CuGenDBv2

Gene ID	CmoCh04G011000
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Integrator complex subunit 7
Genome location	Cmo_Chr04:5598374..5602804
RNA-Seq Expression	CmoCh04G011000
Synteny	CmoCh04G011000
Gene Ontology terms	GO:0016180 - snRNA processing (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0032039 - integrator complex (cellular component)
InterPro domains	IPR011989 - Armadillo-like helical IPR016024 - Armadillo-type fold IPR033060 - Integrator complex subunit 7

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6600845.1 Integrator complex subunit 7-like protein, partial [Cucurbita argyrosperma subsp. sororia]

1.7e-186

94.62

Show/hide

Query:  MCDCYWFEYLHHMERNAAACAMEWSIELEKALRSKKPGRAVEAILQIGSRLQQWSREPEPNIAVYNMFDLVTWEDRLFSNTILLRLADAFKSDDKHIRVA
        MCDCYWFEYLHHMERNAAACAMEWSIELEKALRSKKPGRAVEAILQIGSRLQQWSREPEPNIAVYNMFDLVTWEDRLFSNTILLRLADAFKSDDKHIRVA
Subjt:  MCDCYWFEYLHHMERNAAACAMEWSIELEKALRSKKPGRAVEAILQIGSRLQQWSREPEPNIAVYNMFDLVTWEDRLFSNTILLRLADAFKSDDKHIRVA

Query:  VVKVFLSELNSRDRTKSKQYQGVLSKARVQNHHELLTRVKVVLGGGDPEARALALILLGCWAHFAEGSAQIRYMILSSMLSSHISEVKASIFAAACISQL
        VVKVFLSELNSRDRTKSKQYQGVLSKARVQNHHELLTRVKVVLGGGDPEARALALILLGCWAHFAEGSAQIRYMILSSMLSSHISEVKASIFAAACISQL
Subjt:  VVKVFLSELNSRDRTKSKQYQGVLSKARVQNHHELLTRVKVVLGGGDPEARALALILLGCWAHFAEGSAQIRYMILSSMLSSHISEVKASIFAAACISQL

Query:  ADDFAQVFLAILVNIMTSTTSLAIKMAGARVFAKLGCSHSMAKTAYKAGLELASNSSEEDFLVAMLFSLSKLASKSVFISSEQDFDLLNHRMLLLVYDVP
        ADDFAQVFLAILVNIMTSTTSLAIKMAGARVFAKLGCSHSMAKTAYKAGLELASNSSEEDFLVAMLFSLSKLASKSVFISSE                  
Subjt:  ADDFAQVFLAILVNIMTSTTSLAIKMAGARVFAKLGCSHSMAKTAYKAGLELASNSSEEDFLVAMLFSLSKLASKSVFISSEQDFDLLNHRMLLLVYDVP

Query:  TQVKFLCSFLSDKKSARVQETSLRCLRFIFMKGECLFTNMESVVRILVDALDEPMLTTTSHCDVLRLLRKVI
         QVKFLCSFLSDKKSARVQETSLRCLRFIFMKGECLFTNMESVVRILVDALDEPMLTTTSHCDVLRLLRK+I
Subjt:  TQVKFLCSFLSDKKSARVQETSLRCLRFIFMKGECLFTNMESVVRILVDALDEPMLTTTSHCDVLRLLRKVI

KAG7031480.1 Integrator complex subunit 7-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]

4.9e-186

94.35

Show/hide

Query:  MCDCYWFEYLHHMERNAAACAMEWSIELEKALRSKKPGRAVEAILQIGSRLQQWSREPEPNIAVYNMFDLVTWEDRLFSNTILLRLADAFKSDDKHIRVA
        MCDCYWFEYLHHMERNAAACAMEWSIELEKALRSKKPGRAVEAILQIGSRLQQWSREPEPNIAVYNMFDLVTWEDRLFSNTILLRLADAFKSDDKHIRVA
Subjt:  MCDCYWFEYLHHMERNAAACAMEWSIELEKALRSKKPGRAVEAILQIGSRLQQWSREPEPNIAVYNMFDLVTWEDRLFSNTILLRLADAFKSDDKHIRVA

Query:  VVKVFLSELNSRDRTKSKQYQGVLSKARVQNHHELLTRVKVVLGGGDPEARALALILLGCWAHFAEGSAQIRYMILSSMLSSHISEVKASIFAAACISQL
        VVKVFLSELNSRDRTKSKQYQGVLSKARVQNHHELLTRVKVVLGGGDPEARALALILLGCWAHFAEGSAQIRYMILSSMLSSHISEVKASIFAAACISQL
Subjt:  VVKVFLSELNSRDRTKSKQYQGVLSKARVQNHHELLTRVKVVLGGGDPEARALALILLGCWAHFAEGSAQIRYMILSSMLSSHISEVKASIFAAACISQL

