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CmoCh04G011600 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G011600
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionprotein trichome birefringence-like 33
Genome locationCmo_Chr04:5916083..5916835
RNA-Seq ExpressionCmoCh04G011600
SyntenyCmoCh04G011600
Gene Ontology termsGO:0009834 - plant-type secondary cell wall biogenesis (biological process)
GO:1990937 - xylan acetylation (biological process)
GO:0005794 - Golgi apparatus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:1990538 - xylan O-acetyltransferase activity (molecular function)
InterPro domainsIPR025846 - PMR5 N-terminal domain
IPR029962 - Trichome birefringence-like family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600906.1 Protein trichome birefringence-like 33, partial [Cucurbita argyrosperma subsp. sororia]3.0e-7597.24Show/hide
Query:  MKPPSPNSSSSSSSSSSPSLPRKPRFSPYLFTLLVFIFFVAVLYGEDLACIFSQQLQLNLAPARPSPATQKKWEKLPFAIGKLKEEGCDVFSGRWVRDEV
        MKPPSPN SSSSSSSSSPSLPRKPRFSPYLFTLLVFIFFVAVLYGEDLACIFSQQLQL+LAPARPSPATQKKWEKLPFAIGKLKEEGCDVFSGRWVRDEV
Subjt:  MKPPSPNSSSSSSSSSSPSLPRKPRFSPYLFTLLVFIFFVAVLYGEDLACIFSQQLQLNLAPARPSPATQKKWEKLPFAIGKLKEEGCDVFSGRWVRDEV

Query:  TRPLYDESDCPYIQPQLTCQEHGRPDRSYQYWRWQPHGCDLPSLD
        TRPLYDESDCPYIQPQLTCQEHGRPDRSYQYWRWQPHGCDLPS +
Subjt:  TRPLYDESDCPYIQPQLTCQEHGRPDRSYQYWRWQPHGCDLPSLD

KAG7031540.1 Protein trichome birefringence-like 33, partial [Cucurbita argyrosperma subsp. argyrosperma]3.9e-7596.55Show/hide
Query:  MKPPSPNSSSSSSSSSSPSLPRKPRFSPYLFTLLVFIFFVAVLYGEDLACIFSQQLQLNLAPARPSPATQKKWEKLPFAIGKLKEEGCDVFSGRWVRDEV
        MKPPSPN SSSSSSSSSPSLPRKPRFSPYLFTLLVFIFFVA+LYGEDLACIFSQQLQL+LAPARPSPATQKKWEKLPFAIGKLKEEGCDVFSGRWVRDEV
Subjt:  MKPPSPNSSSSSSSSSSPSLPRKPRFSPYLFTLLVFIFFVAVLYGEDLACIFSQQLQLNLAPARPSPATQKKWEKLPFAIGKLKEEGCDVFSGRWVRDEV

Query:  TRPLYDESDCPYIQPQLTCQEHGRPDRSYQYWRWQPHGCDLPSLD
        TRPLYDESDCPYIQPQLTCQEHGRPDRSYQYWRWQPHGCDLPS +
Subjt:  TRPLYDESDCPYIQPQLTCQEHGRPDRSYQYWRWQPHGCDLPSLD

XP_022957092.1 protein trichome birefringence-like 33 isoform X1 [Cucurbita moschata]1.4e-7798.62Show/hide
Query:  MKPPSPNSSSSSSSSSSPSLPRKPRFSPYLFTLLVFIFFVAVLYGEDLACIFSQQLQLNLAPARPSPATQKKWEKLPFAIGKLKEEGCDVFSGRWVRDEV
        MKPPSPNSSSSSSSSSSPSLPRKPRFSPYLFTLLVFIFFVAVLYGEDLACIFSQQLQLNLAPARPSPATQKKWEKLPFAIGKLKEEGCDVFSGRWVRDEV
Subjt:  MKPPSPNSSSSSSSSSSPSLPRKPRFSPYLFTLLVFIFFVAVLYGEDLACIFSQQLQLNLAPARPSPATQKKWEKLPFAIGKLKEEGCDVFSGRWVRDEV

