; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G010030 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G010030
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionSpindle pole body component protein
Genome locationCmo_Chr04:5051110..5052273
RNA-Seq ExpressionCmoCh04G010030
SyntenyCmoCh04G010030
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600756.1 hypothetical protein SDJN03_05989, partial [Cucurbita argyrosperma subsp. sororia]2.4e-6697.14Show/hide
Query:  MKFLPEFVSCCVPVSVSRMENPEATEAPGAEEIRSLAPITTRIHRRRRRGALYTSAAKMAGDWTPSLGAISEDNVVLVVMERKKSEDRTAESERSVKRKS
        MKFLPEFVSCCVPVSVSRMEN EATEAPGAEEIRSLAPITTRI RRRRRGALYTSAAKMAGDWTPSLGAISEDNVVLVVMERKK+EDRTAESERSVKRKS
Subjt:  MKFLPEFVSCCVPVSVSRMENPEATEAPGAEEIRSLAPITTRIHRRRRRGALYTSAAKMAGDWTPSLGAISEDNVVLVVMERKKSEDRTAESERSVKRKS

Query:  GSQNGKARGVHGRNNSNDFRRSPAAIPVVIPAFSPTPFLF
        GS+NGKARGVHGRNNSNDFRRSPAAIPVVIPAFSPTPFLF
Subjt:  GSQNGKARGVHGRNNSNDFRRSPAAIPVVIPAFSPTPFLF

XP_022932132.1 uncharacterized protein LOC111438455 [Cucurbita moschata]4.6e-5480.71Show/hide
Query:  MKFLPEFVSCCVPVSVSRMENPEATEAPGAEEIRSLAPITTRIHRRRRRGALYTSAAKMAGDWTPSLGAISEDNVVLVVMERKKSEDRTAESERSVKRKS
        MKFL EFVSCCVPV++SR+ENPEAT APG EE++SLAPITTR HRRR+RGAL  SAAK+A DW PSLGAISED VVLV+ ER+KS+D+TAESERSVKRKS
Subjt:  MKFLPEFVSCCVPVSVSRMENPEATEAPGAEEIRSLAPITTRIHRRRRRGALYTSAAKMAGDWTPSLGAISEDNVVLVVMERKKSEDRTAESERSVKRKS

Query:  GSQNGKARGVHGRNNSNDFRRSPAAIPVVIPAFSPTPFLF
        GS++G+ARGV+GR+NSNDFRRSPA+IPVVIPAFSPTPFLF
Subjt:  GSQNGKARGVHGRNNSNDFRRSPAAIPVVIPAFSPTPFLF

XP_022942037.1 uncharacterized protein LOC111447225 [Cucurbita moschata]5.1e-69100Show/hide
Query:  MKFLPEFVSCCVPVSVSRMENPEATEAPGAEEIRSLAPITTRIHRRRRRGALYTSAAKMAGDWTPSLGAISEDNVVLVVMERKKSEDRTAESERSVKRKS
        MKFLPEFVSCCVPVSVSRMENPEATEAPGAEEIRSLAPITTRIHRRRRRGALYTSAAKMAGDWTPSLGAISEDNVVLVVMERKKSEDRTAESERSVKRKS
Subjt:  MKFLPEFVSCCVPVSVSRMENPEATEAPGAEEIRSLAPITTRIHRRRRRGALYTSAAKMAGDWTPSLGAISEDNVVLVVMERKKSEDRTAESERSVKRKS

Query:  GSQNGKARGVHGRNNSNDFRRSPAAIPVVIPAFSPTPFLF
        GSQNGKARGVHGRNNSNDFRRSPAAIPVVIPAFSPTPFLF
Subjt:  GSQNGKARGVHGRNNSNDFRRSPAAIPVVIPAFSPTPFLF

