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CmoCh04G009710 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G009710
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description3-deoxy-manno-octulosonate cytidylyltransferase
Genome locationCmo_Chr04:4940463..4941011
RNA-Seq ExpressionCmoCh04G009710
SyntenyCmoCh04G009710
Gene Ontology termsGO:0005829 - cytosol (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0008690 - 3-deoxy-manno-octulosonate cytidylyltransferase activity (molecular function)
InterPro domainsIPR003329 - Acylneuraminate cytidylyltransferase
IPR029044 - Nucleotide-diphospho-sugar transferases


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600729.1 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]2.2e-33100Show/hide
Query:  MSVCSSSSSSSSGGYLGSAKAWIVHGIVAGITIGAAIGARAYLGRSRKFRSRVVGIIPARFASSRFQGKPLVEILGKPMIQ
        MSVCSSSSSSSSGGYLGSAKAWIVHGIVAGITIGAAIGARAYLGRSRKFRSRVVGIIPARFASSRFQGKPLVEILGKPMIQ
Subjt:  MSVCSSSSSSSSGGYLGSAKAWIVHGIVAGITIGAAIGARAYLGRSRKFRSRVVGIIPARFASSRFQGKPLVEILGKPMIQ

KAG7031369.1 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-33100Show/hide
Query:  MSVCSSSSSSSSGGYLGSAKAWIVHGIVAGITIGAAIGARAYLGRSRKFRSRVVGIIPARFASSRFQGKPLVEILGKPMIQ
        MSVCSSSSSSSSGGYLGSAKAWIVHGIVAGITIGAAIGARAYLGRSRKFRSRVVGIIPARFASSRFQGKPLVEILGKPMIQ
Subjt:  MSVCSSSSSSSSGGYLGSAKAWIVHGIVAGITIGAAIGARAYLGRSRKFRSRVVGIIPARFASSRFQGKPLVEILGKPMIQ

XP_022941614.1 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial [Cucurbita moschata]2.2e-33100Show/hide
Query:  MSVCSSSSSSSSGGYLGSAKAWIVHGIVAGITIGAAIGARAYLGRSRKFRSRVVGIIPARFASSRFQGKPLVEILGKPMIQ
        MSVCSSSSSSSSGGYLGSAKAWIVHGIVAGITIGAAIGARAYLGRSRKFRSRVVGIIPARFASSRFQGKPLVEILGKPMIQ
Subjt:  MSVCSSSSSSSSGGYLGSAKAWIVHGIVAGITIGAAIGARAYLGRSRKFRSRVVGIIPARFASSRFQGKPLVEILGKPMIQ

XP_022977606.1 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial-like [Cucurbita maxima]1.4e-3298.77Show/hide
Query:  MSVCSSSSSSSSGGYLGSAKAWIVHGIVAGITIGAAIGARAYLGRSRKFRSRVVGIIPARFASSRFQGKPLVEILGKPMIQ
        MSVCSSSSSSSSGGYLGSAKAWIVHGIVAGITIGAAIGARAYLGRS KFRSRVVGIIPARFASSRFQGKPLVEILGKPMIQ
Subjt:  MSVCSSSSSSSSGGYLGSAKAWIVHGIVAGITIGAAIGARAYLGRSRKFRSRVVGIIPARFASSRFQGKPLVEILGKPMIQ

XP_023539187.1 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial [Cucurbita pepo subsp. pepo]2.2e-33100Show/hide
Query:  MSVCSSSSSSSSGGYLGSAKAWIVHGIVAGITIGAAIGARAYLGRSRKFRSRVVGIIPARFASSRFQGKPLVEILGKPMIQ
        MSVCSSSSSSSSGGYLGSAKAWIVHGIVAGITIGAAIGARAYLGRSRKFRSRVVGIIPARFASSRFQGKPLVEILGKPMIQ
Subjt:  MSVCSSSSSSSSGGYLGSAKAWIVHGIVAGITIGAAIGARAYLGRSRKFRSRVVGIIPARFASSRFQGKPLVEILGKPMIQ