Query:  ADDFAQVFLAILVNIMTSTTSLAIKMAGARVFAKLGCSHSMAKTAYKAGLELASNSSEEDFLVAMLFSLSKLASKSVFISSEQDFDLLNHRMLLLVYDVP
        ADDFAQVFLAILVNIMTSTTSLAIKMAGARVFAKLGCSHSMAKTAYKAGLELASNSSEEDFLVAMLFSLSKLASKSVFISSE                  
Subjt:  ADDFAQVFLAILVNIMTSTTSLAIKMAGARVFAKLGCSHSMAKTAYKAGLELASNSSEEDFLVAMLFSLSKLASKSVFISSEQDFDLLNHRMLLLVYDVP

Query:  TQVKFLCSFLSDKKSARVQETSLRCLRFIFMKGECLFTNMESVVRILVDALDEPMLTTTSHCDVLRLLRKVI
         QVKFLCSFLSDKKS RVQETSLRCLRFIFMKGECLFTNMESVVRILVDALDEPMLTTTSHCDVLRLLRK+I
Subjt:  TQVKFLCSFLSDKKSARVQETSLRCLRFIFMKGECLFTNMESVVRILVDALDEPMLTTTSHCDVLRLLRKVI

XP_022942067.1 uncharacterized protein LOC111447255 [Cucurbita moschata]

1.7e-186

94.62

Show/hide

Query:  MCDCYWFEYLHHMERNAAACAMEWSIELEKALRSKKPGRAVEAILQIGSRLQQWSREPEPNIAVYNMFDLVTWEDRLFSNTILLRLADAFKSDDKHIRVA
        MCDCYWFEYLHHMERNAAACAMEWSIELEKALRSKKPGRAVEAILQIGSRLQQWSREPEPNIAVYNMFDLVTWEDRLFSNTILLRLADAFKSDDKHIRVA
Subjt:  MCDCYWFEYLHHMERNAAACAMEWSIELEKALRSKKPGRAVEAILQIGSRLQQWSREPEPNIAVYNMFDLVTWEDRLFSNTILLRLADAFKSDDKHIRVA

Query:  VVKVFLSELNSRDRTKSKQYQGVLSKARVQNHHELLTRVKVVLGGGDPEARALALILLGCWAHFAEGSAQIRYMILSSMLSSHISEVKASIFAAACISQL
        VVKVFLSELNSRDRTKSKQYQGVLSKARVQNHHELLTRVKVVLGGGDPEARALALILLGCWAHFAEGSAQIRYMILSSMLSSHISEVKASIFAAACISQL
Subjt:  VVKVFLSELNSRDRTKSKQYQGVLSKARVQNHHELLTRVKVVLGGGDPEARALALILLGCWAHFAEGSAQIRYMILSSMLSSHISEVKASIFAAACISQL

Query:  ADDFAQVFLAILVNIMTSTTSLAIKMAGARVFAKLGCSHSMAKTAYKAGLELASNSSEEDFLVAMLFSLSKLASKSVFISSEQDFDLLNHRMLLLVYDVP
        ADDFAQVFLAILVNIMTSTTSLAIKMAGARVFAKLGCSHSMAKTAYKAGLELASNSSEEDFLVAMLFSLSKLASKSVFISSE                  
Subjt:  ADDFAQVFLAILVNIMTSTTSLAIKMAGARVFAKLGCSHSMAKTAYKAGLELASNSSEEDFLVAMLFSLSKLASKSVFISSEQDFDLLNHRMLLLVYDVP

Query:  TQVKFLCSFLSDKKSARVQETSLRCLRFIFMKGECLFTNMESVVRILVDALDEPMLTTTSHCDVLRLLRKVI
         QVKFLCSFLSDKKSARVQETSLRCLRFIFMKGECLFTNMESVVRILVDALDEPMLTTTSHCDVLRLLRK+I
Subjt:  TQVKFLCSFLSDKKSARVQETSLRCLRFIFMKGECLFTNMESVVRILVDALDEPMLTTTSHCDVLRLLRKVI

XP_022987837.1 uncharacterized protein LOC111485260 [Cucurbita maxima]

8.9e-172

91.67

Show/hide

Query:  MERNAAACAMEWSIELEKALRSKKPGRAVEAILQIGSRLQQWSREPEPNIAVYNMFDLVTWEDRLFSNTILLRLADAFKSDDKHIRVAVVKVFLSELNSR
        MERNAAA AMEWSIELEKALRSKKPGRAVEAILQIGSRLQQWSREPEPNIAVYNMFDLVTWEDRLFSNTILLRLADAFKSDDKHIRVAVV+VFLSELNSR
Subjt:  MERNAAACAMEWSIELEKALRSKKPGRAVEAILQIGSRLQQWSREPEPNIAVYNMFDLVTWEDRLFSNTILLRLADAFKSDDKHIRVAVVKVFLSELNSR

