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CmoCh04G010130 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G010130
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr04:5088491..5089098
RNA-Seq ExpressionCmoCh04G010130
SyntenyCmoCh04G010130
Gene Ontology termsGO:0010089 - xylem development (biological process)
InterPro domainsIPR039280 - VASCULAR-RELATED UNKNOWN PROTEIN


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600765.1 hypothetical protein SDJN03_05998, partial [Cucurbita argyrosperma subsp. sororia]1.6e-7096.6Show/hide
Query:  MENSAISRICTQKQVDQDHSSWTSSMDDLLLFDHSKTISYHFQNAAVFSSSDDDDLQDTATSPPHPSIISDMDGLSSKQKK--QLQQQQLSAMINQTKHK
        MENSAISRICTQKQVD+DHSSWTSSMDDLLLFDHSKTISYH QNAAVFSSSDDDDLQDTATSPPHPSIISDMDGLSSKQKK  Q QQQQLSAMINQTKHK
Subjt:  MENSAISRICTQKQVDQDHSSWTSSMDDLLLFDHSKTISYHFQNAAVFSSSDDDDLQDTATSPPHPSIISDMDGLSSKQKK--QLQQQQLSAMINQTKHK

Query:  GKEIEEFGEVEDRIEVGFVGRDNNCSTGLKNIGLCLVPVSMAINYFG
        GKEIEEFGEVEDRIEVGFVGRDNNCSTGLKNIGLCLVPVSMAINYFG
Subjt:  GKEIEEFGEVEDRIEVGFVGRDNNCSTGLKNIGLCLVPVSMAINYFG

KAG7031402.1 hypothetical protein SDJN02_05442, partial [Cucurbita argyrosperma subsp. argyrosperma]5.1e-7297.93Show/hide
Query:  MENSAISRICTQKQVDQDHSSWTSSMDDLLLFDHSKTISYHFQNAAVFSSSDDDDLQDTATSPPHPSIISDMDGLSSKQKKQLQQQQLSAMINQTKHKGK
        MENSAISRICTQKQVD+DHSSWTSSMDDLLLFDHSKTISYH QNAAVFSSSDDDDLQDTATSPPHPSIISDMDGLSSKQKKQ QQQQLSAMINQTKHKGK
Subjt:  MENSAISRICTQKQVDQDHSSWTSSMDDLLLFDHSKTISYHFQNAAVFSSSDDDDLQDTATSPPHPSIISDMDGLSSKQKKQLQQQQLSAMINQTKHKGK

Query:  EIEEFGEVEDRIEVGFVGRDNNCSTGLKNIGLCLVPVSMAINYFG
        EIEEFGEVEDRIEVGFVGRDNNCSTGLKNIGLCLVPVSMAINYFG
Subjt:  EIEEFGEVEDRIEVGFVGRDNNCSTGLKNIGLCLVPVSMAINYFG

XP_011652737.2 uncharacterized protein LOC105435073 [Cucumis sativus]1.8e-3255Show/hide
Query:  MENSAISRICTQKQVD------QDHSSW--TSSMDDLLLFDHSKTI---SYH-FQNAAVFSS--------------------SDDDDLQDTATSPPHPSI
        MENSA SRIC+ ++ D       +  SW  +SSMDDLL+FD   T    SY  FQ +   SS                    + DDDL+DTATSPPHPSI
Subjt:  MENSAISRICTQKQVD------QDHSSW--TSSMDDLLLFDHSKTI---SYH-FQNAAVFSS--------------------SDDDDLQDTATSPPHPSI

Query:  ISDMDGLSSKQKKQLQQQQLSAMINQTKHKGKEIEEFGEVEDRI-EVGFVGRDNN---CSTGLKNIGLCLVPVSMAINYF
        +S MD  SSKQ+K+ +     AM+NQTKHKG   E++GEVEDRI EVGFVGRDNN   CSTGLKNIGLCLVPVSMA+NYF
Subjt:  ISDMDGLSSKQKKQLQQQQLSAMINQTKHKGKEIEEFGEVEDRI-EVGFVGRDNN---CSTGLKNIGLCLVPVSMAINYF

XP_022941575.1 uncharacterized protein LOC111446888 [Cucurbita moschata]9.3e-74100Show/hide
Query:  MENSAISRICTQKQVDQDHSSWTSSMDDLLLFDHSKTISYHFQNAAVFSSSDDDDLQDTATSPPHPSIISDMDGLSSKQKKQLQQQQLSAMINQTKHKGK
        MENSAISRICTQKQVDQDHSSWTSSMDDLLLFDHSKTISYHFQNAAVFSSSDDDDLQDTATSPPHPSIISDMDGLSSKQKKQLQQQQLSAMINQTKHKGK
Subjt:  MENSAISRICTQKQVDQDHSSWTSSMDDLLLFDHSKTISYHFQNAAVFSSSDDDDLQDTATSPPHPSIISDMDGLSSKQKKQLQQQQLSAMINQTKHKGK

