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CmoCh04G011230 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G011230
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionubiquinol-cytochrome c reductase complex 6.7 kDa protein
Genome locationCmo_Chr04:5736860..5737208
RNA-Seq ExpressionCmoCh04G011230
SyntenyCmoCh04G011230
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067023.1 hypothetical protein E6C27_scaffold38G00590 [Cucumis melo var. makuwa]1.9e-1549.52Show/hide
Query:  MMTGEKGLLKFFSPKLRNRLHPINIEAAVLWSVAGTATALWLV-------------------------------------QPFDWLKKKIWEVEEKAEDK
        M TGEKGLLKF  PKLRN LHPINIEA  LWSVAGTATA  L                                      QPFDWLKKK+W+VEEK E++
Subjt:  MMTGEKGLLKFFSPKLRNRLHPINIEAAVLWSVAGTATALWLV-------------------------------------QPFDWLKKKIWEVEEKAEDK

Query:  VQSDE
        VQ++E
Subjt:  VQSDE
KAG6600869.1 hypothetical protein SDJN03_06102, partial [Cucurbita argyrosperma subsp. sororia]2.1e-30100Show/hide
Query:  MMTGEKGLLKFFSPKLRNRLHPINIEAAVLWSVAGTATALWLVQPFDWLKKKIWEVEEKAEDKVQSDE
        MMTGEKGLLKFFSPKLRNRLHPINIEAAVLWSVAGTATALWLVQPFDWLKKKIWEVEEKAEDKVQSDE
Subjt:  MMTGEKGLLKFFSPKLRNRLHPINIEAAVLWSVAGTATALWLVQPFDWLKKKIWEVEEKAEDKVQSDE
KAG7031504.1 hypothetical protein SDJN02_05544, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-39100Show/hide
Query:  MAPFELSKRYRNIKEMMTGEKGLLKFFSPKLRNRLHPINIEAAVLWSVAGTATALWLVQPFDWLKKKIWEVEEKAEDKVQSDE
        MAPFELSKRYRNIKEMMTGEKGLLKFFSPKLRNRLHPINIEAAVLWSVAGTATALWLVQPFDWLKKKIWEVEEKAEDKVQSDE
Subjt:  MAPFELSKRYRNIKEMMTGEKGLLKFFSPKLRNRLHPINIEAAVLWSVAGTATALWLVQPFDWLKKKIWEVEEKAEDKVQSDE
KGN50751.1 hypothetical protein Csa_005826 [Cucumis sativus]1.2e-2280.88Show/hide
Query:  MMTGEKGLLKFFSPKLRNRLHPINIEAAVLWSVAGTATALWLVQPFDWLKKKIWEVEEKAEDKVQSDE
        M TGEKGLLKF  PKLRN LHPINIEAA LWSVAG ATALWLVQPFDWLKKK+W VEEK E  VQ++E
Subjt:  MMTGEKGLLKFFSPKLRNRLHPINIEAAVLWSVAGTATALWLVQPFDWLKKKIWEVEEKAEDKVQSDE
XP_022988689.1 ubiquinol-cytochrome c reductase complex 6.7 kDa protein [Cucurbita maxima]1.8e-3796.39Show/hide
Query:  MAPFELSKRYRNIKEMMTGEKGLLKFFSPKLRNRLHPINIEAAVLWSVAGTATALWLVQPFDWLKKKIWEVEEKAEDKVQSDE
        MAPFELSKRYRNIKEMMTGEKGLLKF SPKLRNRLHPINIEAAVLWSVAGTATALWLVQPFDWLKKKIW VEEK EDKVQSDE
Subjt:  MAPFELSKRYRNIKEMMTGEKGLLKFFSPKLRNRLHPINIEAAVLWSVAGTATALWLVQPFDWLKKKIWEVEEKAEDKVQSDE
TrEMBL top hitse value%identityAlignment
A0A0A0KSL8 Uncharacterized protein6.0e-2380.88Show/hide
Query:  MMTGEKGLLKFFSPKLRNRLHPINIEAAVLWSVAGTATALWLVQPFDWLKKKIWEVEEKAEDKVQSDE
        M TGEKGLLKF  PKLRN LHPINIEAA LWSVAG ATALWLVQPFDWLKKK+W VEEK E  VQ++E
Subjt:  MMTGEKGLLKFFSPKLRNRLHPINIEAAVLWSVAGTATALWLVQPFDWLKKKIWEVEEKAEDKVQSDE
A0A5A7VG06 Uncharacterized protein9.3e-1649.52Show/hide
Query:  MMTGEKGLLKFFSPKLRNRLHPINIEAAVLWSVAGTATALWLV-------------------------------------QPFDWLKKKIWEVEEKAEDK
