; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G011340 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G011340
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description40S ribosomal protein S26
Genome locationCmo_Chr04:5780497..5787220
RNA-Seq ExpressionCmoCh04G011340
SyntenyCmoCh04G011340
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0019430 - removal of superoxide radicals (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0004784 - superoxide dismutase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR000892 - Ribosomal protein S26e
IPR002589 - Macro domain
IPR038551 - Ribosomal protein S26e superfamily
IPR043472 - Macro domain-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAF1870209.1 unnamed protein product [Brassica napus]9.9e-8555.76Show/hide
Query:  SGVVRFKVSPSTACVIQKGDITKWFIDGSSDAIVEMGRCCRNCFPIAMLRDLEVNPANEVMLGGGGADGAIHNAAGPDLVQACYSVQEVQPGIRCPTGEA
        SG V F +S S+   I KGDITKW +D SSDAI                    VNPANE MLGGGGADGAIH AAGP L  ACY V EV+PG+RCP GEA
Subjt:  SGVVRFKVSPSTACVIQKGDITKWFIDGSSDAIVEMGRCCRNCFPIAMLRDLEVNPANEVMLGGGGADGAIHNAAGPDLVQACYSVQEVQPGIRCPTGEA

Query:  RITP---------------------------------------------------------YPFDEAATIALSTVKEFSNGL------------------
        RITP                                                         YPFDEAA + +ST+K+F+N                    
Subjt:  RITP---------------------------------------------------------YPFDEAATIALSTVKEFSNGL------------------

Query:  --KETFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQP
          KETFKRRNGGRNKH RGHVK IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VYD YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R P
Subjt:  --KETFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQP

Query:  PQRFIRRRDDQPKPGQPGQAPRPAGAGIPA
        P RF+RR++D PKPGQPGQAPRPAGAG  A
Subjt:  PQRFIRRRDDQPKPGQPGQAPRPAGAGIPA

CAG7908321.1 unnamed protein product [Brassica rapa]1.3e-8151.69Show/hide
Query:  SGVVRFKVSPSTACVIQKGDITKWFIDGSSDAIVEMGRCCRNCFPIAMLRDLEVNPANEVMLGGGGADGAIHNAAGPDLVQACYSVQEVQPGIRCPTGEA
        SG V F +S S+   I KGDITKW +D SSDAI                    VNPANE MLGGGGADGAIH AAGP L  ACY V E +PG+RCP GEA
Subjt:  SGVVRFKVSPSTACVIQKGDITKWFIDGSSDAIVEMGRCCRNCFPIAMLRDLEVNPANEVMLGGGGADGAIHNAAGPDLVQACYSVQEVQPGIRCPTGEA

Query:  RITP---------------------------------------------------------YPFDEAATIALSTVKEFSNGLKE----------------
        RITP                                                         YPFDEAA + +ST+KEF+N  KE                
Subjt:  RITP---------------------------------------------------------YPFDEAATIALSTVKEFSNGLKE----------------

Query:  ------------------------------TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKM
                                      TFKRRNGGRNKH RGHVK IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VYD YTLPKLYAK 
Subjt:  ------------------------------TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKM

Query:  QYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRRDDQPKPGQPGQAPRPAGAGIPA
        QYCVSCAIHSHVVRVRSRT+RR R PP RF+RR++D PKPGQPGQAPRPAGAG  A
Subjt:  QYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRRDDQPKPGQPGQAPRPAGAGIPA

KAF5752623.1 hypothetical protein HS088_TW01G00538 [Tripterygium wilfordii]5.4e-9156.89Show/hide
Query:  MSNGSGSGVVRFKVSPSTACVIQKGDITKWFIDGSSDAIVEMGRCCRNCFPIAMLRDLEVNPANEVMLGGGGADGAIHNAAGPDLVQACYSVQEVQPGIR
        MS  S +G  RF++SPS+   I+KGDIT WF+DGSSDAI                    VN  NE MLGGGGADGAIH AAGP+L +ACY V EV+PG+R
Subjt:  MSNGSGSGVVRFKVSPSTACVIQKGDITKWFIDGSSDAIVEMGRCCRNCFPIAMLRDLEVNPANEVMLGGGGADGAIHNAAGPDLVQACYSVQEVQPGIR

