNFRSLGACTGTGGPPGYTAEFIFTSAGFGGDLAASPGEPSHSACFTTVAPKTEQKKSRRNRTFLIP