Query:  DRTKSKQYQGVLSKARVQNHHELLTRVKVVLGGGDPEARALALILLGCWAHFAEGSAQIRYMILSSMLSSHISEVKASIFAAACISQLADDFAQVFLAIL
        DRTKS+QYQGVLSKARVQNHHELLTRVKVVLGGGDPEARALALILLGCWAHFAEGSAQIRYMIL S+LSSHISEVKASIFAAACISQLADDFA+VFLAIL
Subjt:  DRTKSKQYQGVLSKARVQNHHELLTRVKVVLGGGDPEARALALILLGCWAHFAEGSAQIRYMILSSMLSSHISEVKASIFAAACISQLADDFAQVFLAIL

Query:  VNIMTSTTSLAIKMAGARVFAKLGCSHSMAKTAYKAGLELASNSSEEDFLVAMLFSLSKLASKSVFISSEQDFDLLNHRMLLLVYDVPTQVKFLCSFLSD
        VNIMTSTTSLA+KMAGARVFAKLGCSHSMAKTAYKAGLELAS+SSEEDFLVAMLFSLSKLASKSVFISSE                   QVK LCSFLSD
Subjt:  VNIMTSTTSLAIKMAGARVFAKLGCSHSMAKTAYKAGLELASNSSEEDFLVAMLFSLSKLASKSVFISSEQDFDLLNHRMLLLVYDVPTQVKFLCSFLSD

Query:  KKSARVQETSLRCLRFIFMKGECLFTNMESVVRILVDALDEPMLTTTSHCDVLRLLRKVI
        KKS RVQETSLRCLRFIFMKGECLFTNMESVVRILVDALDEPMLTTTSHCDVLRLLRK+I
Subjt:  KKSARVQETSLRCLRFIFMKGECLFTNMESVVRILVDALDEPMLTTTSHCDVLRLLRKVI

XP_023551506.1 uncharacterized protein LOC111809292 [Cucurbita pepo subsp. pepo]

8.1e-173

92.5

Show/hide

Query:  MERNAAACAMEWSIELEKALRSKKPGRAVEAILQIGSRLQQWSREPEPNIAVYNMFDLVTWEDRLFSNTILLRLADAFKSDDKHIRVAVVKVFLSELNSR
        MERNAAACAMEWSIELEKALRSKKPGRAVEAIL+IGSRLQQWSREPEPNIAVYNMFDLVTWEDRLFSNTILLRLADAFKSDDKHIRVAVVKVFLSELNSR
Subjt:  MERNAAACAMEWSIELEKALRSKKPGRAVEAILQIGSRLQQWSREPEPNIAVYNMFDLVTWEDRLFSNTILLRLADAFKSDDKHIRVAVVKVFLSELNSR

Query:  DRTKSKQYQGVLSKARVQNHHELLTRVKVVLGGGDPEARALALILLGCWAHFAEGSAQIRYMILSSMLSSHISEVKASIFAAACISQLADDFAQVFLAIL
        DRTKSKQYQGVLSKARVQNHHELLTRVKVVLGGGDPEARALALILLGCWAHFAEGSAQIRYMILSSMLSSHISEVKASIFAAACISQLADDFAQVFLAIL
Subjt:  DRTKSKQYQGVLSKARVQNHHELLTRVKVVLGGGDPEARALALILLGCWAHFAEGSAQIRYMILSSMLSSHISEVKASIFAAACISQLADDFAQVFLAIL

Query:  VNIMTSTTSLAIKMAGARVFAKLGCSHSMAKTAYKAGLELASNSSEEDFLVAMLFSLSKLASKSVFISSEQDFDLLNHRMLLLVYDVPTQVKFLCSFLSD
        VNIMTSTTSLAIKMAGARVFAKLGCSHSMAKTAYKAGLELAS+ SEEDFLVAMLFSLSKLASKSVFISSE                   QVK LCSFLSD
Subjt:  VNIMTSTTSLAIKMAGARVFAKLGCSHSMAKTAYKAGLELASNSSEEDFLVAMLFSLSKLASKSVFISSEQDFDLLNHRMLLLVYDVPTQVKFLCSFLSD

Query:  KKSARVQETSLRCLRFIFMKGECLFTNMESVVRILVDALDEPMLTTTSHCDVLRLLRKVI
        KKS RVQETSLRCLRFIFMKGEC FT+MESVVRILVDALDEPMLTTTSHCDVLRLLRK+I
Subjt:  KKSARVQETSLRCLRFIFMKGECLFTNMESVVRILVDALDEPMLTTTSHCDVLRLLRKVI

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KJG8 Uncharacterized protein

