CuGenDBv2

Gene ID	CmoCh04G011290
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Chalcone-flavonone isomerase family protein
Genome location	Cmo_Chr04:5767999..5770652
RNA-Seq Expression	CmoCh04G011290
Synteny	CmoCh04G011290
Gene Ontology terms	GO:0009813 - flavonoid biosynthetic process (biological process) GO:0016872 - intramolecular lyase activity (molecular function)
InterPro domains	IPR016087 - Chalcone isomerase IPR016088 - Chalcone isomerase, 3-layer sandwich IPR016089 - Chalcone isomerase, orthogonal bundle domain superfamily IPR036298 - Chalcone isomerase superfamily IPR044191 - Chalcone--flavonone isomerase 3-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6600877.1 putative chalcone--flavonone isomerase 3, partial [Cucurbita argyrosperma subsp. sororia]

1.2e-59

96.21

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Query:  MVTAPVEKAIRVVVIKEIKGAQYGLQLENAVRDRLAADDKYEEEEEAQLEKVVEFFRSKYLSSHSVISFHFPSAPTIAEIEFLSDEKEGSKMKVENGNVV
        +V+APVEKAIRVVVIKEIKGAQYGLQLENAVRDRLAA+DKYEEEEEAQLEKVVEFFRSKYLSSHSVISFHFPSAPTIAEIEF S+EKEGSKMKVENGNVV
Subjt:  MVTAPVEKAIRVVVIKEIKGAQYGLQLENAVRDRLAADDKYEEEEEAQLEKVVEFFRSKYLSSHSVISFHFPSAPTIAEIEFLSDEKEGSKMKVENGNVV

Query:  EMIKKWYLGGTRGASQTTISSLAKNLAIELSK
        EMIKKWYLGGTRGASQTTISSLAKNLAIELSK
Subjt:  EMIKKWYLGGTRGASQTTISSLAKNLAIELSK

KAG7031511.1 putative chalcone--flavonone isomerase 3 [Cucurbita argyrosperma subsp. argyrosperma]

3.1e-60

96.97

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Query:  MVTAPVEKAIRVVVIKEIKGAQYGLQLENAVRDRLAADDKYEEEEEAQLEKVVEFFRSKYLSSHSVISFHFPSAPTIAEIEFLSDEKEGSKMKVENGNVV
        +V+APVEKAIRVVVIKEIKGAQYGLQLENAVRDRLAADDKYEEEEEAQLEKVVEFFRSKYLSSHSVISFHFPSAPTIAEIEF S+EKEGSKMKVENGNVV
Subjt:  MVTAPVEKAIRVVVIKEIKGAQYGLQLENAVRDRLAADDKYEEEEEAQLEKVVEFFRSKYLSSHSVISFHFPSAPTIAEIEFLSDEKEGSKMKVENGNVV

Query:  EMIKKWYLGGTRGASQTTISSLAKNLAIELSK
        EMIKKWYLGGTRGASQTTISSLAKNLAIELSK
Subjt:  EMIKKWYLGGTRGASQTTISSLAKNLAIELSK

XP_022943122.1 probable chalcone--flavonone isomerase 3 [Cucurbita moschata]

1.7e-61

98.48

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Query:  MVTAPVEKAIRVVVIKEIKGAQYGLQLENAVRDRLAADDKYEEEEEAQLEKVVEFFRSKYLSSHSVISFHFPSAPTIAEIEFLSDEKEGSKMKVENGNVV
        +V+APVEKAIRVVVIKEIKGAQYGLQLENAVRDRLAADDKYEEEEEAQLEKVVEFFRSKYLSSHSVISFHFPSAPTIAEIEFLSDEKEGSKMKVENGNVV
Subjt:  MVTAPVEKAIRVVVIKEIKGAQYGLQLENAVRDRLAADDKYEEEEEAQLEKVVEFFRSKYLSSHSVISFHFPSAPTIAEIEFLSDEKEGSKMKVENGNVV

Query:  EMIKKWYLGGTRGASQTTISSLAKNLAIELSK
        EMIKKWYLGGTRGASQTTISSLAKNLAIELSK
Subjt:  EMIKKWYLGGTRGASQTTISSLAKNLAIELSK

XP_022992837.1 probable chalcone--flavonone isomerase 3 [Cucurbita maxima]

