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CmoCh04G010050 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G010050
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionYL1_C domain-containing protein
Genome locationCmo_Chr04:5067527..5067733
RNA-Seq ExpressionCmoCh04G010050
SyntenyCmoCh04G010050
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0019787 - ubiquitin-like protein transferase activity (molecular function)
InterPro domainsIPR009069 - Cysteine alpha-hairpin motif superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8077725.1 hypothetical protein FH972_016259 [Carpinus fangiana]8.1e-1267.92Show/hide
Query:  KSRAALMNLSPCDVEALRKCLQENNGDRIKCESQIQAFKLSCSLKKPNPSLQS
        +S +A   +SPCDVEAL+KCL+ENNGD +KC+SQI+AFK SCSLKKPN S +S
Subjt:  KSRAALMNLSPCDVEALRKCLQENNGDRIKCESQIQAFKLSCSLKKPNPSLQS

KAE8077726.1 hypothetical protein FH972_016259 [Carpinus fangiana]8.1e-1267.92Show/hide
Query:  KSRAALMNLSPCDVEALRKCLQENNGDRIKCESQIQAFKLSCSLKKPNPSLQS
        +S +A   +SPCDVEAL+KCL+ENNGD +KC+SQI+AFK SCSLKKPN S +S
Subjt:  KSRAALMNLSPCDVEALRKCLQENNGDRIKCESQIQAFKLSCSLKKPNPSLQS

KAE8650146.1 hypothetical protein Csa_010997, partial [Cucumis sativus]3.1e-1975.76Show/hide
Query:  MDGKTQKSRAALMNLSPCDVEALRKCLQENNGDRIKCESQIQAFKLSCSLKKPNPSLQSVRDGLET
        MDG T+KSRA   N SPCDVEAL+KCLQENNGDR+KCESQIQAF  SCSLKK NPSLQS R+  +T
Subjt:  MDGKTQKSRAALMNLSPCDVEALRKCLQENNGDRIKCESQIQAFKLSCSLKKPNPSLQSVRDGLET

KAF3954648.1 hypothetical protein CMV_020027 [Castanea mollissima]6.2e-1257.97Show/hide
Query:  MDGKTQKSRAALMNLSPCDVEALRKCLQENNGDRIKCESQIQAFKLSCSLKKPNPSLQS---VRDGLET
        MD K + S      +SPCDVEAL+KCL+EN GD +KC+SQI+AFK SCS+KKPNPS +S   +  GL T
Subjt:  MDGKTQKSRAALMNLSPCDVEALRKCLQENNGDRIKCESQIQAFKLSCSLKKPNPSLQS---VRDGLET

OAY48318.1 hypothetical protein MANES_06G149600v8 [Manihot esculenta]6.2e-1264.91Show/hide
Query:  GKTQKSRAALMNLSPCDVEALRKCLQENNGDRIKCESQIQAFKLSCSLKKPNPSLQS
        G+  +S  A   +SPCDVEAL+KCL+EN GD +KC+SQI+AFK SCSLKKP+ SLQS
Subjt:  GKTQKSRAALMNLSPCDVEALRKCLQENNGDRIKCESQIQAFKLSCSLKKPNPSLQS

TrEMBL top hitse value%identityAlignment
A0A0A0L2G8 Uncharacterized protein7.9e-2176.47Show/hide
Query:  MDGKTQKSRAALMNLSPCDVEALRKCLQENNGDRIKCESQIQAFKLSCSLKKPNPSLQSVRDGLETGV
        MDG T+KSRA   N SPCDVEAL+KCLQENNGDR+KCESQIQAF  SCSLKK NPSLQS R+  +TGV
Subjt:  MDGKTQKSRAALMNLSPCDVEALRKCLQENNGDRIKCESQIQAFKLSCSLKKPNPSLQSVRDGLETGV

A0A2C9VSE9 Uncharacterized protein3.0e-1264.91Show/hide
Query:  GKTQKSRAALMNLSPCDVEALRKCLQENNGDRIKCESQIQAFKLSCSLKKPNPSLQS
        G+  +S  A   +SPCDVEAL+KCL+EN GD +KC+SQI+AFK SCSLKKP+ SLQS
Subjt:  GKTQKSRAALMNLSPCDVEALRKCLQENNGDRIKCESQIQAFKLSCSLKKPNPSLQS

A0A5N6RFC3 Uncharacterized protein3.9e-1267.92Show/hide
Query:  KSRAALMNLSPCDVEALRKCLQENNGDRIKCESQIQAFKLSCSLKKPNPSLQS
        +S +A   +SPCDVEAL+KCL+ENNGD +KC+SQI+AFK SCSLKKPN S +S
Subjt:  KSRAALMNLSPCDVEALRKCLQENNGDRIKCESQIQAFKLSCSLKKPNPSLQS

A0A5N6RHF1 Uncharacterized protein3.9e-1267.92Show/hide
Query:  KSRAALMNLSPCDVEALRKCLQENNGDRIKCESQIQAFKLSCSLKKPNPSLQS
        +S +A   +SPCDVEAL+KCL+ENNGD +KC+SQI+AFK SCSLKKPN S +S
Subjt:  KSRAALMNLSPCDVEALRKCLQENNGDRIKCESQIQAFKLSCSLKKPNPSLQS

B9RIW7 Uncharacterized protein3.9e-1264.41Show/hide
Query:  MDGKTQKSRAALMNLSPCDVEALRKCLQENNGDRIKCESQIQAFKLSCSLKKPNPSLQS
        MD K + S A  + LSPCDVEAL+KCL+EN GD +KC+SQI+AFK SCSLKKP PS+ +
Subjt:  MDGKTQKSRAALMNLSPCDVEALRKCLQENNGDRIKCESQIQAFKLSCSLKKPNPSLQS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGGCAAAACGCAAAAATCTAGGGCTGCGTTGATGAATCTATCGCCCTGCGATGTTGAAGCTCTCAGGAAATGTTTGCAGGAAAACAATGGGGATCGCATTAAGTG
CGAGTCTCAAATACAAGCCTTCAAGTTGTCTTGCTCCCTGAAGAAACCAAATCCATCCTTGCAATCGGTAAGAGACGGCCTCGAGACTGGTGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACGGCAAAACGCAAAAATCTAGGGCTGCGTTGATGAATCTATCGCCCTGCGATGTTGAAGCTCTCAGGAAATGTTTGCAGGAAAACAATGGGGATCGCATTAAGTG
CGAGTCTCAAATACAAGCCTTCAAGTTGTCTTGCTCCCTGAAGAAACCAAATCCATCCTTGCAATCGGTAAGAGACGGCCTCGAGACTGGTGTTTGA
Protein sequenceShow/hide protein sequence
MDGKTQKSRAALMNLSPCDVEALRKCLQENNGDRIKCESQIQAFKLSCSLKKPNPSLQSVRDGLETGV