1.8e-109

88.24

Show/hide

Query:  MERNAAACAMEWSIELEKALRSKKPGRAVEAILQIGSRLQQWSREPEPNIAVYNMFDLVTWEDRLFSNTILLRLADAFKSDDKHIRVAVVKVFLSELNSR
        MER++AACAMEWSIELEKALR KKPGRAVEAI QIG RLQQWSREPEPN+AVYNMFDLVTWEDRLFSNTILLRLADAFK DDKHIR+AVV+VFLSEL SR
Subjt:  MERNAAACAMEWSIELEKALRSKKPGRAVEAILQIGSRLQQWSREPEPNIAVYNMFDLVTWEDRLFSNTILLRLADAFKSDDKHIRVAVVKVFLSELNSR

Query:  DRTKSKQYQGVLSKARVQNHHELLTRVKVVLGGGDPEARALALILLGCWAHFAEGSAQIRYMILSSMLSSHISEVKASIFAAACISQLADDFAQVFLAIL
        D ++SKQYQG+LSKARVQNHHELLTRVKVVL GGDPEAR LALILLGCWAHFA+ SAQIRY+I SS+ SSH+SEVKASIFAAACI QLADDFAQVFLAIL
Subjt:  DRTKSKQYQGVLSKARVQNHHELLTRVKVVLGGGDPEARALALILLGCWAHFAEGSAQIRYMILSSMLSSHISEVKASIFAAACISQLADDFAQVFLAIL

Query:  VNIMTSTTSLAIKMAGARVFAKLGCSHSMAKTAYKAGL
        VNIMTSTTSL I+MAGARVFAKLGCSHSMAKTAYK  L
Subjt:  VNIMTSTTSLAIKMAGARVFAKLGCSHSMAKTAYKAGL

A0A1S3CMM3 uncharacterized protein LOC103502541 isoform X1

2.9e-152

81.11

Show/hide

Query:  MERNAAACAMEWSIELEKALRSKKPGRAVEAILQIGSRLQQWSREPEPNIAVYNMFDLVTWEDRLFSNTILLRLADAFKSDDKHIRVAVVKVFLSELNSR
        MERN+AACAMEWSIELEKALR KKPGRAVEAI QIG RLQQWSREPEPNIAVYNMFDLVTWED+LFSNTILLRLADAFK DDKHIR+AVV+VFLSEL SR
Subjt:  MERNAAACAMEWSIELEKALRSKKPGRAVEAILQIGSRLQQWSREPEPNIAVYNMFDLVTWEDRLFSNTILLRLADAFKSDDKHIRVAVVKVFLSELNSR

Query:  DRTKSKQYQGVLSKARVQNHHELLTRVKVVLGGGDPEARALALILLGCWAHFAEGSAQIRYMILSSMLSSHISEVKASIFAAACISQLADDFAQVFLAIL
        D ++SKQYQG+LSKARVQN HELLTRVKVVL GGDPEA+ALALI+LGCWAHFA+ SAQIRY+I  S+ SSH+SEVKASIFAAACISQLADDFAQVFL IL
Subjt:  DRTKSKQYQGVLSKARVQNHHELLTRVKVVLGGGDPEARALALILLGCWAHFAEGSAQIRYMILSSMLSSHISEVKASIFAAACISQLADDFAQVFLAIL

Query:  VNIMTSTTSLAIKMAGARVFAKLGCSHSMAKTAYKAGLELASNSSEEDFLVAMLFSLSKLASKSVFISSEQDFDLLNHRMLLLVYDVPTQVKFLCSFLSD
        VNIMTSTTSLAI+MAGARVFAKLGCSHSMAKTAYKAGLELAS++SEE FL+AMLFSLSKLASKS+FISSE                   QV+FLCSFLS 
Subjt:  VNIMTSTTSLAIKMAGARVFAKLGCSHSMAKTAYKAGLELASNSSEEDFLVAMLFSLSKLASKSVFISSEQDFDLLNHRMLLLVYDVPTQVKFLCSFLSD

Query:  KKSARVQETSLRCLRFIFMKGECLFTNMESVVRILVDALDEPMLTTTSHCDVLRLLRKVI
        KKS RV++TSLRCL FIFMKG C F NMESVV+IL+DALDE ML T+SHCD LRLL+K+I
Subjt:  KKSARVQETSLRCLRFIFMKGECLFTNMESVVRILVDALDEPMLTTTSHCDVLRLLRKVI