XP_022992846.1 uncharacterized protein LOC111489053 [Cucurbita maxima]8.2e-6797.14Show/hide
Query:  MKFLPEFVSCCVPVSVSRMENPEATEAPGAEEIRSLAPITTRIHRRRRRGALYTSAAKMAGDWTPSLGAISEDNVVLVVMERKKSEDRTAESERSVKRKS
        MKFLPEFVSCCVPVSVSRMENPEATEAPGAEEIRSLAP+TTRIH RRRRGA YTSAAKMAGDWTPSLGAISEDNVVLVVMERKKSEDRTAESERSVKRKS
Subjt:  MKFLPEFVSCCVPVSVSRMENPEATEAPGAEEIRSLAPITTRIHRRRRRGALYTSAAKMAGDWTPSLGAISEDNVVLVVMERKKSEDRTAESERSVKRKS

Query:  GSQNGKARGVHGRNNSNDFRRSPAAIPVVIPAFSPTPFLF
        GS+NGKARGVHGRNNSNDFRRSPAAIPVVIPAFSPTPFLF
Subjt:  GSQNGKARGVHGRNNSNDFRRSPAAIPVVIPAFSPTPFLF

XP_023526044.1 uncharacterized protein LOC111789638 [Cucurbita pepo subsp. pepo]1.3e-6798.57Show/hide
Query:  MKFLPEFVSCCVPVSVSRMENPEATEAPGAEEIRSLAPITTRIHRRRRRGALYTSAAKMAGDWTPSLGAISEDNVVLVVMERKKSEDRTAESERSVKRKS
        MKFLPEFVSCCVPVSVSRMENPEATEAPGAEEIRSLAPITTRI RRRRRGALYTSAAKMAGDWTPSLGAISEDNVVLVVMERKKSEDRTAESERSVKRKS
Subjt:  MKFLPEFVSCCVPVSVSRMENPEATEAPGAEEIRSLAPITTRIHRRRRRGALYTSAAKMAGDWTPSLGAISEDNVVLVVMERKKSEDRTAESERSVKRKS

Query:  GSQNGKARGVHGRNNSNDFRRSPAAIPVVIPAFSPTPFLF
        GS+NGKARGVHGRNNSNDFRRSPAAIPVVIPAFSPTPFLF
Subjt:  GSQNGKARGVHGRNNSNDFRRSPAAIPVVIPAFSPTPFLF

TrEMBL top hitse value%identityAlignment
A0A0A0L6G1 Uncharacterized protein2.0e-4774.13Show/hide
Query:  MKFLPEFVSCCVPVSVSRMENPEATEAPGAEEIRSLAPITTRIHRRRRRGALYTS-AAKMAGDWTPSLGAISEDNVVLVVMERKKSEDRTAESERSVKRK
        MKFL EFVSCCVPV++SR++NPE TEA G++E+RSL PITTR HRRR+R AL  S AAK+A DW PSLGAISED VVLVVMER+KS+++T E ERSVKRK
Subjt:  MKFLPEFVSCCVPVSVSRMENPEATEAPGAEEIRSLAPITTRIHRRRRRGALYTS-AAKMAGDWTPSLGAISEDNVVLVVMERKKSEDRTAESERSVKRK

Query:  SGSQNGKARGVHGRNNSNDF--RRSPAAIPVVIPAFSPTPFLF
        S S++G++RGVHGRNNSNDF  R+SP+AIPVVIPAFSP PFLF
Subjt:  SGSQNGKARGVHGRNNSNDF--RRSPAAIPVVIPAFSPTPFLF

A0A6J1EVT0 uncharacterized protein LOC1114384552.2e-5480.71Show/hide
Query:  MKFLPEFVSCCVPVSVSRMENPEATEAPGAEEIRSLAPITTRIHRRRRRGALYTSAAKMAGDWTPSLGAISEDNVVLVVMERKKSEDRTAESERSVKRKS
        MKFL EFVSCCVPV++SR+ENPEAT APG EE++SLAPITTR HRRR+RGAL  SAAK+A DW PSLGAISED VVLV+ ER+KS+D+TAESERSVKRKS
Subjt:  MKFLPEFVSCCVPVSVSRMENPEATEAPGAEEIRSLAPITTRIHRRRRRGALYTSAAKMAGDWTPSLGAISEDNVVLVVMERKKSEDRTAESERSVKRKS

Query:  GSQNGKARGVHGRNNSNDFRRSPAAIPVVIPAFSPTPFLF
        GS++G+ARGV+GR+NSNDFRRSPA+IPVVIPAFSPTPFLF
Subjt:  GSQNGKARGVHGRNNSNDFRRSPAAIPVVIPAFSPTPFLF

