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CmoCh04G009910 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G009910
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptioncalmodulin-like
Genome locationCmo_Chr04:4990791..4991288
RNA-Seq ExpressionCmoCh04G009910
SyntenyCmoCh04G009910
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064376.1 putative calcium-binding protein CML27 [Cucumis melo var. makuwa]6.4e-2871.11Show/hide
Query:  MPRKTKTYHPRPRISREQLRLIFRNHDDNGDGRLSSAELTQAFHYIGALLPSFRACHALLYTDSDRDGFIDEKDFEQLIDYAEKRQYTDI
        M R++KTYHPR R+SREQL LIFRNHD + DGRLS+ ELT+AF YIGA LP +RA HAL + DSDRDGFI EKDFE L++YAE+RQYT I
Subjt:  MPRKTKTYHPRPRISREQLRLIFRNHDDNGDGRLSSAELTQAFHYIGALLPSFRACHALLYTDSDRDGFIDEKDFEQLIDYAEKRQYTDI

KAG6591370.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia]8.1e-3170.83Show/hide
Query:  MPRKTKTYHPRPRISREQLRLIFRNHDDNGDGRLSSAELTQAFHYIGALLPSFRACHALLYTDSDRDGFIDEKDFEQLIDYAEKRQYTDIILTSKL
        M RK+KTY PRP++SREQL +IFRNHD +GDGRLS+ ELT AF YIGA LPS+RA HALL+TDSD DGFI EKDFE L++YAEKR+YTD + +S+L
Subjt:  MPRKTKTYHPRPRISREQLRLIFRNHDDNGDGRLSSAELTQAFHYIGALLPSFRACHALLYTDSDRDGFIDEKDFEQLIDYAEKRQYTDIILTSKL

KAG6600743.1 Calcium-binding protein CML38, partial [Cucurbita argyrosperma subsp. sororia]2.3e-3890Show/hide
Query:  MPRKTKTYHPRPRISREQLRLIFRNHDDNGDGRLSSAELTQAFHYIGALLPSFRACHALLYTDSDRDGFIDEKDFEQLIDYAEKRQYTDI
        MPRKTK YH RP+ISR+QLR+IFRNHD +GDGRLSSAELT+AFHYIGALLPSFRACHALLYTDSDRDGFIDEKDFEQLIDYAEKRQYT I
Subjt:  MPRKTKTYHPRPRISREQLRLIFRNHDDNGDGRLSSAELTQAFHYIGALLPSFRACHALLYTDSDRDGFIDEKDFEQLIDYAEKRQYTDI

KAG6600744.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia]5.4e-4398.89Show/hide
Query:  MPRKTKTYHPRPRISREQLRLIFRNHDDNGDGRLSSAELTQAFHYIGALLPSFRACHALLYTDSDRDGFIDEKDFEQLIDYAEKRQYTDI
        MPRKTKTYHPRPRISREQLRLIFRNHDDNGDGRLSSAELTQAFHYIGALLPSFRACHALLYTDSDRDGFIDEKDFEQLIDYAEKRQYT I
Subjt:  MPRKTKTYHPRPRISREQLRLIFRNHDDNGDGRLSSAELTQAFHYIGALLPSFRACHALLYTDSDRDGFIDEKDFEQLIDYAEKRQYTDI

KAG7024248.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. argyrosperma]4.4e-2973.33Show/hide
Query:  MPRKTKTYHPRPRISREQLRLIFRNHDDNGDGRLSSAELTQAFHYIGALLPSFRACHALLYTDSDRDGFIDEKDFEQLIDYAEKRQYTDI
        M RK+KTY PRP++SREQL +IFRNHD +GDGRLS+ ELT AF YIGA LPS+RA HALL+TDSD DGFI EKDFE L++YAEKR+YT I
Subjt:  MPRKTKTYHPRPRISREQLRLIFRNHDDNGDGRLSSAELTQAFHYIGALLPSFRACHALLYTDSDRDGFIDEKDFEQLIDYAEKRQYTDI

TrEMBL top hitse value%identityAlignment
A0A0A0KZR6 Uncharacterized protein9.0e-2870Show/hide
Query:  MPRKTKTYHPRPRISREQLRLIFRNHDDNGDGRLSSAELTQAFHYIGALLPSFRACHALLYTDSDRDGFIDEKDFEQLIDYAEKRQYTDI
        M RK+K Y+PR ++SREQL LIFRNHD + DGRLS+ ELT+AF YIGA LP++RA HALL+ DSDRDGFI EKDFE L++YAE+RQYT I
Subjt:  MPRKTKTYHPRPRISREQLRLIFRNHDDNGDGRLSSAELTQAFHYIGALLPSFRACHALLYTDSDRDGFIDEKDFEQLIDYAEKRQYTDI