7.2e-57

90.91

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Query:  MVTAPVEKAIRVVVIKEIKGAQYGLQLENAVRDRLAADDKYEEEEEAQLEKVVEFFRSKYLSSHSVISFHFPSAPTIAEIEFLSDEKEGSKMKVENGNVV
        +V+APVEKA+RV VIKEIKGAQY LQLENAVRDRLAADDKYEEEEEAQLEK+VEFFRSKYLS+HSVISFHFPSAPTIAEIEF SD KEGSKMKVENGNVV
Subjt:  MVTAPVEKAIRVVVIKEIKGAQYGLQLENAVRDRLAADDKYEEEEEAQLEKVVEFFRSKYLSSHSVISFHFPSAPTIAEIEFLSDEKEGSKMKVENGNVV

Query:  EMIKKWYLGGTRGASQTTISSLAKNLAIELSK
        EMIKKWYLGGTRG SQTTISSLA NLAI+LSK
Subjt:  EMIKKWYLGGTRGASQTTISSLAKNLAIELSK

XP_023527694.1 probable chalcone--flavonone isomerase 3 [Cucurbita pepo subsp. pepo]

1.5e-57

93.94

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Query:  MVTAPVEKAIRVVVIKEIKGAQYGLQLENAVRDRLAADDKYEEEEEAQLEKVVEFFRSKYLSSHSVISFHFPSAPTIAEIEFLSDEKEGSKMKVENGNVV
        +V+APVEKAIRVVVIKEIKGAQYGLQLENAVRDRLAADDKYEEEEEAQLEKVVEFFRSKYLS+HSVISFHFPSAPTIAEIEF S  KEGSKMKVENGNVV
Subjt:  MVTAPVEKAIRVVVIKEIKGAQYGLQLENAVRDRLAADDKYEEEEEAQLEKVVEFFRSKYLSSHSVISFHFPSAPTIAEIEFLSDEKEGSKMKVENGNVV

Query:  EMIKKWYLGGTRGASQTTISSLAKNLAIELSK
        EMIKKWYLGGTRG SQTTISSLA NLAIELSK
Subjt:  EMIKKWYLGGTRGASQTTISSLAKNLAIELSK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KPA3 Chalcone-flavonone isomerase family protein

5.2e-53

84.85

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Query:  MVTAPVEKAIRVVVIKEIKGAQYGLQLENAVRDRLAADDKYEEEEEAQLEKVVEFFRSKYLSSHSVISFHFPSAPTIAEIEFLSDEKEGSKMKVENGNVV
        +++APVEK IRVVVIKEIKG+QYG+QLE+AVRDRLAADDKYE+EEEAQLEK+VEFF+SKYL +HSVI+FHFP A TIAEIEF SDEKE SKMKVENGNVV
Subjt:  MVTAPVEKAIRVVVIKEIKGAQYGLQLENAVRDRLAADDKYEEEEEAQLEKVVEFFRSKYLSSHSVISFHFPSAPTIAEIEFLSDEKEGSKMKVENGNVV

Query:  EMIKKWYLGGTRGASQTTISSLAKNLAIELSK
        EMIKKWYLGGTRG SQ TISSLA NLAIELSK
Subjt:  EMIKKWYLGGTRGASQTTISSLAKNLAIELSK

A0A1S3C525 Chalcone-flavonone isomerase family protein

8.9e-53

84.85

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Query:  MVTAPVEKAIRVVVIKEIKGAQYGLQLENAVRDRLAADDKYEEEEEAQLEKVVEFFRSKYLSSHSVISFHFPSAPTIAEIEFLSDEKEGSKMKVENGNVV
        +V+APVEK IRVVVIKEIKG+QYG+QLE+AVRDRLAADDKYE+EEEAQLEK+VEFF+SKYL +HSVI+FHFP A TIA+IEF SDEKE SKMKVENGNVV
Subjt:  MVTAPVEKAIRVVVIKEIKGAQYGLQLENAVRDRLAADDKYEEEEEAQLEKVVEFFRSKYLSSHSVISFHFPSAPTIAEIEFLSDEKEGSKMKVENGNVV

Query:  EMIKKWYLGGTRGASQTTISSLAKNLAIELSK
        EMIKKWYLGGTRG SQ TISSLA NLAIELSK
Subjt:  EMIKKWYLGGTRGASQTTISSLAKNLAIELSK