Query:  TRPLYDESDCPYIQPQLTCQEHGRPDRSYQYWRWQPHGCDLPSLD
        TRPLYDESDCPYIQPQLTCQEHGRPDRSYQYWRWQPHGCDLPS +
Subjt:  TRPLYDESDCPYIQPQLTCQEHGRPDRSYQYWRWQPHGCDLPSLD

XP_023542923.1 protein trichome birefringence-like 33 isoform X1 [Cucurbita pepo subsp. pepo]9.6e-7496.5Show/hide
Query:  PPSPNSSSSSSSSSSPSLPRKPRFSPYLFTLLVFIFFVAVLYGEDLACIFSQQLQLNLAPARPSPATQKKWEKLPFAIGKLKEEGCDVFSGRWVRDEVTR
        PPSPN +SSSSSSSSPSLPRKPRFSPYLFTLLVFIFFVAVLYGEDLACIFSQQLQL+LAPARPSPATQKKWEKLPFAIGKLKEEGCDVFSGRWVRDEVTR
Subjt:  PPSPNSSSSSSSSSSPSLPRKPRFSPYLFTLLVFIFFVAVLYGEDLACIFSQQLQLNLAPARPSPATQKKWEKLPFAIGKLKEEGCDVFSGRWVRDEVTR

Query:  PLYDESDCPYIQPQLTCQEHGRPDRSYQYWRWQPHGCDLPSLD
        PLYDESDCPYIQPQLTCQEHGRPDRSYQYWRWQPHGCDLPS +
Subjt:  PLYDESDCPYIQPQLTCQEHGRPDRSYQYWRWQPHGCDLPSLD

XP_023542931.1 protein trichome birefringence-like 33 isoform X2 [Cucurbita pepo subsp. pepo]6.6e-7596.55Show/hide
Query:  MKPPSPNSSSSSSSSSSPSLPRKPRFSPYLFTLLVFIFFVAVLYGEDLACIFSQQLQLNLAPARPSPATQKKWEKLPFAIGKLKEEGCDVFSGRWVRDEV
        MKPPSPN +SSSSSSSSPSLPRKPRFSPYLFTLLVFIFFVAVLYGEDLACIFSQQLQL+LAPARPSPATQKKWEKLPFAIGKLKEEGCDVFSGRWVRDEV
Subjt:  MKPPSPNSSSSSSSSSSPSLPRKPRFSPYLFTLLVFIFFVAVLYGEDLACIFSQQLQLNLAPARPSPATQKKWEKLPFAIGKLKEEGCDVFSGRWVRDEV

Query:  TRPLYDESDCPYIQPQLTCQEHGRPDRSYQYWRWQPHGCDLPSLD
        TRPLYDESDCPYIQPQLTCQEHGRPDRSYQYWRWQPHGCDLPS +
Subjt:  TRPLYDESDCPYIQPQLTCQEHGRPDRSYQYWRWQPHGCDLPSLD

TrEMBL top hitse value%identityAlignment
A0A0A0KM73 PMR5N domain-containing protein6.3e-6383.11Show/hide
Query:  MKPPSPNSSSSSSSSSSPSLPRKPRFSPYLFTLLVFIFFVAVLYGEDLACIFSQQLQLNLAPARPSPATQKKWEKLPFAIGKLK---EEGCDVFSGRWVR
        MKPPSP SSSS       SL RKPRFSPYLFTLL FIFFVAVLY EDLACIFSQQL+L+L P RPSPAT+KKWEKL FA GKLK   EEGCDV+SG+WVR
Subjt:  MKPPSPNSSSSSSSSSSPSLPRKPRFSPYLFTLLVFIFFVAVLYGEDLACIFSQQLQLNLAPARPSPATQKKWEKLPFAIGKLK---EEGCDVFSGRWVR

Query:  DEVTRPLYDESDCPYIQPQLTCQEHGRPDRSYQYWRWQPHGCDLPSLD
        DEVTRPLYDESDCPYIQPQLTCQEHGRPDRSYQYWRWQPHGCDLPS +
Subjt:  DEVTRPLYDESDCPYIQPQLTCQEHGRPDRSYQYWRWQPHGCDLPSLD