A0A438DYH7 Uncharacterized protein1.1e-1247.56Show/hide
Query:  KTYHPRPRISREQLRLIFRNHDDNGDGRLSSAELTQAFHYIGALLPSFRACHALLYTDSDRDGFIDEKDFEQLIDYAEKRQY
        KT   +  +  +QL+ IF+ HD NGDG+L+ AEL QAF ++GAL+P +RA  AL + D+D DG I EK+ + L++YA K  Y
Subjt:  KTYHPRPRISREQLRLIFRNHDDNGDGRLSSAELTQAFHYIGALLPSFRACHALLYTDSDRDGFIDEKDFEQLIDYAEKRQY

A0A5A7UYC0 Putative calcium-binding protein CML104.1e-1244Show/hide
Query:  RISREQLRLIFRNHDDNGDGRLSSAELTQAFHYIGALLPSFRACHALLYTDSDRDGFIDEKDFEQLIDYAEKRQY
        ++SRE ++ IFR HD +GDGRLS +E+ +AF + G++LP ++A + + + D + DG+I+E++ ++L+DYAEK Q+
Subjt:  RISREQLRLIFRNHDDNGDGRLSSAELTQAFHYIGALLPSFRACHALLYTDSDRDGFIDEKDFEQLIDYAEKRQY

A0A5A7VDB9 Putative calcium-binding protein CML273.1e-2871.11Show/hide
Query:  MPRKTKTYHPRPRISREQLRLIFRNHDDNGDGRLSSAELTQAFHYIGALLPSFRACHALLYTDSDRDGFIDEKDFEQLIDYAEKRQYTDI
        M R++KTYHPR R+SREQL LIFRNHD + DGRLS+ ELT+AF YIGA LP +RA HAL + DSDRDGFI EKDFE L++YAE+RQYT I
Subjt:  MPRKTKTYHPRPRISREQLRLIFRNHDDNGDGRLSSAELTQAFHYIGALLPSFRACHALLYTDSDRDGFIDEKDFEQLIDYAEKRQYTDI

A5AWP8 Uncharacterized protein2.8e-1348.19Show/hide
Query:  KTYHPRPRISREQLRLIFRNHDDNGDGRLSSAELTQAFHYIGALLPSFRACHALLYTDSDRDGFIDEKDFEQLIDYAEKRQYT
        KT   +  +  +QL+ IF+ HD NGDG+L+ AEL QAF ++GAL+P +RA  AL + D+D DG I EK+ + L++YA K  YT
Subjt:  KTYHPRPRISREQLRLIFRNHDDNGDGRLSSAELTQAFHYIGALLPSFRACHALLYTDSDRDGFIDEKDFEQLIDYAEKRQYT

SwissProt top hitse value%identityAlignment
Q0DJV6 Probable calcium-binding protein CML184.6e-0539.66Show/hide
Query:  QLRLIFRNHDDNGDGRLSSAELTQAFHYIGALLPSFRACHALLYTDSDRDGFIDEKDF
        +L  +FR +D NGDG++S+ EL      +GA L        +   DSDRDGF+D  +F
Subjt:  QLRLIFRNHDDNGDGRLSSAELTQAFHYIGALLPSFRACHALLYTDSDRDGFIDEKDF

Q39419 Polcalcin Bet v 49.3e-0638.81Show/hide
Query:  HPRPRISREQLRLIFRNHDDNGDGRLSSAELTQAFHYIGALLPSFRACHALLYTDSDRDGFIDEKDF
        HP+ +  RE+   IF+  D NGDG++S+AEL +A   +G++ P     H +   D+D DGFI  ++F
Subjt:  HPRPRISREQLRLIFRNHDDNGDGRLSSAELTQAFHYIGALLPSFRACHALLYTDSDRDGFIDEKDF

Q6L4D4 Probable calcium-binding protein CML151.2e-0536.36Show/hide
Query:  PRPRISREQLRLIFRNHDDNGDGRLSSAELTQAFHYIGALLPSFRACHALLYTDSDRDGFIDEKDF
        PRP  + ++   +FR  D NGDGR+S AEL   F  +G  +        +   DSD DG+I   +F
Subjt:  PRPRISREQLRLIFRNHDDNGDGRLSSAELTQAFHYIGALLPSFRACHALLYTDSDRDGFIDEKDF

Q8L3R2 Probable calcium-binding protein CML413.0e-0435.38Show/hide
Query:  SREQLRLIFRNHDDNGDGRLSSAELTQAFHYIGALLPSFRACHALLYTDSDRDGFIDEKDFEQLI
        S+E+LR +F + D +GDG++S+ EL   F  +G  +    A  A+   D+D DG +  +DF  L+
Subjt:  SREQLRLIFRNHDDNGDGRLSSAELTQAFHYIGALLPSFRACHALLYTDSDRDGFIDEKDFEQLI

Q9SRE6 Calcium-binding protein CML381.8e-0434.78Show/hide
Query:  QLRLIFRNHDDNGDGRLSSAELTQAFHYIGALLPSFRACHALLYTDSDRDGFIDEKDFEQLIDYAEKRQ
        +L  +F   D N DGR+S  EL ++F  +G  L    A  A+  +D+D DG +D ++F QLI   ++ +
Subjt:  QLRLIFRNHDDNGDGRLSSAELTQAFHYIGALLPSFRACHALLYTDSDRDGFIDEKDFEQLIDYAEKRQ