A0A5D3BCV3 Chalcone-flavonone isomerase family protein

8.9e-53

84.85

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Query:  MVTAPVEKAIRVVVIKEIKGAQYGLQLENAVRDRLAADDKYEEEEEAQLEKVVEFFRSKYLSSHSVISFHFPSAPTIAEIEFLSDEKEGSKMKVENGNVV
        +V+APVEK IRVVVIKEIKG+QYG+QLE+AVRDRLAADDKYE+EEEAQLEK+VEFF+SKYL +HSVI+FHFP A TIA+IEF SDEKE SKMKVENGNVV
Subjt:  MVTAPVEKAIRVVVIKEIKGAQYGLQLENAVRDRLAADDKYEEEEEAQLEKVVEFFRSKYLSSHSVISFHFPSAPTIAEIEFLSDEKEGSKMKVENGNVV

Query:  EMIKKWYLGGTRGASQTTISSLAKNLAIELSK
        EMIKKWYLGGTRG SQ TISSLA NLAIELSK
Subjt:  EMIKKWYLGGTRGASQTTISSLAKNLAIELSK

A0A6J1FS51 Chalcone-flavonone isomerase family protein

8.0e-62

98.48

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Query:  MVTAPVEKAIRVVVIKEIKGAQYGLQLENAVRDRLAADDKYEEEEEAQLEKVVEFFRSKYLSSHSVISFHFPSAPTIAEIEFLSDEKEGSKMKVENGNVV
        +V+APVEKAIRVVVIKEIKGAQYGLQLENAVRDRLAADDKYEEEEEAQLEKVVEFFRSKYLSSHSVISFHFPSAPTIAEIEFLSDEKEGSKMKVENGNVV
Subjt:  MVTAPVEKAIRVVVIKEIKGAQYGLQLENAVRDRLAADDKYEEEEEAQLEKVVEFFRSKYLSSHSVISFHFPSAPTIAEIEFLSDEKEGSKMKVENGNVV

Query:  EMIKKWYLGGTRGASQTTISSLAKNLAIELSK
        EMIKKWYLGGTRGASQTTISSLAKNLAIELSK
Subjt:  EMIKKWYLGGTRGASQTTISSLAKNLAIELSK

A0A6J1JR17 Chalcone-flavonone isomerase family protein

3.5e-57

90.91

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Query:  MVTAPVEKAIRVVVIKEIKGAQYGLQLENAVRDRLAADDKYEEEEEAQLEKVVEFFRSKYLSSHSVISFHFPSAPTIAEIEFLSDEKEGSKMKVENGNVV
        +V+APVEKA+RV VIKEIKGAQY LQLENAVRDRLAADDKYEEEEEAQLEK+VEFFRSKYLS+HSVISFHFPSAPTIAEIEF SD KEGSKMKVENGNVV
Subjt:  MVTAPVEKAIRVVVIKEIKGAQYGLQLENAVRDRLAADDKYEEEEEAQLEKVVEFFRSKYLSSHSVISFHFPSAPTIAEIEFLSDEKEGSKMKVENGNVV

Query:  EMIKKWYLGGTRGASQTTISSLAKNLAIELSK
        EMIKKWYLGGTRG SQTTISSLA NLAI+LSK
Subjt:  EMIKKWYLGGTRGASQTTISSLAKNLAIELSK

SwissProt top hits

e value

%identity

Alignment

A0A2U7XUE3 Chalcone isomerase-like protein 2

2.0e-41

65.91

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Query:  MVTAPVEKAIRVVVIKEIKGAQYGLQLENAVRDRLAADDKYEEEEEAQLEKVVEFFRSKYLSSHSVISFHFPSAPTIAEIEFLSDEKEGSKMKVENGNVV
        +++APVEK +R+VVIKEIKG+QYG+QLE++VRDRLAA+D YEEEEEA LEK+VEF +SKY    ++I+FHFP+    AEI    + KE SK+KVEN NVV
Subjt:  MVTAPVEKAIRVVVIKEIKGAQYGLQLENAVRDRLAADDKYEEEEEAQLEKVVEFFRSKYLSSHSVISFHFPSAPTIAEIEFLSDEKEGSKMKVENGNVV

Query:  EMIKKWYLGGTRGASQTTISSLAKNLAIELSK
        +MIKKWYLGGT G S +TISSLA NL+ ELSK
Subjt:  EMIKKWYLGGTRGASQTTISSLAKNLAIELSK