A0A6J1DXI9 uncharacterized protein LOC111024400

6.7e-149

78.89

Show/hide

Query:  MERNAAACAMEWSIELEKALRSKKPGRAVEAILQIGSRLQQWSREPEPNIAVYNMFDLVTWEDRLFSNTILLRLADAFKSDDKHIRVAVVKVFLSELNSR
        MERNAAACAMEWSIELEKALRSKK GRA EAILQIGSRLQQWSREPEPN+AVYNMFDLVTWEDRLFSNTILLRLA+AFK DDKHIR AVV+VFLSEL SR
Subjt:  MERNAAACAMEWSIELEKALRSKKPGRAVEAILQIGSRLQQWSREPEPNIAVYNMFDLVTWEDRLFSNTILLRLADAFKSDDKHIRVAVVKVFLSELNSR

Query:  DRTKSKQYQGVLSKARVQNHHELLTRVKVVLGGGDPEARALALILLGCWAHFAEGSAQIRYMILSSMLSSHISEVKASIFAAACISQLADDFAQVFLAIL
        D+T+SKQYQG+LSKARVQNHHELLTRVKVVL GGDPE+RALAL+L GCWAHFA+ S QIRY+ILSS+LS HISEVKASIFAAACI +LADDFAQVFL +L
Subjt:  DRTKSKQYQGVLSKARVQNHHELLTRVKVVLGGGDPEARALALILLGCWAHFAEGSAQIRYMILSSMLSSHISEVKASIFAAACISQLADDFAQVFLAIL

Query:  VNIMTSTTSLAIKMAGARVFAKLGCSHSMAKTAYKAGLELASNSSEEDFLVAMLFSLSKLASKSVFISSEQDFDLLNHRMLLLVYDVPTQVKFLCSFLSD
        VNIMT + +LAI+MAGARV  KLGCSHSMAK AYKAGLEL S+S EEDFLVAMLFSLSKLAS S+FISSE                   QV+ LCSFLS+
Subjt:  VNIMTSTTSLAIKMAGARVFAKLGCSHSMAKTAYKAGLELASNSSEEDFLVAMLFSLSKLASKSVFISSEQDFDLLNHRMLLLVYDVPTQVKFLCSFLSD

Query:  KKSARVQETSLRCLRFIFMKGECLFTNMESVVRILVDALDEPMLTTTSHCDVLRLLRKVI
        KKS RVQETSLRCL FIFMKG C FTNM   +R+LV+ALDE ML TT HCDVLRLL+K++
Subjt:  KKSARVQETSLRCLRFIFMKGECLFTNMESVVRILVDALDEPMLTTTSHCDVLRLLRKVI

A0A6J1FP76 uncharacterized protein LOC111447255

8.1e-187

94.62

Show/hide

Query:  MCDCYWFEYLHHMERNAAACAMEWSIELEKALRSKKPGRAVEAILQIGSRLQQWSREPEPNIAVYNMFDLVTWEDRLFSNTILLRLADAFKSDDKHIRVA
        MCDCYWFEYLHHMERNAAACAMEWSIELEKALRSKKPGRAVEAILQIGSRLQQWSREPEPNIAVYNMFDLVTWEDRLFSNTILLRLADAFKSDDKHIRVA
Subjt:  MCDCYWFEYLHHMERNAAACAMEWSIELEKALRSKKPGRAVEAILQIGSRLQQWSREPEPNIAVYNMFDLVTWEDRLFSNTILLRLADAFKSDDKHIRVA

Query:  VVKVFLSELNSRDRTKSKQYQGVLSKARVQNHHELLTRVKVVLGGGDPEARALALILLGCWAHFAEGSAQIRYMILSSMLSSHISEVKASIFAAACISQL
        VVKVFLSELNSRDRTKSKQYQGVLSKARVQNHHELLTRVKVVLGGGDPEARALALILLGCWAHFAEGSAQIRYMILSSMLSSHISEVKASIFAAACISQL
Subjt:  VVKVFLSELNSRDRTKSKQYQGVLSKARVQNHHELLTRVKVVLGGGDPEARALALILLGCWAHFAEGSAQIRYMILSSMLSSHISEVKASIFAAACISQL

Query:  ADDFAQVFLAILVNIMTSTTSLAIKMAGARVFAKLGCSHSMAKTAYKAGLELASNSSEEDFLVAMLFSLSKLASKSVFISSEQDFDLLNHRMLLLVYDVP
        ADDFAQVFLAILVNIMTSTTSLAIKMAGARVFAKLGCSHSMAKTAYKAGLELASNSSEEDFLVAMLFSLSKLASKSVFISSE                  
Subjt:  ADDFAQVFLAILVNIMTSTTSLAIKMAGARVFAKLGCSHSMAKTAYKAGLELASNSSEEDFLVAMLFSLSKLASKSVFISSEQDFDLLNHRMLLLVYDVP