A0A6J1FP47 uncharacterized protein LOC1114472252.5e-69100Show/hide
Query:  MKFLPEFVSCCVPVSVSRMENPEATEAPGAEEIRSLAPITTRIHRRRRRGALYTSAAKMAGDWTPSLGAISEDNVVLVVMERKKSEDRTAESERSVKRKS
        MKFLPEFVSCCVPVSVSRMENPEATEAPGAEEIRSLAPITTRIHRRRRRGALYTSAAKMAGDWTPSLGAISEDNVVLVVMERKKSEDRTAESERSVKRKS
Subjt:  MKFLPEFVSCCVPVSVSRMENPEATEAPGAEEIRSLAPITTRIHRRRRRGALYTSAAKMAGDWTPSLGAISEDNVVLVVMERKKSEDRTAESERSVKRKS

Query:  GSQNGKARGVHGRNNSNDFRRSPAAIPVVIPAFSPTPFLF
        GSQNGKARGVHGRNNSNDFRRSPAAIPVVIPAFSPTPFLF
Subjt:  GSQNGKARGVHGRNNSNDFRRSPAAIPVVIPAFSPTPFLF

A0A6J1JD62 uncharacterized protein LOC1114833135.5e-5379.29Show/hide
Query:  MKFLPEFVSCCVPVSVSRMENPEATEAPGAEEIRSLAPITTRIHRRRRRGALYTSAAKMAGDWTPSLGAISEDNVVLVVMERKKSEDRTAESERSVKRKS
        MKFL EFVSCCVPV++SR+ENPEAT APG EE++SLAPI TR HRRR+RGAL  SAAK+A DW PSLGAISED VVLV+ ER+KS+D+TA SERSVKRKS
Subjt:  MKFLPEFVSCCVPVSVSRMENPEATEAPGAEEIRSLAPITTRIHRRRRRGALYTSAAKMAGDWTPSLGAISEDNVVLVVMERKKSEDRTAESERSVKRKS

Query:  GSQNGKARGVHGRNNSNDFRRSPAAIPVVIPAFSPTPFLF
        GS++G+ARGV+GR+NSNDFRRSPA+IPVVIPAFSPTPFLF
Subjt:  GSQNGKARGVHGRNNSNDFRRSPAAIPVVIPAFSPTPFLF

A0A6J1JUN0 uncharacterized protein LOC1114890534.0e-6797.14Show/hide
Query:  MKFLPEFVSCCVPVSVSRMENPEATEAPGAEEIRSLAPITTRIHRRRRRGALYTSAAKMAGDWTPSLGAISEDNVVLVVMERKKSEDRTAESERSVKRKS
        MKFLPEFVSCCVPVSVSRMENPEATEAPGAEEIRSLAP+TTRIH RRRRGA YTSAAKMAGDWTPSLGAISEDNVVLVVMERKKSEDRTAESERSVKRKS
Subjt:  MKFLPEFVSCCVPVSVSRMENPEATEAPGAEEIRSLAPITTRIHRRRRRGALYTSAAKMAGDWTPSLGAISEDNVVLVVMERKKSEDRTAESERSVKRKS

Query:  GSQNGKARGVHGRNNSNDFRRSPAAIPVVIPAFSPTPFLF
        GS+NGKARGVHGRNNSNDFRRSPAAIPVVIPAFSPTPFLF
Subjt:  GSQNGKARGVHGRNNSNDFRRSPAAIPVVIPAFSPTPFLF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G54585.1 unknown protein1.2e-0733.1Show/hide
Query:  MKFLPEFVSCCVPVSVSRMENPEATEAPGAEEIRSLAPITTRIHRRRRRGALYTSAAKMAGDWTPSLGAISEDNVVLVVMERKKSEDRTAESERSVKRKS
        MKFL E V  C        +  + + A  A++  S    T    RRRR+            +W PSL  ISE+   +  +  K       E ++ V+RKS
Subjt:  MKFLPEFVSCCVPVSVSRMENPEATEAPGAEEIRSLAPITTRIHRRRRRGALYTSAAKMAGDWTPSLGAISEDNVVLVVMERKKSEDRTAESERSVKRKS

