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CmoCh04G010810 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G010810
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionExtensin-like
Genome locationCmo_Chr04:5448107..5448484
RNA-Seq ExpressionCmoCh04G010810
SyntenyCmoCh04G010810
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600825.1 hypothetical protein SDJN03_06058, partial [Cucurbita argyrosperma subsp. sororia]3.4e-5695.2Show/hide
Query:  MCIQTRPRYALFILSFFFFFLSTNVVLTHGFLSSKKLDESTGGDDPSVKCTPCTHNPPPPPPPPKKPSPAYCPPPPPPPSSFIYILGPPGNLYPIDRDFA
        MCIQTRPRYALFI S FFF LS NVVLTHGFLSSKKLDESTGGDDP VKCTPCTHNPPPPPPPPKKPSPAYCPPPPPPPSSFIYILGPPGNLYPIDRDFA
Subjt:  MCIQTRPRYALFILSFFFFFLSTNVVLTHGFLSSKKLDESTGGDDPSVKCTPCTHNPPPPPPPPKKPSPAYCPPPPPPPSSFIYILGPPGNLYPIDRDFA

Query:  GADRRRVAVELSAVALFGLIGFLGV
        GADRRRV VELSAVALFGLIGFLGV
Subjt:  GADRRRVAVELSAVALFGLIGFLGV

KAG7031461.1 hypothetical protein SDJN02_05501, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-5594.4Show/hide
Query:  MCIQTRPRYALFILSFFFFFLSTNVVLTHGFLSSKKLDESTGGDDPSVKCTPCTHNPPPPPPPPKKPSPAYCPPPPPPPSSFIYILGPPGNLYPIDRDFA
        MCIQTRPRYALFI S F F LS NVVLTHGFLSSKKLDESTGGDDP VKCTPCTHNPPPPPPPPKKPSPAYCPPPPPPPSSFIYILGPPGNLYPIDRDFA
Subjt:  MCIQTRPRYALFILSFFFFFLSTNVVLTHGFLSSKKLDESTGGDDPSVKCTPCTHNPPPPPPPPKKPSPAYCPPPPPPPSSFIYILGPPGNLYPIDRDFA

Query:  GADRRRVAVELSAVALFGLIGFLGV
        GADRRRV VELSAVALFGLIGFLGV
Subjt:  GADRRRVAVELSAVALFGLIGFLGV

KGN50831.1 hypothetical protein Csa_004723 [Cucumis sativus]1.2e-3267.2Show/hide
Query:  MCIQTRPRYALFILSFFFFFLSTNVVLTHGFLSSKKLDESTGGDDPSVKCTPCTHNPPPPPPPPKKPSPAYCPPPPPPPSSFIYILGPPGNLYPIDRDFA
        MCIQ  P Y+L IL  FF  LS N+   HGF+SSKKLDE     D SVKCTPCT   PPPPPPPKKP P YCPPPP PPSSFIY+LGPP NLYPI+ DFA
Subjt:  MCIQTRPRYALFILSFFFFFLSTNVVLTHGFLSSKKLDESTGGDDPSVKCTPCTHNPPPPPPPPKKPSPAYCPPPPPPPSSFIYILGPPGNLYPIDRDFA

Query:  GADRRRVAVELSAVALFGLIGFLGV
         ADRR VA+EL  VA FGLIG + +
Subjt:  GADRRRVAVELSAVALFGLIGFLGV

XP_022942055.1 probable glycosyltransferase 4 [Cucurbita moschata]3.5e-61100Show/hide
Query:  MCIQTRPRYALFILSFFFFFLSTNVVLTHGFLSSKKLDESTGGDDPSVKCTPCTHNPPPPPPPPKKPSPAYCPPPPPPPSSFIYILGPPGNLYPIDRDFA
        MCIQTRPRYALFILSFFFFFLSTNVVLTHGFLSSKKLDESTGGDDPSVKCTPCTHNPPPPPPPPKKPSPAYCPPPPPPPSSFIYILGPPGNLYPIDRDFA
Subjt:  MCIQTRPRYALFILSFFFFFLSTNVVLTHGFLSSKKLDESTGGDDPSVKCTPCTHNPPPPPPPPKKPSPAYCPPPPPPPSSFIYILGPPGNLYPIDRDFA

Query:  GADRRRVAVELSAVALFGLIGFLGV
        GADRRRVAVELSAVALFGLIGFLGV
Subjt:  GADRRRVAVELSAVALFGLIGFLGV

XP_023546806.1 formin-like protein 20 [Cucurbita pepo subsp. pepo]2.5e-5997.6Show/hide
Query:  MCIQTRPRYALFILSFFFFFLSTNVVLTHGFLSSKKLDESTGGDDPSVKCTPCTHNPPPPPPPPKKPSPAYCPPPPPPPSSFIYILGPPGNLYPIDRDFA
        MCIQTRPRYALFI SFF FFLS NVVLTHGFLSSKKLDESTGGDDPSVKCTPCTHNPPPPPPPPKKPSPAYCPPPPPPPSSFIYILGPPGNLYPIDRDFA
Subjt:  MCIQTRPRYALFILSFFFFFLSTNVVLTHGFLSSKKLDESTGGDDPSVKCTPCTHNPPPPPPPPKKPSPAYCPPPPPPPSSFIYILGPPGNLYPIDRDFA