A0A1S3BZM0 protein trichome birefringence-like 338.2e-6382.31Show/hide
Query:  MKPPSPNSSSSSSSSSSPSLPRKPRFSPYLFTLLVFIFFVAVLYGEDLACIFSQQLQLNLAPARPSPATQKKWEKLPFAIGKLKE--EGCDVFSGRWVRD
        MKPPSP SSSS       +L RKPRFSPYLFTLL FIFFVA+LYGEDLACIFSQQL+L+L P RPSP T+KKWEKL FA GKLKE  EGCDV+SG+WVRD
Subjt:  MKPPSPNSSSSSSSSSSPSLPRKPRFSPYLFTLLVFIFFVAVLYGEDLACIFSQQLQLNLAPARPSPATQKKWEKLPFAIGKLKE--EGCDVFSGRWVRD

Query:  EVTRPLYDESDCPYIQPQLTCQEHGRPDRSYQYWRWQPHGCDLPSLD
        EVTRPLYDESDCPYIQPQLTCQEHGRPDRSYQYWRWQPHGCDLPS +
Subjt:  EVTRPLYDESDCPYIQPQLTCQEHGRPDRSYQYWRWQPHGCDLPSLD

A0A6J1CYY7 protein trichome birefringence-like 332.3e-6584.83Show/hide
Query:  MKPPSPNSSSSSSSSSSPSLPRKPRFSPYLFTLLVFIFFVAVLYGEDLACIFSQQLQLNLAPARPSPATQKKWEKLPFAIGKLKEEGCDVFSGRWVRDEV
        MKPPSPNSSS        SL RKPRFSPYLFTLL FIFFVAVLYGEDL CIFSQQLQL+LA AR  PAT+KKWE+LPFA+GKL EEGCDV+SGRWVRDEV
Subjt:  MKPPSPNSSSSSSSSSSPSLPRKPRFSPYLFTLLVFIFFVAVLYGEDLACIFSQQLQLNLAPARPSPATQKKWEKLPFAIGKLKEEGCDVFSGRWVRDEV

Query:  TRPLYDESDCPYIQPQLTCQEHGRPDRSYQYWRWQPHGCDLPSLD
        TRPLYDESDCPYIQPQLTCQEHGRPDRSYQYWRWQPHGCDLPS +
Subjt:  TRPLYDESDCPYIQPQLTCQEHGRPDRSYQYWRWQPHGCDLPSLD

A0A6J1GY75 protein trichome birefringence-like 33 isoform X16.9e-7898.62Show/hide
Query:  MKPPSPNSSSSSSSSSSPSLPRKPRFSPYLFTLLVFIFFVAVLYGEDLACIFSQQLQLNLAPARPSPATQKKWEKLPFAIGKLKEEGCDVFSGRWVRDEV
        MKPPSPNSSSSSSSSSSPSLPRKPRFSPYLFTLLVFIFFVAVLYGEDLACIFSQQLQLNLAPARPSPATQKKWEKLPFAIGKLKEEGCDVFSGRWVRDEV
Subjt:  MKPPSPNSSSSSSSSSSPSLPRKPRFSPYLFTLLVFIFFVAVLYGEDLACIFSQQLQLNLAPARPSPATQKKWEKLPFAIGKLKEEGCDVFSGRWVRDEV

Query:  TRPLYDESDCPYIQPQLTCQEHGRPDRSYQYWRWQPHGCDLPSLD
        TRPLYDESDCPYIQPQLTCQEHGRPDRSYQYWRWQPHGCDLPS +
Subjt:  TRPLYDESDCPYIQPQLTCQEHGRPDRSYQYWRWQPHGCDLPSLD