Q8VZW3 Probable chalcone--flavanone isomerase 3

5.6e-36

59.54

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Query:  MVTAPVEKAIRVVVIKEIKGAQYGLQLENAVRDRLAADDKYEEEEEAQLEKVVEFFRSKYLSSHSVISFHFPSAPTIAEIEFLSDEKEGSKMKVENGNVV
        + +A +EK IRVVVIKEIKGAQYG+QLEN VRDRLA +DKYEEEEE +LEKVV FF+SKY  ++SVI++HF +   I EI F ++ KE  K+KVEN NVV
Subjt:  MVTAPVEKAIRVVVIKEIKGAQYGLQLENAVRDRLAADDKYEEEEEAQLEKVVEFFRSKYLSSHSVISFHFPSAPTIAEIEFLSDEKEGSKMKVENGNVV

Query:  EMIKKWYLGGTRGASQTTISSLAKNLAIELS
         M+++WYL G+RG S +TI S+A +++  L+
Subjt:  EMIKKWYLGGTRGASQTTISSLAKNLAIELS

Arabidopsis top hits

e value

%identity

Alignment

AT5G05270.1 Chalcone-flavanone isomerase family protein

4.0e-37

59.54

Show/hide

Query:  MVTAPVEKAIRVVVIKEIKGAQYGLQLENAVRDRLAADDKYEEEEEAQLEKVVEFFRSKYLSSHSVISFHFPSAPTIAEIEFLSDEKEGSKMKVENGNVV
        + +A +EK IRVVVIKEIKGAQYG+QLEN VRDRLA +DKYEEEEE +LEKVV FF+SKY  ++SVI++HF +   I EI F ++ KE  K+KVEN NVV
Subjt:  MVTAPVEKAIRVVVIKEIKGAQYGLQLENAVRDRLAADDKYEEEEEAQLEKVVEFFRSKYLSSHSVISFHFPSAPTIAEIEFLSDEKEGSKMKVENGNVV

Query:  EMIKKWYLGGTRGASQTTISSLAKNLAIELS
         M+++WYL G+RG S +TI S+A +++  L+
Subjt:  EMIKKWYLGGTRGASQTTISSLAKNLAIELS

AT5G05270.2 Chalcone-flavanone isomerase family protein

4.0e-37

59.54

Show/hide

Query:  MVTAPVEKAIRVVVIKEIKGAQYGLQLENAVRDRLAADDKYEEEEEAQLEKVVEFFRSKYLSSHSVISFHFPSAPTIAEIEFLSDEKEGSKMKVENGNVV
        + +A +EK IRVVVIKEIKGAQYG+QLEN VRDRLA +DKYEEEEE +LEKVV FF+SKY  ++SVI++HF +   I EI F ++ KE  K+KVEN NVV
Subjt:  MVTAPVEKAIRVVVIKEIKGAQYGLQLENAVRDRLAADDKYEEEEEAQLEKVVEFFRSKYLSSHSVISFHFPSAPTIAEIEFLSDEKEGSKMKVENGNVV

Query:  EMIKKWYLGGTRGASQTTISSLAKNLAIELS
         M+++WYL G+RG S +TI S+A +++  L+
Subjt:  EMIKKWYLGGTRGASQTTISSLAKNLAIELS

Sequences

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CDS sequence

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ATGGTTACAGCTCCAGTGGAGAAGGCTATAAGAGTTGTGGTGATCAAAGAGATCAAAGGGGCACAATATGGGTTGCAGTTGGAGAATGCAGTTAGGGATAGATTGGCTGC
CGATGACAAATACGAGGAAGAAGAAGAAGCTCAGCTGGAAAAAGTTGTTGAATTCTTTCGGTCCAAATACTTGAGCTCCCATTCTGTTATAAGTTTCCATTTCCCATCAG
CTCCGACCATAGCTGAGATTGAGTTTTTGAGCGATGAGAAAGAGGGGTCGAAGATGAAAGTAGAGAATGGGAATGTGGTTGAGATGATTAAGAAATGGTACCTGGGAGGG
ACTAGAGGTGCGTCTCAAACAACCATATCTTCATTGGCTAAGAATCTTGCCATTGAGTTATCTAAATGA