Query:  GADRRRVAVELSAVALFGLIGFLGV
        GADRRRVAVELSAVALFGLIGFLGV
Subjt:  GADRRRVAVELSAVALFGLIGFLGV

TrEMBL top hitse value%identityAlignment
A0A0A0KSV7 Uncharacterized protein5.7e-3367.2Show/hide
Query:  MCIQTRPRYALFILSFFFFFLSTNVVLTHGFLSSKKLDESTGGDDPSVKCTPCTHNPPPPPPPPKKPSPAYCPPPPPPPSSFIYILGPPGNLYPIDRDFA
        MCIQ  P Y+L IL  FF  LS N+   HGF+SSKKLDE     D SVKCTPCT   PPPPPPPKKP P YCPPPP PPSSFIY+LGPP NLYPI+ DFA
Subjt:  MCIQTRPRYALFILSFFFFFLSTNVVLTHGFLSSKKLDESTGGDDPSVKCTPCTHNPPPPPPPPKKPSPAYCPPPPPPPSSFIYILGPPGNLYPIDRDFA

Query:  GADRRRVAVELSAVALFGLIGFLGV
         ADRR VA+EL  VA FGLIG + +
Subjt:  GADRRRVAVELSAVALFGLIGFLGV

A0A5C7HJP2 Uncharacterized protein2.7e-1451.75Show/hide
Query:  HGFLSSKKLDESTGGDDPSVKCTPC---THNPPPPPPPPKKPSPAYCPPPPPPPS--------------SFIYILGPPGNLYPIDRDFAGADRRRVAVEL
        +G   S+KLDESTGG D  VKCTP    T +PPPP PPP  P P   PPPPPPP+              SFIY+ GPPG+LYPID DF+GA RR++   +
Subjt:  HGFLSSKKLDESTGGDDPSVKCTPC---THNPPPPPPPPKKPSPAYCPPPPPPPS--------------SFIYILGPPGNLYPIDRDFAGADRRRVAVEL

Query:  SAVALFGLIGFLGV
        S++ L G +G LGV
Subjt:  SAVALFGLIGFLGV

A0A6A3B336 Extensin-like3.5e-1451.15Show/hide
Query:  FILSFFFFFLSTNVVLTHGFLSSKKLDESTGGDDPSVKCTP-CTHNPPP---------------PPPPPKKPSPAYCPPPPPPPS--SFIYILGPPGNLY
        F+ S   FF+ T        L S+KLDEST   D  VKCTP C  +PPP               PPP PKKP   YCPPPP PPS  S+IYI GPPGNLY
Subjt:  FILSFFFFFLSTNVVLTHGFLSSKKLDESTGGDDPSVKCTP-CTHNPPP---------------PPPPPKKPSPAYCPPPPPPPS--SFIYILGPPGNLY

Query:  PIDRDFAGADRRRVAVELSAV--ALFGLIGF
        P D+ F GAD R VAV L A+   LF L+GF
Subjt:  PIDRDFAGADRRRVAVELSAV--ALFGLIGF

A0A6J1DRJ1 acrosin-like5.9e-3066.93Show/hide
Query:  MCIQTRPRYALFILSFFFFFLSTNVVLTHGFLSSKKLDESTGGDDPSVKCTPCT--HNPPPPPPPPKKPSPAYCPPPPPPPSSFIYILGPPGNLYPIDRD
        M IQT+    L ILS        NVV  HG +SS KLD STGGD  +VKCTPCT  + PPPPPPPPKKP  +YCPPPPPPPSSFIY+LGPPGNLYPI +D
Subjt:  MCIQTRPRYALFILSFFFFFLSTNVVLTHGFLSSKKLDESTGGDDPSVKCTPCT--HNPPPPPPPPKKPSPAYCPPPPPPPSSFIYILGPPGNLYPIDRD

Query:  FAGADRRRVAVELSAVALFGLIGFLGV
        FAG  RRRVAVEL  VAL GL+GF+ V
Subjt:  FAGADRRRVAVELSAVALFGLIGFLGV

A0A6J1FVH5 probable glycosyltransferase 41.7e-61100Show/hide
Query:  MCIQTRPRYALFILSFFFFFLSTNVVLTHGFLSSKKLDESTGGDDPSVKCTPCTHNPPPPPPPPKKPSPAYCPPPPPPPSSFIYILGPPGNLYPIDRDFA
        MCIQTRPRYALFILSFFFFFLSTNVVLTHGFLSSKKLDESTGGDDPSVKCTPCTHNPPPPPPPPKKPSPAYCPPPPPPPSSFIYILGPPGNLYPIDRDFA
Subjt:  MCIQTRPRYALFILSFFFFFLSTNVVLTHGFLSSKKLDESTGGDDPSVKCTPCTHNPPPPPPPPKKPSPAYCPPPPPPPSSFIYILGPPGNLYPIDRDFA