A0A6J1IQH2 protein trichome birefringence-like 33 isoform X16.7e-7393.1Show/hide
Query:  MKPPSPNSSSSSSSSSSPSLPRKPRFSPYLFTLLVFIFFVAVLYGEDLACIFSQQLQLNLAPARPSPATQKKWEKLPFAIGKLKEEGCDVFSGRWVRDEV
        MKPPSP     SSSSSSPSLPRKPRFSPYLFTLLVFIFFVA+LYGEDLACIFS QLQL+LAPARPSPATQKKWEKLPFAIGKLKEEGCDVFSGRWVRDEV
Subjt:  MKPPSPNSSSSSSSSSSPSLPRKPRFSPYLFTLLVFIFFVAVLYGEDLACIFSQQLQLNLAPARPSPATQKKWEKLPFAIGKLKEEGCDVFSGRWVRDEV

Query:  TRPLYDESDCPYIQPQLTCQEHGRPDRSYQYWRWQPHGCDLPSLD
        TRPLYDESDCPYIQPQLTCQEHGRPDRSYQYWRWQPHGCDLPS +
Subjt:  TRPLYDESDCPYIQPQLTCQEHGRPDRSYQYWRWQPHGCDLPSLD

SwissProt top hitse value%identityAlignment
F4IH21 Protein trichome birefringence-like 337.9e-4765.52Show/hide
Query:  MKPPSPNSSSSSSSSSSPSLPRKPRFSPYLFTLLVFIFFVAVLYGEDLACIFSQQLQLNLAPARPSPATQKKWEKLPFAIGKLKEEGCDVFSGRWVRDEV
        MKP SP S +SS      S+ RK RFSPYLFTLL FI FV+VLYGED  CIF Q     + P   +P   KK EKL FAIGK  EE CDVFSG+WVRDEV
Subjt:  MKPPSPNSSSSSSSSSSPSLPRKPRFSPYLFTLLVFIFFVAVLYGEDLACIFSQQLQLNLAPARPSPATQKKWEKLPFAIGKLKEEGCDVFSGRWVRDEV

Query:  TRPLYDESDCPYIQPQLTCQEHGRPDRSYQYWRWQPHGCDLPSLD
        +RPLY+E +CPYIQPQLTCQEHGRPD+ YQ+WRWQP+ CDLPS +
Subjt:  TRPLYDESDCPYIQPQLTCQEHGRPDRSYQYWRWQPHGCDLPSLD

Q1PFD9 Protein trichome birefringence-like 311.0e-1753.85Show/hide
Query:  EEGCDVFSGRWVRDEVTRPLYDESDCPYIQPQLTCQEHGRPDRSYQYWRWQPHGCDLPSLDEIVL
        +E C+VF G+WV D V+ PLY E  CPY+  Q TCQ +GRPD  YQ WRW+P  CDLP  + + L
Subjt:  EEGCDVFSGRWVRDEVTRPLYDESDCPYIQPQLTCQEHGRPDRSYQYWRWQPHGCDLPSLDEIVL

Q8RXQ1 Protein trichome birefringence-like 351.1e-1659.32Show/hide
Query:  KEEGCDVFSGRWVRDEVTR-PLYDESDCPYIQPQLTCQEHGRPDRSYQYWRWQPHGCDL
        +E+ CDVFSG+WV D  +  PL+ ES CPY+  QL CQ+HGR D  YQ+WRWQPH C+L
Subjt:  KEEGCDVFSGRWVRDEVTR-PLYDESDCPYIQPQLTCQEHGRPDRSYQYWRWQPHGCDL

Q9SEZ9 Protein trichome birefringence-like 306.6e-1740.82Show/hide
Query:  SQQLQLNLAPARPSPATQ-KKWEKLPFAIGKLKEEGCDVFSGRWVRDEVTRPLYDESDCPYIQPQLTCQEHGRPDRSYQYWRWQPHGCDLPSLDEIVL
        +  LQ ++ P + S   + KK + +P        E CDVF+G+WV D VT PLY E +C ++   + C  +GRPD  YQ WRWQP  C LP  D  +L
Subjt:  SQQLQLNLAPARPSPATQ-KKWEKLPFAIGKLKEEGCDVFSGRWVRDEVTRPLYDESDCPYIQPQLTCQEHGRPDRSYQYWRWQPHGCDLPSLDEIVL