mRNA sequence

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CGCCAGACCAAACAAGTCGCGGCCCGTGTCCTTTCTGCGCTACCTACTCTGCTCTGCCTCGGCATAGACATCGACATCGACATCGACGGAGTCCTATTTATAGCGTCTAA
TTCCAACTCCATGATCTCACATCCTTCACCGTCAAGCCTATTACCGCTCTGCCGCTGAAGAACTAACTTCCTTTCGTTTCTTCATCTGTTTTCCTTTCCCATCACGATCG
CGATCATGGGGAGTGAAGTGGAAGTGGTAGCGGACATTGCTTTCCCTAACCAGATCGTTAAGAACAAGCCGTTGTCTCTGTTGGGTCATGGAATTATCGACCTCGAGATT
CACTTTCTACAAATAAAATTCACGGCCATTGGAGTTTATCTGGAGCCTGCGATTGTGGAGCATTTGAAGCAATGGAAGGGAAACGCAGCTGAGGACTTGCTGAAAGATGA
TGACTTCTTTGAGGCCATTGTTTCTGGTATCTCCCTAATTTTCCTATTTAACTATATACACCAATTATAATACTAAAAGTAATGCAAAAAAAAACGAGTATAATTTAGCT
AGTTGGTCGAGCAATAGTTTTTGGTATAATAAAATGGACAAGTTGATCTATGCAAGTAGTCGAGAATGTTAGATGAACACGACTCTCCATAATGGTATGATATGCTCCAC
TTTGAGCATAAGCTTTCGTTGCTCCCAAAAGATCTCACACTAGTTGAGAGAGTGAGTATTCCTTGATTATAACCCATGATCATTCTCTAAATTAGCCAACGTGGACTTTC
ATCCAACACCTCCTCTCGAACAAAGTACGTCTCTTTTTTTTTTGGAGTCTTAGTCATTTTTTACTATACCTTCCAGGGGCCTCGACTTTTGGAGTCATTTGTTCGACGTT
TGGGGATTCTATTGACATGGCTAATTTAGGGCATGGCTCTGATACCATGTTATATGAACACGACTCTCCACAATAGTATGATATAGTCCACTTTGAGCATAAACTCTCGT
GGCTTTGTTTTGGGTTTCTCCAAAAGGCCTCACATCGATGGAGAGAGTATTCTTTGATTATAAATCCATGATCATTCCCTAAATTAGCTAATGTGAGACTTTCATCAAAT
AGGGAAGTTGTTTGATGAGTGTTTTTGTTTTCAAAACTTCTCATGATTGTCGTGAGCGTTGAAATCTGGATGAGTTGATCTATGTAAAGATTCGAAAAGTTGTATGGTGC
GTGTTCTTGTTTTTGAAATATCTCATAAAAGTTAAAAGGATATTTTGAAAGCAGATTCCAAACAAGATGTTGTGTTTTATGTTCTTGATTTGCTTTCTTATGTTCATATA
CTCCTCTTTATTTTCGACTCGTAACATGAATCGGGAAACCTAAACCTTAAACGCTCGAGTGAATTTGAATGGTTACAGCTCCAGTGGAGAAGGCTATAAGAGTTGTGGTG
ATCAAAGAGATCAAAGGGGCACAATATGGGTTGCAGTTGGAGAATGCAGTTAGGGATAGATTGGCTGCCGATGACAAATACGAGGAAGAAGAAGAAGCTCAGCTGGAAAA
AGTTGTTGAATTCTTTCGGTCCAAATACTTGAGCTCCCATTCTGTTATAAGTTTCCATTTCCCATCAGCTCCGACCATAGCTGAGATTGAGTTTTTGAGCGATGAGAAAG
AGGGGTCGAAGATGAAAGTAGAGAATGGGAATGTGGTTGAGATGATTAAGAAATGGTACCTGGGAGGGACTAGAGGTGCGTCTCAAACAACCATATCTTCATTGGCTAAG
AATCTTGCCATTGAGTTATCTAAATGA

Protein sequence

Show/hide protein sequence

MVTAPVEKAIRVVVIKEIKGAQYGLQLENAVRDRLAADDKYEEEEEAQLEKVVEFFRSKYLSSHSVISFHFPSAPTIAEIEFLSDEKEGSKMKVENGNVVEMIKKWYLGG
TRGASQTTISSLAKNLAIELSK

CmoCh04G011290 (gene) of Cucurbita moschata (Rifu) v1 genome