TrEMBL top hitse value%identityAlignment
A0A0A0L2M7 Uncharacterized protein1.2e-2992.59Show/hide
Query:  MSVCSSSSSSSSGGYLGSAKAWIVHGIVAGITIGAAIGARAYLGRSRKFRSRVVGIIPARFASSRFQGKPLVEILGKPMIQ
        MSVCSSSSSSSS GYLGSAKAWIVHGIVAGI IGAA GAR+YLGRS+KFRSRVVGIIPARFASSRF+GKPLVEILGKPMIQ
Subjt:  MSVCSSSSSSSSGGYLGSAKAWIVHGIVAGITIGAAIGARAYLGRSRKFRSRVVGIIPARFASSRFQGKPLVEILGKPMIQ

A0A6J1CNP1 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial9.4e-3091.36Show/hide
Query:  MSVCSSSSSSSSGGYLGSAKAWIVHGIVAGITIGAAIGARAYLGRSRKFRSRVVGIIPARFASSRFQGKPLVEILGKPMIQ
        MSVCSSSSSSSS GYLG AKAWIVHG+VAGI IGAA+GARAYLGRS+KFRSRVVGIIPARFASSRF+GKPLVEILGKPMIQ
Subjt:  MSVCSSSSSSSSGGYLGSAKAWIVHGIVAGITIGAAIGARAYLGRSRKFRSRVVGIIPARFASSRFQGKPLVEILGKPMIQ

A0A6J1EN42 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial-like7.2e-3092.68Show/hide
Query:  MSVCSSSSSS-SSGGYLGSAKAWIVHGIVAGITIGAAIGARAYLGRSRKFRSRVVGIIPARFASSRFQGKPLVEILGKPMIQ
        MSVCSSSSSS SS GY GSAKAWIVHGIVAG+ IGAAIGARAYLGRS KFRSRVVGIIPARFASSRFQGKPLVEILGKPMIQ
Subjt:  MSVCSSSSSS-SSGGYLGSAKAWIVHGIVAGITIGAAIGARAYLGRSRKFRSRVVGIIPARFASSRFQGKPLVEILGKPMIQ

A0A6J1FNY1 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial1.1e-33100Show/hide
Query:  MSVCSSSSSSSSGGYLGSAKAWIVHGIVAGITIGAAIGARAYLGRSRKFRSRVVGIIPARFASSRFQGKPLVEILGKPMIQ
        MSVCSSSSSSSSGGYLGSAKAWIVHGIVAGITIGAAIGARAYLGRSRKFRSRVVGIIPARFASSRFQGKPLVEILGKPMIQ
Subjt:  MSVCSSSSSSSSGGYLGSAKAWIVHGIVAGITIGAAIGARAYLGRSRKFRSRVVGIIPARFASSRFQGKPLVEILGKPMIQ

A0A6J1IKE7 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial-like7.0e-3398.77Show/hide
Query:  MSVCSSSSSSSSGGYLGSAKAWIVHGIVAGITIGAAIGARAYLGRSRKFRSRVVGIIPARFASSRFQGKPLVEILGKPMIQ
        MSVCSSSSSSSSGGYLGSAKAWIVHGIVAGITIGAAIGARAYLGRS KFRSRVVGIIPARFASSRFQGKPLVEILGKPMIQ
Subjt:  MSVCSSSSSSSSGGYLGSAKAWIVHGIVAGITIGAAIGARAYLGRSRKFRSRVVGIIPARFASSRFQGKPLVEILGKPMIQ

SwissProt top hitse value%identityAlignment
A0LE62 3-deoxy-manno-octulosonate cytidylyltransferase1.4e-0680Show/hide
Query:  RVVGIIPARFASSRFQGKPLVEILGKPMIQ
        R+VGIIPAR+ SSRF GKPLV+ILGKPMI+
Subjt:  RVVGIIPARFASSRFQGKPLVEILGKPMIQ

B2RLM4 3-deoxy-manno-octulosonate cytidylyltransferase4.5e-0570.97Show/hide
Query:  SRVVGIIPARFASSRFQGKPLVEILGKPMIQ
        + V+ IIPARFASSRF GKPL ++LGK MIQ
Subjt:  SRVVGIIPARFASSRFQGKPLVEILGKPMIQ