        M TGEKGLLKF  PKLRN LHPINIEA  LWSVAGTATA  L                                      QPFDWLKKK+W+VEEK E++
Subjt:  MMTGEKGLLKFFSPKLRNRLHPINIEAAVLWSVAGTATALWLV-------------------------------------QPFDWLKKKIWEVEEKAEDK

Query:  VQSDE
        VQ++E
Subjt:  VQSDE
A0A6J1JMA0 ubiquinol-cytochrome c reductase complex 6.7 kDa protein8.7e-3896.39Show/hide
Query:  MAPFELSKRYRNIKEMMTGEKGLLKFFSPKLRNRLHPINIEAAVLWSVAGTATALWLVQPFDWLKKKIWEVEEKAEDKVQSDE
        MAPFELSKRYRNIKEMMTGEKGLLKF SPKLRNRLHPINIEAAVLWSVAGTATALWLVQPFDWLKKKIW VEEK EDKVQSDE
Subjt:  MAPFELSKRYRNIKEMMTGEKGLLKFFSPKLRNRLHPINIEAAVLWSVAGTATALWLVQPFDWLKKKIWEVEEKAEDKVQSDE
A0A7J8SZ03 Uncharacterized protein2.9e-0955Show/hide
Query:  MTGEKGLLKFFSPKLRNRLHPINIEAAVLWSVAGTATALWLVQPFDWLKKKIWEVEEKAE
        M GE  + KF  P+LR +  PI+I+AA  W VA T TALWL+QPFDWLKK   E  +K+E
Subjt:  MTGEKGLLKFFSPKLRNRLHPINIEAAVLWSVAGTATALWLVQPFDWLKKKIWEVEEKAE
A0A7J9FBL1 Uncharacterized protein2.9e-0955Show/hide
Query:  MTGEKGLLKFFSPKLRNRLHPINIEAAVLWSVAGTATALWLVQPFDWLKKKIWEVEEKAE
        M GE  + KF  P+LR +  PI+I+AA  W VA T TALWL+QPFDWLKK   E  +K+E
Subjt:  MTGEKGLLKFFSPKLRNRLHPINIEAAVLWSVAGTATALWLVQPFDWLKKKIWEVEEKAE
SwissProt top hitse value%identityAlignment
P48505 Ubiquinol-cytochrome c reductase complex 6.7 kDa protein4.2e-0545.28Show/hide
Query:  GLLKFFSPKLRNRLHPINIEAAVLWSVAGTATALWLVQPFDWLKKKIWEVEEK
        GL KF  PKLR +    +I+AA  W VA    ALW++QP+D+L+K   E +E+
Subjt:  GLLKFFSPKLRNRLHPINIEAAVLWSVAGTATALWLVQPFDWLKKKIWEVEEK
Q94K78 Cytochrome b-c1 complex subunit 10, mitochondrial8.4e-0646Show/hide
Query:  MTGEKGLLKFFSPKLRNRLHPINIEAAVLWSVAGTATALWLVQPFDWLKK
        M G  GLL    PK++     I+I+AA  W +A  A A+W+VQPF W+KK
Subjt:  MTGEKGLLKFFSPKLRNRLHPINIEAAVLWSVAGTATALWLVQPFDWLKK
Arabidopsis top hitse value%identityAlignment
AT2G40765.1 unknown protein6.0e-0746Show/hide
Query:  MTGEKGLLKFFSPKLRNRLHPINIEAAVLWSVAGTATALWLVQPFDWLKK
        M G  GLL    PK++     I+I+AA  W +A  A A+W+VQPF W+KK
Subjt:  MTGEKGLLKFFSPKLRNRLHPINIEAAVLWSVAGTATALWLVQPFDWLKK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCTTTTGAGCTAAGTAAGAGATACAGAAACATAAAAGAAATGATGACAGGTGAGAAGGGTTTGTTGAAGTTCTTCAGCCCAAAGCTCCGGAACCGCCTGCATCC
CATCAACATCGAAGCTGCTGTGCTATGGAGTGTTGCAGGCACAGCCACTGCCCTTTGGCTTGTACAGCCATTTGACTGGTTGAAGAAGAAGATTTGGGAGGTGGAGGAAA
AAGCAGAAGACAAGGTGCAAAGTGATGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCCTTTTGAGCTAAGTAAGAGATACAGAAACATAAAAGAAATGATGACAGGTGAGAAGGGTTTGTTGAAGTTCTTCAGCCCAAAGCTCCGGAACCGCCTGCATCC
CATCAACATCGAAGCTGCTGTGCTATGGAGTGTTGCAGGCACAGCCACTGCCCTTTGGCTTGTACAGCCATTTGACTGGTTGAAGAAGAAGATTTGGGAGGTGGAGGAAA
AAGCAGAAGACAAGGTGCAAAGTGATGAATAA
Protein sequenceShow/hide protein sequence
MAPFELSKRYRNIKEMMTGEKGLLKFFSPKLRNRLHPINIEAAVLWSVAGTATALWLVQPFDWLKKKIWEVEEKAEDKVQSDE