Query:  TQVKFLCSFLSDKKSARVQETSLRCLRFIFMKGECLFTNMESVVRILVDALDEPMLTTTSHCDVLRLLRKVI
         QVKFLCSFLSDKKSARVQETSLRCLRFIFMKGECLFTNMESVVRILVDALDEPMLTTTSHCDVLRLLRK+I
Subjt:  TQVKFLCSFLSDKKSARVQETSLRCLRFIFMKGECLFTNMESVVRILVDALDEPMLTTTSHCDVLRLLRKVI

A0A6J1JBG3 uncharacterized protein LOC111485260

4.3e-172

91.67

Show/hide

Query:  MERNAAACAMEWSIELEKALRSKKPGRAVEAILQIGSRLQQWSREPEPNIAVYNMFDLVTWEDRLFSNTILLRLADAFKSDDKHIRVAVVKVFLSELNSR
        MERNAAA AMEWSIELEKALRSKKPGRAVEAILQIGSRLQQWSREPEPNIAVYNMFDLVTWEDRLFSNTILLRLADAFKSDDKHIRVAVV+VFLSELNSR
Subjt:  MERNAAACAMEWSIELEKALRSKKPGRAVEAILQIGSRLQQWSREPEPNIAVYNMFDLVTWEDRLFSNTILLRLADAFKSDDKHIRVAVVKVFLSELNSR

Query:  DRTKSKQYQGVLSKARVQNHHELLTRVKVVLGGGDPEARALALILLGCWAHFAEGSAQIRYMILSSMLSSHISEVKASIFAAACISQLADDFAQVFLAIL
        DRTKS+QYQGVLSKARVQNHHELLTRVKVVLGGGDPEARALALILLGCWAHFAEGSAQIRYMIL S+LSSHISEVKASIFAAACISQLADDFA+VFLAIL
Subjt:  DRTKSKQYQGVLSKARVQNHHELLTRVKVVLGGGDPEARALALILLGCWAHFAEGSAQIRYMILSSMLSSHISEVKASIFAAACISQLADDFAQVFLAIL

Query:  VNIMTSTTSLAIKMAGARVFAKLGCSHSMAKTAYKAGLELASNSSEEDFLVAMLFSLSKLASKSVFISSEQDFDLLNHRMLLLVYDVPTQVKFLCSFLSD
        VNIMTSTTSLA+KMAGARVFAKLGCSHSMAKTAYKAGLELAS+SSEEDFLVAMLFSLSKLASKSVFISSE                   QVK LCSFLSD
Subjt:  VNIMTSTTSLAIKMAGARVFAKLGCSHSMAKTAYKAGLELASNSSEEDFLVAMLFSLSKLASKSVFISSEQDFDLLNHRMLLLVYDVPTQVKFLCSFLSD

Query:  KKSARVQETSLRCLRFIFMKGECLFTNMESVVRILVDALDEPMLTTTSHCDVLRLLRKVI
        KKS RVQETSLRCLRFIFMKGECLFTNMESVVRILVDALDEPMLTTTSHCDVLRLLRK+I
Subjt:  KKSARVQETSLRCLRFIFMKGECLFTNMESVVRILVDALDEPMLTTTSHCDVLRLLRKVI

SwissProt top hits

e value

%identity

Alignment

Q54PL2 Integrator complex subunit 7 homolog

1.0e-05

22.44

Show/hide

Query:  IELEKALRSKKPGRAVEAILQIGSRLQQWSREPEPNIAVYNMFDLVTWEDRLFSNTILLRLADAFKSDDKHIRVAVVKVFLSELNSRDRTKSKQYQGVLS
        +E+ K +RS   G  +E+IL     ++     P P                L  N+++ RL+D F++    ++  ++KVF  E +S              
Subjt:  IELEKALRSKKPGRAVEAILQIGSRLQQWSREPEPNIAVYNMFDLVTWEDRLFSNTILLRLADAFKSDDKHIRVAVVKVFLSELNSRDRTKSKQYQGVLS

Query:  KARVQNHHELLTRVKVVLGGGDPEARALALILLGCWAHFAEGSAQIRYMILSSMLSSHISEVKASIFAAACISQLADDFAQVFLAILVNIMTSTTSLAI-
          +V N  E+L R+  V+   DP AR+L+L +LG   H       I + I + M S    E++A+IF    + +++  F+   +  +  ++ +  +  I 
Subjt:  KARVQNHHELLTRVKVVLGGGDPEARALALILLGCWAHFAEGSAQIRYMILSSMLSSHISEVKASIFAAACISQLADDFAQVFLAILVNIMTSTTSLAI-

Query:  KMAGARVFAKLGCSHSMAKTAYKAGLELASNSSEEDFLVAMLFSLSKLASKSVFISSEQDFDLLNHRMLLLVYDVPTQVKFLCSFLSDKKSARVQETSLR
        K+   R+F  +  SHS+A             +  ++ LV +L     +   SV +      D L +  L  +  +   +KFL ++        V+  +L+
Subjt:  KMAGARVFAKLGCSHSMAKTAYKAGLELASNSSEEDFLVAMLFSLSKLASKSVFISSEQDFDLLNHRMLLLVYDVPTQVKFLCSFLSDKKSARVQETSLR