Arabidopsis top hitse value%identityAlignment
AT1G18210.1 Calcium-binding EF-hand family protein1.1e-0435.48Show/hide
Query:  EQLRLIFRNHDDNGDGRLSSAELTQAFHYIGALLPSFRACHALLYTDSDRDGFIDEKDFEQL
        E+L+ +F   D NGDG++S  EL   F  +G           L   D+DRDG+I+  +F  L
Subjt:  EQLRLIFRNHDDNGDGRLSSAELTQAFHYIGALLPSFRACHALLYTDSDRDGFIDEKDFEQL

AT1G18210.2 Calcium-binding EF-hand family protein1.1e-0435.48Show/hide
Query:  EQLRLIFRNHDDNGDGRLSSAELTQAFHYIGALLPSFRACHALLYTDSDRDGFIDEKDFEQL
        E+L+ +F   D NGDG++S  EL   F  +G           L   D+DRDG+I+  +F  L
Subjt:  EQLRLIFRNHDDNGDGRLSSAELTQAFHYIGALLPSFRACHALLYTDSDRDGFIDEKDFEQL

AT1G76650.1 calmodulin-like 381.3e-0534.78Show/hide
Query:  QLRLIFRNHDDNGDGRLSSAELTQAFHYIGALLPSFRACHALLYTDSDRDGFIDEKDFEQLIDYAEKRQ
        +L  +F   D N DGR+S  EL ++F  +G  L    A  A+  +D+D DG +D ++F QLI   ++ +
Subjt:  QLRLIFRNHDDNGDGRLSSAELTQAFHYIGALLPSFRACHALLYTDSDRDGFIDEKDFEQLIDYAEKRQ

AT1G76650.3 calmodulin-like 381.3e-0534.78Show/hide
Query:  QLRLIFRNHDDNGDGRLSSAELTQAFHYIGALLPSFRACHALLYTDSDRDGFIDEKDFEQLIDYAEKRQ
        +L  +F   D N DGR+S  EL ++F  +G  L    A  A+  +D+D DG +D ++F QLI   ++ +
Subjt:  QLRLIFRNHDDNGDGRLSSAELTQAFHYIGALLPSFRACHALLYTDSDRDGFIDEKDFEQLIDYAEKRQ

AT3G50770.1 calmodulin-like 412.1e-0535.38Show/hide
Query:  SREQLRLIFRNHDDNGDGRLSSAELTQAFHYIGALLPSFRACHALLYTDSDRDGFIDEKDFEQLI
        S+E+LR +F + D +GDG++S+ EL   F  +G  +    A  A+   D+D DG +  +DF  L+
Subjt:  SREQLRLIFRNHDDNGDGRLSSAELTQAFHYIGALLPSFRACHALLYTDSDRDGFIDEKDFEQLI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCGCAAAACCAAAACGTACCACCCGAGGCCCAGGATATCAAGGGAGCAATTGAGGCTAATCTTCAGAAACCACGACGACAACGGCGACGGCCGCCTCAGCTCCGC
CGAGCTCACCCAAGCCTTCCACTATATCGGCGCCCTTTTGCCATCATTCAGAGCTTGCCACGCTCTTCTTTACACCGACTCTGACAGAGATGGATTCATCGATGAGAAGG
ATTTCGAACAGCTCATCGATTATGCAGAGAAACGCCAATACACCGACATTATTCTTACCAGTAAATTGCCACACTTTTGTACAAAGAAGCAAGAAGAGATGAGCTCTAGA
AAGGCCGAACCTAAGGGAGAAAACTTTCAATAG
mRNA sequenceShow/hide mRNA sequence
ATGCCTCGCAAAACCAAAACGTACCACCCGAGGCCCAGGATATCAAGGGAGCAATTGAGGCTAATCTTCAGAAACCACGACGACAACGGCGACGGCCGCCTCAGCTCCGC
CGAGCTCACCCAAGCCTTCCACTATATCGGCGCCCTTTTGCCATCATTCAGAGCTTGCCACGCTCTTCTTTACACCGACTCTGACAGAGATGGATTCATCGATGAGAAGG
ATTTCGAACAGCTCATCGATTATGCAGAGAAACGCCAATACACCGACATTATTCTTACCAGTAAATTGCCACACTTTTGTACAAAGAAGCAAGAAGAGATGAGCTCTAGA
AAGGCCGAACCTAAGGGAGAAAACTTTCAATAG
Protein sequenceShow/hide protein sequence
MPRKTKTYHPRPRISREQLRLIFRNHDDNGDGRLSSAELTQAFHYIGALLPSFRACHALLYTDSDRDGFIDEKDFEQLIDYAEKRQYTDIILTSKLPHFCTKKQEEMSSR
KAEPKGENFQ