Query:  CPTGEARITP---------------------------------------------------------YPFDEAATIALSTVKEFSNGLKE----------
        CPTGEARITP                                                         YP++EAA++A+ST+KEF+NG+KE          
Subjt:  CPTGEARITP---------------------------------------------------------YPFDEAATIALSTVKEFSNGLKE----------

Query:  -------------TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRS
                     TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRD+QEA VY+QYTLPKLYAK+QYCVSCAIHSHVVRVRS
Subjt:  -------------TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRS

Query:  RTDRRNRQPPQRFIRRRDDQPK---PGQPGQAPRPAGAGIP
        R +RR R+PPQRFIRRRDD PK   PGQPGQAPRPAGAG P
Subjt:  RTDRRNRQPPQRFIRRRDDQPK---PGQPGQAPRPAGAGIP

PPD72875.1 hypothetical protein GOBAR_DD30220 [Gossypium barbadense]5.4e-8361.9Show/hide
Query:  FKVSPSTACVIQKGDITKWFIDGSSDAIVEMGRCCRNCFPIAMLRDLEVNPANEVMLGGGGADGAIHNAAGPDLVQACYSVQEVQPGIRCPTGEARITP-
        FK+S ++   I KGDITKWFIDGSSDAI                    VNPAN  MLGGGGADGAIH AAGP+L +ACY V EVQPGIRCPTGEARITP 
Subjt:  FKVSPSTACVIQKGDITKWFIDGSSDAIVEMGRCCRNCFPIAMLRDLEVNPANEVMLGGGGADGAIHNAAGPDLVQACYSVQEVQPGIRCPTGEARITP-

Query:  --------------------------------------------------------YPFDEAATIALSTVKEFSNGLKETFKRRNGGRNKHGRGHVKFIR
                                                                YP++EAAT+ALST+KEF+N +KETFKRRNGGRNKHGRGHVKFIR
Subjt:  --------------------------------------------------------YPFDEAATIALSTVKEFSNGLKETFKRRNGGRNKHGRGHVKFIR

Query:  CSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNR
        CSNCGKCCPKDK+IKRFLVRNIVEQAAVRDVQEACVYD YTLPKLY KMQYCVSCAIHSHVVRVRSRTDRR R
Subjt:  CSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNR

PPS14985.1 hypothetical protein GOBAR_AA05581 [Gossypium barbadense]2.3e-8157.23Show/hide
Query:  FKVSPSTACVIQKGDITKWFIDGSSDAIVEMGRCCRNCFPIAMLRDLEVNPANEVMLGGGGADGAIHNAAGPDLVQACYSVQEVQPGIRCPTGEARITP-
        FK+S ++   I KGDITKWFIDGSSDAI                    VNPAN  MLGGGGADGAIH AAGP+L +ACY V EVQPGIRCPTGEARITP 
Subjt:  FKVSPSTACVIQKGDITKWFIDGSSDAIVEMGRCCRNCFPIAMLRDLEVNPANEVMLGGGGADGAIHNAAGPDLVQACYSVQEVQPGIRCPTGEARITP-

Query:  ------------------------YPFDEAATIA---------------LSTV-------KEFSNGLKETFKR-----------------------RNGG
                                Y  D+ A  A               + TV       K+    L+  +K                         NGG
Subjt:  ------------------------YPFDEAATIA---------------LSTV-------KEFSNGLKETFKR-----------------------RNGG

Query:  RNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRRDDQP
        RNKHGRGHVKFIRCSNCGKCCPKDK+IKRFLVRNIVEQAAVRDVQEACVYD YTLPKLY KMQYCVSCAIHSHVVRVRSRTDRR R PP RFIRRRDD P
Subjt:  RNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRRDDQP

Query:  KPGQPGQAPRPAGAGIPA
        KPGQPGQAPRP G   PA
Subjt:  KPGQPGQAPRPAGAGIPA

TrEMBL top hitse value%identityAlignment
A0A0D3C5G6 Uncharacterized protein6.5e-8252.6Show/hide
Query:  SGVVRFKVSPSTACVIQKGDITKWFIDGSSDAIVEMGRCCRNCFPIAMLRDLEVNPANEVMLGGGGADGAIHNAAGPDLVQACYSVQEVQPGIRCPTGEA
        SG V F +S S+   I KGDITKW +D SSDAI                    VNPANE MLGGGGADGAIH AAGP L  ACY V EV+PG+RCP GEA
Subjt:  SGVVRFKVSPSTACVIQKGDITKWFIDGSSDAIVEMGRCCRNCFPIAMLRDLEVNPANEVMLGGGGADGAIHNAAGPDLVQACYSVQEVQPGIRCPTGEA

Query:  RITP---------------------------------------------------------YPFDEAATIALSTVKEFSNGLKE----------------
        RITP                                                         YPFDEAA + +ST+KEF+N  KE                
Subjt:  RITP---------------------------------------------------------YPFDEAATIALSTVKEFSNGLKE----------------

Query:  ------------------------TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSC
                                TFKRRNGGRNKH RGHVK IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VYD YTLPKLYAK QYCVSC
Subjt:  ------------------------TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSC

Query:  AIHSHVVRVRSRTDRRNRQPPQRFIRRRDDQPKPGQPGQAPRPAGA
        AIHSHVVRVRSRT+RR R PP RF+RR++D PKPGQPGQ PRPAGA
Subjt:  AIHSHVVRVRSRTDRRNRQPPQRFIRRRDDQPKPGQPGQAPRPAGA

A0A3P6CJE6 Uncharacterized protein6.5e-8251.69Show/hide
Query:  SGVVRFKVSPSTACVIQKGDITKWFIDGSSDAIVEMGRCCRNCFPIAMLRDLEVNPANEVMLGGGGADGAIHNAAGPDLVQACYSVQEVQPGIRCPTGEA
        SG V F +S S+   I KGDITKW +D SSDAI                    VNPANE MLGGGGADGAIH AAGP L  ACY V E +PG+RCP GEA
Subjt:  SGVVRFKVSPSTACVIQKGDITKWFIDGSSDAIVEMGRCCRNCFPIAMLRDLEVNPANEVMLGGGGADGAIHNAAGPDLVQACYSVQEVQPGIRCPTGEA

Query:  RITP---------------------------------------------------------YPFDEAATIALSTVKEFSNGLKE----------------
        RITP                                                         YPFDEAA + +ST+KEF+N  KE                
Subjt:  RITP---------------------------------------------------------YPFDEAATIALSTVKEFSNGLKE----------------

Query:  ------------------------------TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKM
                                      TFKRRNGGRNKH RGHVK IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VYD YTLPKLYAK 
Subjt:  ------------------------------TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKM

Query:  QYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRRDDQPKPGQPGQAPRPAGAGIPA
        QYCVSCAIHSHVVRVRSRT+RR R PP RF+RR++D PKPGQPGQAPRPAGAG  A
Subjt:  QYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRRDDQPKPGQPGQAPRPAGAGIPA

A0A3P6CZH7 Uncharacterized protein1.1e-8152.3Show/hide
Query:  SGVVRFKVSPSTACVIQKGDITKWFIDGSSDAIVEMGRCCRNCFPIAMLRDLEVNPANEVMLGGGGADGAIHNAAGPDLVQACYSVQEVQPGIRCPTGEA
        SG V F +S S+   I KGDITKW +D SSDAI                    VNPANE MLGGGGADGAIH AAGP L  ACY V EV+PG+RCP GEA
Subjt:  SGVVRFKVSPSTACVIQKGDITKWFIDGSSDAIVEMGRCCRNCFPIAMLRDLEVNPANEVMLGGGGADGAIHNAAGPDLVQACYSVQEVQPGIRCPTGEA

Query:  RITP---------------------------------------------------------YPFDEAATIALSTVKEFSNGLKE----------------
        RITP                                                         YPFDEAA + +ST+KEF+N  KE                
Subjt:  RITP---------------------------------------------------------YPFDEAATIALSTVKEFSNGLKE----------------

Query:  --------------------------TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCV
                                  TFKRRNGGRNKH RGHVK IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VYD YTLPKLYAK QYCV
Subjt:  --------------------------TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCV

Query:  SCAIHSHVVRVRSRTDRRNRQPPQRFIRRRDDQPKPGQPGQAPRPAGA
        SCAIHSHVVRVRSRT+RR R PP RF+RR++D PKPGQPGQ PRPAGA
Subjt:  SCAIHSHVVRVRSRTDRRNRQPPQRFIRRRDDQPKPGQPGQAPRPAGA

A0A7J7E269 Macro domain-containing protein2.6e-9156.89Show/hide
Query:  MSNGSGSGVVRFKVSPSTACVIQKGDITKWFIDGSSDAIVEMGRCCRNCFPIAMLRDLEVNPANEVMLGGGGADGAIHNAAGPDLVQACYSVQEVQPGIR
        MS  S +G  RF++SPS+   I+KGDIT WF+DGSSDAI                    VN  NE MLGGGGADGAIH AAGP+L +ACY V EV+PG+R
Subjt:  MSNGSGSGVVRFKVSPSTACVIQKGDITKWFIDGSSDAIVEMGRCCRNCFPIAMLRDLEVNPANEVMLGGGGADGAIHNAAGPDLVQACYSVQEVQPGIR

Query:  CPTGEARITP---------------------------------------------------------YPFDEAATIALSTVKEFSNGLKE----------
        CPTGEARITP                                                         YP++EAA++A+ST+KEF+NG+KE          
Subjt:  CPTGEARITP---------------------------------------------------------YPFDEAATIALSTVKEFSNGLKE----------

Query:  -------------TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRS
                     TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRD+QEA VY+QYTLPKLYAK+QYCVSCAIHSHVVRVRS
Subjt:  -------------TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRS

Query:  RTDRRNRQPPQRFIRRRDDQPK---PGQPGQAPRPAGAGIP
        R +RR R+PPQRFIRRRDD PK   PGQPGQAPRPAGAG P
Subjt:  RTDRRNRQPPQRFIRRRDDQPK---PGQPGQAPRPAGAGIP

M4DKF2 Uncharacterized protein6.0e-8859.03Show/hide
Query:  SGVVRFKVSPSTACVIQKGDITKWFIDGSSDAIVEMGRCCRNCFPIAMLRDLEVNPANEVMLGGGGADGAIHNAAGPDLVQACYSVQEVQPGIRCPTGEA
        SG V F +S S+   I KGDITKW +D SSDAI                    VNPANE MLGGGGADGAIH AAGP L  ACY V E +PG+RCP GEA
Subjt:  SGVVRFKVSPSTACVIQKGDITKWFIDGSSDAIVEMGRCCRNCFPIAMLRDLEVNPANEVMLGGGGADGAIHNAAGPDLVQACYSVQEVQPGIRCPTGEA

Query:  RITP---------------------------------------------------------YPFDEAATIALSTVKEFSNGLKETFKRRNGGRNKHGRGH
        RITP                                                         YPFDEAA + +ST+KEF++  KETFKRRNGGRNKH RGH
Subjt:  RITP---------------------------------------------------------YPFDEAATIALSTVKEFSNGLKETFKRRNGGRNKHGRGH

Query:  VKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRRDDQPKPGQPGQA
        VK IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VYD YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP RF+RR++D PKPGQPGQA
Subjt:  VKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRRDDQPKPGQPGQA

Query:  PRPAGAGIPA
        PRPAGAG  A
Subjt:  PRPAGAGIPA

SwissProt top hitse value%identityAlignment
O45499 40S ribosomal protein S268.0e-3767.23Show/hide
Query:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRF
        TFKRRN GRNK  RGHV FIRC+NCG+CCPKDKAIK+F+VRNIVE AAVRD+ +A  Y QY LPKLY K+ YC++CAIHS VVR RSR  RR+R PP RF
Subjt:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRF

Query:  IRRRDDQPKPGQPGQAPRP
          +R    +PG PG  PRP
Subjt:  IRRRDDQPKPGQPGQAPRP

P49206 40S ribosomal protein S26-16.5e-5584.13Show/hide
Query:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRF
        TFKRRNGGRNKH RGHV  IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP RF
Subjt:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRF

Query:  IRRRDDQPKPGQPGQAPRPAGAGIPA
         RR++D PKPGQPGQAPRPAG G  A
Subjt:  IRRRDDQPKPGQPGQAPRPAGAGIPA

P49216 40S ribosomal protein S262.4e-4973.68Show/hide
Query:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRF
        TFKRRNGGRNKHGRGHVK+IRCSNC KCCPKDKAIKRF VRNIVEQAA+RDVQEACV+D Y LPKLYAK+ +CVSCAIH+H+VRVRSR +RR+R+PP+RF
Subjt:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRF

Query:  IRRRDDQPKPGQP-GQAPRPAGAGIPAHGIVGT
         RRR+D+P+  +P G AP P GA  PA  +  T
Subjt:  IRRRDDQPKPGQP-GQAPRPAGAGIPAHGIVGT

Q8LPJ7 40S ribosomal protein S26-26.5e-5584.13Show/hide
Query:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRF
        TFKRRNGGRNKH RGHV  IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP RF
Subjt:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRF

Query:  IRRRDDQPKPGQPGQAPRPAGAGIPA
         RR++D PKPGQPGQAPRPAG G  A
Subjt:  IRRRDDQPKPGQPGQAPRPAGAGIPA

Q9LYK9 40S ribosomal protein S26-31.9e-5484.92Show/hide
Query:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRF
        TFKRRNGGRNKH RGHVK IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP RF
Subjt:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRF

Query:  IRRRDDQPKPGQPGQAPRPAGAGIPA
         RR++D PKP QPGQAPRPAG G PA
Subjt:  IRRRDDQPKPGQPGQAPRPAGAGIPA

Arabidopsis top hitse value%identityAlignment
AT2G40510.1 Ribosomal protein S26e family protein4.6e-5684.13Show/hide
Query:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRF
        TFKRRNGGRNKH RGHV  IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP RF
Subjt:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRF

Query:  IRRRDDQPKPGQPGQAPRPAGAGIPA
         RR++D PKPGQPGQAPRPAG G  A
Subjt:  IRRRDDQPKPGQPGQAPRPAGAGIPA

AT2G40590.1 Ribosomal protein S26e family protein4.6e-5684.13Show/hide
Query:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRF
        TFKRRNGGRNKH RGHV  IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP RF
Subjt:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRF

Query:  IRRRDDQPKPGQPGQAPRPAGAGIPA
         RR++D PKPGQPGQAPRPAG G  A
Subjt:  IRRRDDQPKPGQPGQAPRPAGAGIPA

AT2G40600.1 appr-1-p processing enzyme family protein3.4e-2740.1Show/hide
Query:  MAMSNGSGSGVVRFKVSPSTACVIQKGDITKWFIDGSSDAIVEMGRCCRNCFPIAMLRDLEVNPANEVMLGGGGADGAIHNAAGPDLVQACYSVQEVQPG
        ++ S  SG     F +S S+   I KGDITKW +D SSDAI                    VNPANE MLGGGGADGAIH AAGP L  ACY V EV+PG
Subjt:  MAMSNGSGSGVVRFKVSPSTACVIQKGDITKWFIDGSSDAIVEMGRCCRNCFPIAMLRDLEVNPANEVMLGGGGADGAIHNAAGPDLVQACYSVQEVQPG

Query:  IRCPTGEARITP---------------------------------------------------------YPFDEAATIALSTVKEFSNGLKE
        +RCPTGEARITP                                                         YPFDEAA I +ST+K+FS   KE
Subjt:  IRCPTGEARITP---------------------------------------------------------YPFDEAATIALSTVKEFSNGLKE

AT3G56340.1 Ribosomal protein S26e family protein1.3e-5584.92Show/hide
Query:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRF
        TFKRRNGGRNKH RGHVK IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP RF
Subjt:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRF

Query:  IRRRDDQPKPGQPGQAPRPAGAGIPA
         RR++D PKP QPGQAPRPAG G PA
Subjt:  IRRRDDQPKPGQPGQAPRPAGAGIPA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATGTCGAATGGATCGGGCAGTGGAGTGGTTCGCTTCAAAGTATCTCCCTCAACCGCCTGCGTTATTCAGAAGGGTGACATCACAAAGTGGTTCATCGATGGTTC
TTCTGATGCCATTGTCGAAATGGGTAGATGCTGTAGGAATTGCTTCCCCATTGCTATGCTTCGCGACCTGGAGGTTAATCCAGCTAATGAAGTAATGCTTGGAGGTGGTG
GTGCTGATGGAGCGATACATAATGCTGCTGGACCTGATCTCGTGCAAGCATGTTATTCTGTCCAAGAAGTCCAACCTGGAATCCGCTGTCCAACTGGAGAAGCAAGGATT
ACTCCATATCCTTTTGATGAAGCTGCCACAATAGCCTTATCAACCGTTAAAGAGTTTTCCAATGGCTTGAAAGAGACTTTCAAGCGCAGGAACGGTGGACGTAACAAGCA
CGGCCGTGGACACGTTAAGTTCATCAGGTGCTCCAACTGCGGCAAATGCTGCCCCAAGGACAAGGCTATTAAGAGGTTTCTCGTGAGGAATATTGTGGAGCAGGCTGCTG
TTAGGGATGTCCAAGAAGCCTGTGTCTATGACCAATACACTCTTCCTAAGCTTTATGCTAAGATGCAGTACTGTGTTTCCTGTGCCATTCACTCACATGTTGTGAGAGTT
CGATCTCGTACTGATAGAAGAAATCGGCAACCACCACAGCGTTTCATCAGACGCAGGGATGATCAGCCAAAGCCTGGCCAGCCAGGTCAAGCACCTCGTCCTGCTGGAGC
TGGAATTCCTGCTCATGGAATAGTTGGAACCATTTTGGCTGCAGTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAATGTCGAATGGATCGGGCAGTGGAGTGGTTCGCTTCAAAGTATCTCCCTCAACCGCCTGCGTTATTCAGAAGGGTGACATCACAAAGTGGTTCATCGATGGTTC
TTCTGATGCCATTGTCGAAATGGGTAGATGCTGTAGGAATTGCTTCCCCATTGCTATGCTTCGCGACCTGGAGGTTAATCCAGCTAATGAAGTAATGCTTGGAGGTGGTG
GTGCTGATGGAGCGATACATAATGCTGCTGGACCTGATCTCGTGCAAGCATGTTATTCTGTCCAAGAAGTCCAACCTGGAATCCGCTGTCCAACTGGAGAAGCAAGGATT
ACTCCATATCCTTTTGATGAAGCTGCCACAATAGCCTTATCAACCGTTAAAGAGTTTTCCAATGGCTTGAAAGAGACTTTCAAGCGCAGGAACGGTGGACGTAACAAGCA
CGGCCGTGGACACGTTAAGTTCATCAGGTGCTCCAACTGCGGCAAATGCTGCCCCAAGGACAAGGCTATTAAGAGGTTTCTCGTGAGGAATATTGTGGAGCAGGCTGCTG
TTAGGGATGTCCAAGAAGCCTGTGTCTATGACCAATACACTCTTCCTAAGCTTTATGCTAAGATGCAGTACTGTGTTTCCTGTGCCATTCACTCACATGTTGTGAGAGTT
CGATCTCGTACTGATAGAAGAAATCGGCAACCACCACAGCGTTTCATCAGACGCAGGGATGATCAGCCAAAGCCTGGCCAGCCAGGTCAAGCACCTCGTCCTGCTGGAGC
TGGAATTCCTGCTCATGGAATAGTTGGAACCATTTTGGCTGCAGTATAG
Protein sequenceShow/hide protein sequence
MAMSNGSGSGVVRFKVSPSTACVIQKGDITKWFIDGSSDAIVEMGRCCRNCFPIAMLRDLEVNPANEVMLGGGGADGAIHNAAGPDLVQACYSVQEVQPGIRCPTGEARI
TPYPFDEAATIALSTVKEFSNGLKETFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRV
RSRTDRRNRQPPQRFIRRRDDQPKPGQPGQAPRPAGAGIPAHGIVGTILAAV