Query:  CLR
        CL+
Subjt:  CLR

Arabidopsis top hits

e value

%identity

Alignment

AT4G20060.1 ARM repeat superfamily protein

4.5e-73

45.18

Show/hide

Query:  MERNAAACAMEWSIELEKALRSKKPGRAVEAILQIGSRLQQWSREPEPNIAVYNMFDLVTWEDRLFSNTILLRLADAFKSDDKHIRVAVVKVFLSELN-S
        ME+ +AACAMEWSI+LEK+LRSK   +AVEAIL+ G +L+QWS+EPE  IAVYN+F LV  ED+LFSNTILLRL DAF   DK I++AVV+VF+S    S
Subjt:  MERNAAACAMEWSIELEKALRSKKPGRAVEAILQIGSRLQQWSREPEPNIAVYNMFDLVTWEDRLFSNTILLRLADAFKSDDKHIRVAVVKVFLSELN-S

Query:  RDRTKSKQYQGVLSKARVQNHHELLTRVKVVLGGGDPEARALALILLGCWAHFAEGSAQIRYMILSSMLSSHISEVKASIFAAACISQLADDFAQVFLAI
        R +  ++     LSK RV NH ELLTRVK V   GD E++ALALIL GCW  FA   A +RY++ SSM+S H  E ++++FAAAC  ++ADDFA V L +
Subjt:  RDRTKSKQYQGVLSKARVQNHHELLTRVKVVLGGGDPEARALALILLGCWAHFAEGSAQIRYMILSSMLSSHISEVKASIFAAACISQLADDFAQVFLAI

Query:  LVNIMTSTTSLAIK--MAGARVFAKLGCSHSMAKTAYKAGLELASNSSEEDFLVAMLFSLSKLASKSVFISSEQDFDLLNHRMLLLVYDVPTQVKFLCSF
        L N M     +  K  +A  RVFAK+GCSH++A  A+K  ++L  +S +ED LV  L SL+KLAS+S  ++SE                     + +  F
Subjt:  LVNIMTSTTSLAIK--MAGARVFAKLGCSHSMAKTAYKAGLELASNSSEEDFLVAMLFSLSKLASKSVFISSEQDFDLLNHRMLLLVYDVPTQVKFLCSF

Query:  LSDKKSARVQETSLRCLRFIFMKGECLFTNMESVVRILVDALDEPMLTTTSHCDVLRLLRKVI
        L + K++  +   LRCL F+  +G C     E  +  +   L +  L++      L++ +K++
Subjt:  LSDKKSARVQETSLRCLRFIFMKGECLFTNMESVVRILVDALDEPMLTTTSHCDVLRLLRKVI

Sequences

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CDS sequence

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ATGTGTGACTGCTATTGGTTTGAGTATCTGCATCACATGGAGAGAAATGCTGCAGCTTGTGCTATGGAATGGAGTATTGAGCTGGAGAAGGCTCTTCGTTCAAAGAAACC
AGGTCGGGCTGTTGAAGCTATACTTCAGATTGGATCTCGACTTCAGCAATGGAGTAGAGAGCCAGAGCCAAATATAGCAGTATATAATATGTTTGACCTTGTTACTTGGG
AGGATAGGCTATTTTCCAACACTATTCTCCTACGGCTTGCCGATGCGTTTAAGTCTGATGACAAACATATTAGAGTTGCAGTTGTTAAGGTATTCTTATCCGAGCTCAAT
AGCCGTGACAGGACAAAAAGTAAACAATACCAAGGGGTTCTTTCAAAGGCCAGAGTGCAAAACCACCATGAATTACTGACTCGAGTAAAGGTTGTTCTTGGTGGAGGGGA
TCCTGAGGCTAGGGCTCTAGCTTTGATTCTATTAGGATGTTGGGCACATTTTGCAGAAGGCAGTGCCCAGATACGTTATATGATACTTTCTAGCATGCTATCTTCTCATA
TTTCGGAGGTTAAAGCATCTATATTTGCTGCAGCATGCATTAGTCAGTTAGCAGATGACTTTGCGCAAGTCTTCTTAGCGATTTTGGTTAATATAATGACTTCTACTACA
TCCTTGGCCATCAAAATGGCTGGAGCTCGAGTGTTCGCGAAATTGGGATGCTCACATTCAATGGCCAAAACGGCTTACAAGGCTGGACTCGAGCTCGCCTCAAACTCTAG
TGAAGAGGATTTTTTGGTTGCAATGTTATTTTCTCTATCCAAACTGGCTTCGAAGTCAGTATTTATTAGTTCTGAGCAGGATTTTGATCTTCTTAATCATAGAATGTTAT
TACTTGTTTACGATGTCCCAACGCAGGTGAAATTTCTTTGCTCGTTTCTTAGCGACAAAAAGTCTGCGCGTGTGCAAGAAACATCTTTAAGATGTTTGCGTTTTATTTTC
ATGAAAGGAGAATGCCTGTTTACTAATATGGAATCTGTGGTCAGAATTTTAGTTGATGCACTGGATGAACCCATGCTAACGACTACGTCACATTGTGACGTTCTACGGCT
GTTGCGAAAGGTCATTCCTGAGCTTAAATGGATGAACTCATGTTTAAGTTTTGATCTTGAAATATGTTGA