Query:  -----GSQNGKARGVHGRNNSNDFRRSPAAIPVVIPAFSPTPFLF
             G  + ++ G H R  S+DF R+  A   VIPAFSPTPF+F
Subjt:  -----GSQNGKARGVHGRNNSNDFRRSPAAIPVVIPAFSPTPFLF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATTCCTTCCCGAGTTCGTTTCTTGCTGCGTGCCGGTTAGCGTGTCGCGCATGGAGAATCCGGAAGCGACGGAGGCTCCGGGAGCCGAGGAGATAAGATCTCTGGC
TCCGATCACCACCAGAATACACCGGCGTAGAAGACGAGGCGCGCTGTATACTTCGGCGGCTAAAATGGCCGGCGATTGGACGCCGTCGCTAGGAGCGATCTCGGAGGATA
ATGTAGTTCTGGTAGTGATGGAGAGAAAGAAGAGCGAGGATCGGACGGCGGAATCAGAGCGATCTGTGAAGAGGAAGAGCGGATCTCAAAATGGAAAGGCAAGAGGAGTT
CACGGACGTAACAACAGCAACGATTTTAGGCGAAGTCCGGCGGCCATACCGGTGGTGATTCCGGCGTTTTCTCCAACTCCGTTCTTATTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAATTCTGCTTTCAACCATGGGAATGAAGGGTGTTTTGGTAATTAAGTATAAACAAGTACAAATGTAAACACCAGAAAATCAATACCCTACTGTTTCTATAAATTGA
TAACCAAGTCCGCTCAACCGCTGCCACGGGTTGCCGTAATTCTACGACGGACGACGGAGTAGAATATGGACTGCCGCCGTATTAGTCAATGGTAGTGATTATAAGAGATT
TGCTCTTTAAGCTCGCCTCTTTCTTGGCATCGGATCGGAGCTGCTGTTCTCGTTCTGATCACTCTCCTTCTGCCTAGAGACTCGACAGGAGTGGTTTAGTGTCCGATGAA
ATTCCTTCCCGAGTTCGTTTCTTGCTGCGTGCCGGTTAGCGTGTCGCGCATGGAGAATCCGGAAGCGACGGAGGCTCCGGGAGCCGAGGAGATAAGATCTCTGGCTCCGA
TCACCACCAGAATACACCGGCGTAGAAGACGAGGCGCGCTGTATACTTCGGCGGCTAAAATGGCCGGCGATTGGACGCCGTCGCTAGGAGCGATCTCGGAGGATAATGTA
GTTCTGGTAGTGATGGAGAGAAAGAAGAGCGAGGATCGGACGGCGGAATCAGAGCGATCTGTGAAGAGGAAGAGCGGATCTCAAAATGGAAAGGCAAGAGGAGTTCACGG
ACGTAACAACAGCAACGATTTTAGGCGAAGTCCGGCGGCCATACCGGTGGTGATTCCGGCGTTTTCTCCAACTCCGTTCTTATTCTGATGCAATTCTGCTTCGATTATCC
GATCACTCAGGCTTGTGTAATATTAGTGCATTTTTGCATAACTCAATTGCATCATAATAATGAATTTGTATAATCAATAAAAAAATTGAATAGAGAAAGGTGAGGTTGAG
GAGGAAACTTATCCCTGGAATTGTAGCTTGTTGGTTCAACTGCTCTCTGCAATTTTAAATCTTCCCATTTCTACATGATCGATGCTTTGTTCTCTTTTGTTCTTAGATTC
AACTTAGGGCAAAAATAACCTGTTTATTTATTTATTTATTGAGTGAATATTCCT
Protein sequenceShow/hide protein sequence
MKFLPEFVSCCVPVSVSRMENPEATEAPGAEEIRSLAPITTRIHRRRRRGALYTSAAKMAGDWTPSLGAISEDNVVLVVMERKKSEDRTAESERSVKRKSGSQNGKARGV
HGRNNSNDFRRSPAAIPVVIPAFSPTPFLF