Q9SRL3 Protein trichome birefringence-like 321.8e-2741.98Show/hide
Query:  SPSLPRKPRFSPYLFTLLVFIFFVAVLYGEDLACIFSQQLQLNL-------------------------APARPSPATQKKWEKLP----FAIGKLKEEG
        SPS  RK R + + FT+L FI   A +YG D      + L                             +P  PSP         P    FA+GK   EG
Subjt:  SPSLPRKPRFSPYLFTLLVFIFFVAVLYGEDLACIFSQQLQLNL-------------------------APARPSPATQKKWEKLP----FAIGKLKEEG

Query:  CDVFSGRWVRDEVTRPLYDESDCPYIQPQLTCQEHGRPDRSYQYWRWQPHGCDLPSLDEIVL
        CDVF G WV+D  TRPLY ES+CPYIQPQLTC+ HGRPD  YQ WRW+P  C LPS +  V+
Subjt:  CDVFSGRWVRDEVTRPLYDESDCPYIQPQLTCQEHGRPDRSYQYWRWQPHGCDLPSLDEIVL

Arabidopsis top hitse value%identityAlignment
AT1G73140.1 Plant protein of unknown function (DUF828)7.2e-1953.85Show/hide
Query:  EEGCDVFSGRWVRDEVTRPLYDESDCPYIQPQLTCQEHGRPDRSYQYWRWQPHGCDLPSLDEIVL
        +E C+VF G+WV D V+ PLY E  CPY+  Q TCQ +GRPD  YQ WRW+P  CDLP  + + L
Subjt:  EEGCDVFSGRWVRDEVTRPLYDESDCPYIQPQLTCQEHGRPDRSYQYWRWQPHGCDLPSLDEIVL

AT2G40160.1 Plant protein of unknown function (DUF828)4.7e-1840.82Show/hide
Query:  SQQLQLNLAPARPSPATQ-KKWEKLPFAIGKLKEEGCDVFSGRWVRDEVTRPLYDESDCPYIQPQLTCQEHGRPDRSYQYWRWQPHGCDLPSLDEIVL
        +  LQ ++ P + S   + KK + +P        E CDVF+G+WV D VT PLY E +C ++   + C  +GRPD  YQ WRWQP  C LP  D  +L
Subjt:  SQQLQLNLAPARPSPATQ-KKWEKLPFAIGKLKEEGCDVFSGRWVRDEVTRPLYDESDCPYIQPQLTCQEHGRPDRSYQYWRWQPHGCDLPSLDEIVL

AT2G40160.2 Plant protein of unknown function (DUF828)4.7e-1840.82Show/hide
Query:  SQQLQLNLAPARPSPATQ-KKWEKLPFAIGKLKEEGCDVFSGRWVRDEVTRPLYDESDCPYIQPQLTCQEHGRPDRSYQYWRWQPHGCDLPSLDEIVL
        +  LQ ++ P + S   + KK + +P        E CDVF+G+WV D VT PLY E +C ++   + C  +GRPD  YQ WRWQP  C LP  D  +L
Subjt:  SQQLQLNLAPARPSPATQ-KKWEKLPFAIGKLKEEGCDVFSGRWVRDEVTRPLYDESDCPYIQPQLTCQEHGRPDRSYQYWRWQPHGCDLPSLDEIVL

AT2G40320.1 TRICHOME BIREFRINGENCE-LIKE 335.6e-4865.52Show/hide
Query:  MKPPSPNSSSSSSSSSSPSLPRKPRFSPYLFTLLVFIFFVAVLYGEDLACIFSQQLQLNLAPARPSPATQKKWEKLPFAIGKLKEEGCDVFSGRWVRDEV
        MKP SP S +SS      S+ RK RFSPYLFTLL FI FV+VLYGED  CIF Q     + P   +P   KK EKL FAIGK  EE CDVFSG+WVRDEV
Subjt:  MKPPSPNSSSSSSSSSSPSLPRKPRFSPYLFTLLVFIFFVAVLYGEDLACIFSQQLQLNLAPARPSPATQKKWEKLPFAIGKLKEEGCDVFSGRWVRDEV