mRNA sequence

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CCGTGGTGTCGCCGCCGGCCGGGAGTGCCTCCGCGTTACAACAAGTTCAACAATCATTGTTTGGTAAGGCTCGAAGTTTGAAGATTTGGGTACCGAATTTAGCGTTTTTT
TTTTTATTCGCTGGGACTATTTGGTGATGCTTTCGTAAAGGGGTCTGGGGCGTTCGAGTGCATGTGTGACTGCTATTGGTTTGAGTATCTGCATCACATGGAGAGAAATG
CTGCAGCTTGTGCTATGGAATGGAGTATTGAGCTGGAGAAGGCTCTTCGTTCAAAGAAACCAGGTCGGGCTGTTGAAGCTATACTTCAGATTGGATCTCGACTTCAGCAA
TGGAGTAGAGAGCCAGAGCCAAATATAGCAGTATATAATATGTTTGACCTTGTTACTTGGGAGGATAGGCTATTTTCCAACACTATTCTCCTACGGCTTGCCGATGCGTT
TAAGTCTGATGACAAACATATTAGAGTTGCAGTTGTTAAGGTATTCTTATCCGAGCTCAATAGCCGTGACAGGACAAAAAGTAAACAATACCAAGGGGTTCTTTCAAAGG
CCAGAGTGCAAAACCACCATGAATTACTGACTCGAGTAAAGGTTGTTCTTGGTGGAGGGGATCCTGAGGCTAGGGCTCTAGCTTTGATTCTATTAGGATGTTGGGCACAT
TTTGCAGAAGGCAGTGCCCAGATACGTTATATGATACTTTCTAGCATGCTATCTTCTCATATTTCGGAGGTTAAAGCATCTATATTTGCTGCAGCATGCATTAGTCAGTT
AGCAGATGACTTTGCGCAAGTCTTCTTAGCGATTTTGGTTAATATAATGACTTCTACTACATCCTTGGCCATCAAAATGGCTGGAGCTCGAGTGTTCGCGAAATTGGGAT
GCTCACATTCAATGGCCAAAACGGCTTACAAGGCTGGACTCGAGCTCGCCTCAAACTCTAGTGAAGAGGATTTTTTGGTTGCAATGTTATTTTCTCTATCCAAACTGGCT
TCGAAGTCAGTATTTATTAGTTCTGAGCAGGATTTTGATCTTCTTAATCATAGAATGTTATTACTTGTTTACGATGTCCCAACGCAGGTGAAATTTCTTTGCTCGTTTCT
TAGCGACAAAAAGTCTGCGCGTGTGCAAGAAACATCTTTAAGATGTTTGCGTTTTATTTTCATGAAAGGAGAATGCCTGTTTACTAATATGGAATCTGTGGTCAGAATTT
TAGTTGATGCACTGGATGAACCCATGCTAACGACTACGTCACATTGTGACGTTCTACGGCTGTTGCGAAAGGTCATTCCTGAGCTTAAATGGATGAACTCATGTTTAAGT
TTTGATCTTGAAATATGTTGA

Protein sequence

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MCDCYWFEYLHHMERNAAACAMEWSIELEKALRSKKPGRAVEAILQIGSRLQQWSREPEPNIAVYNMFDLVTWEDRLFSNTILLRLADAFKSDDKHIRVAVVKVFLSELN
SRDRTKSKQYQGVLSKARVQNHHELLTRVKVVLGGGDPEARALALILLGCWAHFAEGSAQIRYMILSSMLSSHISEVKASIFAAACISQLADDFAQVFLAILVNIMTSTT
SLAIKMAGARVFAKLGCSHSMAKTAYKAGLELASNSSEEDFLVAMLFSLSKLASKSVFISSEQDFDLLNHRMLLLVYDVPTQVKFLCSFLSDKKSARVQETSLRCLRFIF
MKGECLFTNMESVVRILVDALDEPMLTTTSHCDVLRLLRKVIPELKWMNSCLSFDLEIC

CmoCh04G011000 (gene) of Cucurbita moschata (Rifu) v1 genome