Query:  EIEEFGEVEDRIEVGFVGRDNNCSTGLKNIGLCLVPVSMAINYFG
        EIEEFGEVEDRIEVGFVGRDNNCSTGLKNIGLCLVPVSMAINYFG
Subjt:  EIEEFGEVEDRIEVGFVGRDNNCSTGLKNIGLCLVPVSMAINYFG

XP_022989755.1 uncharacterized protein LOC111486825 [Cucurbita maxima]2.2e-6794.52Show/hide
Query:  MENSAISRICTQKQVDQDHSSWTSSMDDLLLFDHSKTISYHFQNAAVFSSS-DDDDLQDTATSPPHPSIISDMDGLSSKQKKQLQQQQLSAMINQTKHKG
        MENSAIS+ICTQKQVDQDHSSWTSSMDDLLLFD+SKT SYHFQNAAVFSSS DDDDLQDTATSPPHPSIISDMDGLSSKQKKQ QQQQ +AMINQTKH+G
Subjt:  MENSAISRICTQKQVDQDHSSWTSSMDDLLLFDHSKTISYHFQNAAVFSSS-DDDDLQDTATSPPHPSIISDMDGLSSKQKKQLQQQQLSAMINQTKHKG

Query:  KEIEEFGEVEDRIEVGFVGRDNNCSTGLKNIGLCLVPVSMAINYFG
        KEIEEFGEVEDRIEVGFVGRDNNCSTGLKNIGLCLVPVSMAINYFG
Subjt:  KEIEEFGEVEDRIEVGFVGRDNNCSTGLKNIGLCLVPVSMAINYFG

TrEMBL top hitse value%identityAlignment
A0A0A0L2F7 Uncharacterized protein8.6e-3355Show/hide
Query:  MENSAISRICTQKQVD------QDHSSW--TSSMDDLLLFDHSKTI---SYH-FQNAAVFSS--------------------SDDDDLQDTATSPPHPSI
        MENSA SRIC+ ++ D       +  SW  +SSMDDLL+FD   T    SY  FQ +   SS                    + DDDL+DTATSPPHPSI
Subjt:  MENSAISRICTQKQVD------QDHSSW--TSSMDDLLLFDHSKTI---SYH-FQNAAVFSS--------------------SDDDDLQDTATSPPHPSI

Query:  ISDMDGLSSKQKKQLQQQQLSAMINQTKHKGKEIEEFGEVEDRI-EVGFVGRDNN---CSTGLKNIGLCLVPVSMAINYF
        +S MD  SSKQ+K+ +     AM+NQTKHKG   E++GEVEDRI EVGFVGRDNN   CSTGLKNIGLCLVPVSMA+NYF
Subjt:  ISDMDGLSSKQKKQLQQQQLSAMINQTKHKGKEIEEFGEVEDRI-EVGFVGRDNN---CSTGLKNIGLCLVPVSMAINYF

A0A1S3CKU1 uncharacterized protein LOC1035016014.3e-3254.44Show/hide
Query:  MENSAISRICTQKQVDQ------DHSSW--TSSMDDLLLFDHSKTI---SYHFQNAAVFSSS---------------------DDDDLQDTATSPPHPSI
        MENSA SRIC+  + D+      +  SW  +SSMDDLL+FD   TI   SY F    +  SS                      DDDL+DTATSPPHPSI
Subjt:  MENSAISRICTQKQVDQ------DHSSW--TSSMDDLLLFDHSKTI---SYHFQNAAVFSSS---------------------DDDDLQDTATSPPHPSI

Query:  ISDMDGLSSKQKKQLQQQQLSAMINQTKHKGKEIEEFGEVEDR-IEVGFVGRDNN---CSTGLKNIGLCLVPVSMAINYF
        +S MD  SSKQ+K+ +     A INQTKHKGK  E++GEVEDR I+VG VGRDNN   CSTGLKNIGLCLVPVSMA+NYF
Subjt:  ISDMDGLSSKQKKQLQQQQLSAMINQTKHKGKEIEEFGEVEDR-IEVGFVGRDNN---CSTGLKNIGLCLVPVSMAINYF

A0A5D3BKS2 Putative CTD small phosphatase-like protein 24.3e-3254.44Show/hide
Query:  MENSAISRICTQKQVDQ------DHSSW--TSSMDDLLLFDHSKTI---SYHFQNAAVFSSS---------------------DDDDLQDTATSPPHPSI
        MENSA SRIC+  + D+      +  SW  +SSMDDLL+FD   TI   SY F    +  SS                      DDDL+DTATSPPHPSI
Subjt:  MENSAISRICTQKQVDQ------DHSSW--TSSMDDLLLFDHSKTI---SYHFQNAAVFSSS---------------------DDDDLQDTATSPPHPSI