Query:  GADRRRVAVELSAVALFGLIGFLGV
        GADRRRVAVELSAVALFGLIGFLGV
Subjt:  GADRRRVAVELSAVALFGLIGFLGV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G02405.1 proline-rich family protein8.5e-0547.62Show/hide
Query:  PSVKCTPCTHNPPPP-PPPPKKPS--PAYCPPPPPPPSSFIYILGPPGNLYPIDRDFAGADRRRVAVELSAVA---LFGLIGFL
        PS     CT +PPPP PPPPKK S  P+  PPPPPPP        PPG+LYPI+  +  A    VAVE  +V    +FG++ FL
Subjt:  PSVKCTPCTHNPPPP-PPPPKKPS--PAYCPPPPPPPSSFIYILGPPGNLYPIDRDFAGADRRRVAVELSAVA---LFGLIGFL

AT1G23040.1 hydroxyproline-rich glycoprotein family protein1.5e-1446.36Show/hide
Query:  LSSKKLDESTGGDDPSVKCTP-CTHNPPPPPPPPKKPSPAYCPP----------------PPPPPSSFIYILGPPGNLYPIDRDF-AGADRRRVAVELSA
        L ++KLDE     DP +KC+P C  NPPPP PPP  P P  CPP                PPPPP++F+YI GPPGNLYP+D  F A A +  + V+LS 
Subjt:  LSSKKLDESTGGDDPSVKCTP-CTHNPPPPPPPPKKPSPAYCPP----------------PPPPPSSFIYILGPPGNLYPIDRDF-AGADRRRVAVELSA

Query:  VALFGLIGFL
        +  FG++ FL
Subjt:  VALFGLIGFL

AT1G70990.1 proline-rich family protein3.2e-1242.5Show/hide
Query:  LSTNVVLTHGFLSSKKLDESTGG--DDPSVKCTPCTHN-PPPPPPPPKKPSPAY-CPPP------------PPPPSSFIYILGPPGNLYPIDRDF-AGAD
        L+T V LT   + +   D ST    ++  +KCTPC  N PPP PPPP  P P+  CPPP            PPPPS++IY+ GPPG LYPID+ F A   
Subjt:  LSTNVVLTHGFLSSKKLDESTGG--DDPSVKCTPCTHN-PPPPPPPPKKPSPAY-CPPP------------PPPPSSFIYILGPPGNLYPIDRDF-AGAD

Query:  RRRVAVELSAVALFGLIGFL
        +    V++S +  FG++ FL
Subjt:  RRRVAVELSAVALFGLIGFL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCATCCAAACGAGGCCTCGTTATGCTCTGTTCATCCTCAGCTTCTTCTTCTTCTTTCTTTCAACCAATGTAGTACTCACCCATGGCTTCCTCTCTTCCAAGAAGCT
TGATGAATCCACCGGCGGGGACGATCCCAGCGTCAAGTGTACACCCTGCACCCATAATCCGCCACCCCCACCACCCCCACCGAAGAAACCGTCACCGGCCTACTGCCCTC
CTCCACCGCCTCCTCCGTCGTCTTTCATTTACATACTCGGCCCCCCCGGAAACTTGTATCCCATTGACCGGGACTTCGCCGGTGCTGATCGAAGGAGGGTAGCCGTGGAG
TTGTCGGCGGTTGCTCTCTTTGGATTGATTGGTTTTCTTGGAGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGCATCCAAACGAGGCCTCGTTATGCTCTGTTCATCCTCAGCTTCTTCTTCTTCTTTCTTTCAACCAATGTAGTACTCACCCATGGCTTCCTCTCTTCCAAGAAGCT
TGATGAATCCACCGGCGGGGACGATCCCAGCGTCAAGTGTACACCCTGCACCCATAATCCGCCACCCCCACCACCCCCACCGAAGAAACCGTCACCGGCCTACTGCCCTC
CTCCACCGCCTCCTCCGTCGTCTTTCATTTACATACTCGGCCCCCCCGGAAACTTGTATCCCATTGACCGGGACTTCGCCGGTGCTGATCGAAGGAGGGTAGCCGTGGAG
TTGTCGGCGGTTGCTCTCTTTGGATTGATTGGTTTTCTTGGAGTTTGA
Protein sequenceShow/hide protein sequence
MCIQTRPRYALFILSFFFFFLSTNVVLTHGFLSSKKLDESTGGDDPSVKCTPCTHNPPPPPPPPKKPSPAYCPPPPPPPSSFIYILGPPGNLYPIDRDFAGADRRRVAVE
LSAVALFGLIGFLGV