Q7MTW6 3-deoxy-manno-octulosonate cytidylyltransferase4.5e-0570.97Show/hide
Query:  SRVVGIIPARFASSRFQGKPLVEILGKPMIQ
        + V+ IIPARFASSRF GKPL ++LGK MIQ
Subjt:  SRVVGIIPARFASSRFQGKPLVEILGKPMIQ

Q9C920 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial2.0e-2476.54Show/hide
Query:  MSVCSSSSSSSSGGYLGSAKAWIVHGIVAGITIGAAIGARAYLGRSRKFRSRVVGIIPARFASSRFQGKPLVEILGKPMIQ
        MSVCSSSSSS         K WIV+GI+AG  I AAIGARAYLGRS+KFRSRVVGIIPAR+ASSRF+GKPLV+ILGKPMIQ
Subjt:  MSVCSSSSSSSSGGYLGSAKAWIVHGIVAGITIGAAIGARAYLGRSRKFRSRVVGIIPARFASSRFQGKPLVEILGKPMIQ

Q9M4G3 3-deoxy-manno-octulosonate cytidylyltransferase3.1e-1452.27Show/hide
Query:  MSVCSSSSSSSSGGYLG-SAKAWIVHGIVAGITIGAAIGARAYLGRSRKFRSRVVGIIPARFASSRFQGKPLVEILGKPMIQASGDEL
        M +C+ SS SS+    G  A+ W++HG+  G    AA  A  Y  R   FRSR VGIIPARFAS+RF+GKPLV ILGKPMIQ + + +
Subjt:  MSVCSSSSSSSSGGYLG-SAKAWIVHGIVAGITIGAAIGARAYLGRSRKFRSRVVGIIPARFASSRFQGKPLVEILGKPMIQASGDEL

Arabidopsis top hitse value%identityAlignment
AT1G53000.1 Nucleotide-diphospho-sugar transferases superfamily protein1.4e-2576.54Show/hide
Query:  MSVCSSSSSSSSGGYLGSAKAWIVHGIVAGITIGAAIGARAYLGRSRKFRSRVVGIIPARFASSRFQGKPLVEILGKPMIQ
        MSVCSSSSSS         K WIV+GI+AG  I AAIGARAYLGRS+KFRSRVVGIIPAR+ASSRF+GKPLV+ILGKPMIQ
Subjt:  MSVCSSSSSSSSGGYLGSAKAWIVHGIVAGITIGAAIGARAYLGRSRKFRSRVVGIIPARFASSRFQGKPLVEILGKPMIQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGTTTGCTCTTCTTCTTCCTCTTCATCATCAGGCGGGTACCTCGGCAGTGCCAAAGCCTGGATCGTGCATGGGATTGTTGCCGGAATCACAATTGGCGCCGCCAT
CGGAGCTCGAGCTTATTTGGGTCGATCCAGAAAATTTCGGAGCCGCGTTGTCGGAATCATTCCCGCCCGATTCGCCTCTTCACGGTTCCAGGGGAAGCCTCTCGTTGAGA
TTCTCGGAAAGCCAATGATCCAGGCTTCTGGAGATGAATTAGAGAGGAATTGA
mRNA sequenceShow/hide mRNA sequence
GGTGGGAACCAACAGCCCAAGCAATCTTGGCATCAGTGCAATAACGAGCCACTCGTAGCGGGAGATCATGTCGGTTTGCTCTTCTTCTTCCTCTTCATCATCAGGCGGGT
ACCTCGGCAGTGCCAAAGCCTGGATCGTGCATGGGATTGTTGCCGGAATCACAATTGGCGCCGCCATCGGAGCTCGAGCTTATTTGGGTCGATCCAGAAAATTTCGGAGC
CGCGTTGTCGGAATCATTCCCGCCCGATTCGCCTCTTCACGGTTCCAGGGGAAGCCTCTCGTTGAGATTCTCGGAAAGCCAATGATCCAGGCTTCTGGAGATGAATTAGA
GAGGAATTGA
Protein sequenceShow/hide protein sequence
MSVCSSSSSSSSGGYLGSAKAWIVHGIVAGITIGAAIGARAYLGRSRKFRSRVVGIIPARFASSRFQGKPLVEILGKPMIQASGDELERN