Query:  TRPLYDESDCPYIQPQLTCQEHGRPDRSYQYWRWQPHGCDLPSLD
        +RPLY+E +CPYIQPQLTCQEHGRPD+ YQ+WRWQP+ CDLPS +
Subjt:  TRPLYDESDCPYIQPQLTCQEHGRPDRSYQYWRWQPHGCDLPSLD

AT3G11030.1 TRICHOME BIREFRINGENCE-LIKE 321.3e-2841.98Show/hide
Query:  SPSLPRKPRFSPYLFTLLVFIFFVAVLYGEDLACIFSQQLQLNL-------------------------APARPSPATQKKWEKLP----FAIGKLKEEG
        SPS  RK R + + FT+L FI   A +YG D      + L                             +P  PSP         P    FA+GK   EG
Subjt:  SPSLPRKPRFSPYLFTLLVFIFFVAVLYGEDLACIFSQQLQLNL-------------------------APARPSPATQKKWEKLP----FAIGKLKEEG

Query:  CDVFSGRWVRDEVTRPLYDESDCPYIQPQLTCQEHGRPDRSYQYWRWQPHGCDLPSLDEIVL
        CDVF G WV+D  TRPLY ES+CPYIQPQLTC+ HGRPD  YQ WRW+P  C LPS +  V+
Subjt:  CDVFSGRWVRDEVTRPLYDESDCPYIQPQLTCQEHGRPDRSYQYWRWQPHGCDLPSLDEIVL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCCTCCTTCTCCCAACTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCCCCTCCCTCCCCAGAAAGCCTCGCTTCTCCCCTTACCTCTTCACTCTCTTGGTCTTCAT
CTTCTTCGTCGCCGTCCTCTACGGCGAAGACCTCGCCTGCATCTTCAGCCAGCAGCTCCAACTCAACCTCGCCCCCGCCCGCCCCTCCCCTGCCACCCAGAAGAAGTGGG
AGAAATTGCCATTTGCAATAGGGAAACTGAAGGAGGAGGGGTGTGACGTGTTCAGTGGGAGGTGGGTTAGAGACGAGGTGACTCGGCCGCTATATGATGAGTCAGACTGT
CCGTACATACAGCCGCAGCTGACGTGTCAGGAACACGGCCGGCCGGACCGGAGTTATCAGTATTGGCGGTGGCAGCCCCACGGCTGCGATCTTCCCAGCTTGGATGAAAT
AGTTCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCCTCCTTCTCCCAACTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCCCCTCCCTCCCCAGAAAGCCTCGCTTCTCCCCTTACCTCTTCACTCTCTTGGTCTTCAT
CTTCTTCGTCGCCGTCCTCTACGGCGAAGACCTCGCCTGCATCTTCAGCCAGCAGCTCCAACTCAACCTCGCCCCCGCCCGCCCCTCCCCTGCCACCCAGAAGAAGTGGG
AGAAATTGCCATTTGCAATAGGGAAACTGAAGGAGGAGGGGTGTGACGTGTTCAGTGGGAGGTGGGTTAGAGACGAGGTGACTCGGCCGCTATATGATGAGTCAGACTGT
CCGTACATACAGCCGCAGCTGACGTGTCAGGAACACGGCCGGCCGGACCGGAGTTATCAGTATTGGCGGTGGCAGCCCCACGGCTGCGATCTTCCCAGCTTGGATGAAAT
AGTTCTTTAA
Protein sequenceShow/hide protein sequence
MKPPSPNSSSSSSSSSSPSLPRKPRFSPYLFTLLVFIFFVAVLYGEDLACIFSQQLQLNLAPARPSPATQKKWEKLPFAIGKLKEEGCDVFSGRWVRDEVTRPLYDESDC
PYIQPQLTCQEHGRPDRSYQYWRWQPHGCDLPSLDEIVL