Query:  ISDMDGLSSKQKKQLQQQQLSAMINQTKHKGKEIEEFGEVEDR-IEVGFVGRDNN---CSTGLKNIGLCLVPVSMAINYF
        +S MD  SSKQ+K+ +     A INQTKHKGK  E++GEVEDR I+VG VGRDNN   CSTGLKNIGLCLVPVSMA+NYF
Subjt:  ISDMDGLSSKQKKQLQQQQLSAMINQTKHKGKEIEEFGEVEDR-IEVGFVGRDNN---CSTGLKNIGLCLVPVSMAINYF

A0A6J1FU25 uncharacterized protein LOC1114468884.5e-74100Show/hide
Query:  MENSAISRICTQKQVDQDHSSWTSSMDDLLLFDHSKTISYHFQNAAVFSSSDDDDLQDTATSPPHPSIISDMDGLSSKQKKQLQQQQLSAMINQTKHKGK
        MENSAISRICTQKQVDQDHSSWTSSMDDLLLFDHSKTISYHFQNAAVFSSSDDDDLQDTATSPPHPSIISDMDGLSSKQKKQLQQQQLSAMINQTKHKGK
Subjt:  MENSAISRICTQKQVDQDHSSWTSSMDDLLLFDHSKTISYHFQNAAVFSSSDDDDLQDTATSPPHPSIISDMDGLSSKQKKQLQQQQLSAMINQTKHKGK

Query:  EIEEFGEVEDRIEVGFVGRDNNCSTGLKNIGLCLVPVSMAINYFG
        EIEEFGEVEDRIEVGFVGRDNNCSTGLKNIGLCLVPVSMAINYFG
Subjt:  EIEEFGEVEDRIEVGFVGRDNNCSTGLKNIGLCLVPVSMAINYFG

A0A6J1JN91 uncharacterized protein LOC1114868251.1e-6794.52Show/hide
Query:  MENSAISRICTQKQVDQDHSSWTSSMDDLLLFDHSKTISYHFQNAAVFSSS-DDDDLQDTATSPPHPSIISDMDGLSSKQKKQLQQQQLSAMINQTKHKG
        MENSAIS+ICTQKQVDQDHSSWTSSMDDLLLFD+SKT SYHFQNAAVFSSS DDDDLQDTATSPPHPSIISDMDGLSSKQKKQ QQQQ +AMINQTKH+G
Subjt:  MENSAISRICTQKQVDQDHSSWTSSMDDLLLFDHSKTISYHFQNAAVFSSS-DDDDLQDTATSPPHPSIISDMDGLSSKQKKQLQQQQLSAMINQTKHKG

Query:  KEIEEFGEVEDRIEVGFVGRDNNCSTGLKNIGLCLVPVSMAINYFG
        KEIEEFGEVEDRIEVGFVGRDNNCSTGLKNIGLCLVPVSMAINYFG
Subjt:  KEIEEFGEVEDRIEVGFVGRDNNCSTGLKNIGLCLVPVSMAINYFG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAACTCGGCCATCTCCAGAATCTGCACCCAGAAGCAGGTGGATCAGGATCACAGTAGCTGGACTTCCTCCATGGACGACCTCCTCTTATTCGACCACTCTAAAAC
AATTTCATATCACTTTCAAAACGCCGCCGTCTTTTCTTCCTCCGATGACGACGATCTCCAAGACACTGCAACTTCTCCGCCTCATCCTTCCATAATTTCCGACATGGATG
GGCTTAGCTCCAAGCAAAAGAAGCAGCTGCAGCAGCAGCAGCTCAGTGCCATGATCAATCAAACAAAACACAAAGGAAAAGAAATTGAGGAATTTGGGGAAGTTGAAGAT
AGAATTGAAGTGGGTTTTGTGGGGAGGGATAATAATTGTAGCACAGGGCTCAAGAACATTGGCCTTTGCTTGGTTCCTGTATCCATGGCTATCAATTATTTTGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAAACTCGGCCATCTCCAGAATCTGCACCCAGAAGCAGGTGGATCAGGATCACAGTAGCTGGACTTCCTCCATGGACGACCTCCTCTTATTCGACCACTCTAAAAC
AATTTCATATCACTTTCAAAACGCCGCCGTCTTTTCTTCCTCCGATGACGACGATCTCCAAGACACTGCAACTTCTCCGCCTCATCCTTCCATAATTTCCGACATGGATG
GGCTTAGCTCCAAGCAAAAGAAGCAGCTGCAGCAGCAGCAGCTCAGTGCCATGATCAATCAAACAAAACACAAAGGAAAAGAAATTGAGGAATTTGGGGAAGTTGAAGAT
AGAATTGAAGTGGGTTTTGTGGGGAGGGATAATAATTGTAGCACAGGGCTCAAGAACATTGGCCTTTGCTTGGTTCCTGTATCCATGGCTATCAATTATTTTGGTTAG
Protein sequenceShow/hide protein sequence
MENSAISRICTQKQVDQDHSSWTSSMDDLLLFDHSKTISYHFQNAAVFSSSDDDDLQDTATSPPHPSIISDMDGLSSKQKKQLQQQQLSAMINQTKHKGKEIEEFGEVED
RIEVGFVGRDNNCSTGLKNIGLCLVPVSMAINYFG