; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G012150 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G012150
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionSHSP domain-containing protein
Genome locationCmo_Chr04:6171138..6171668
RNA-Seq ExpressionCmoCh04G012150
SyntenyCmoCh04G012150
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BAS70261.1 Os01g0136050, partial [Oryza sativa Japonica Group]3.7e-1649.35Show/hide
Query:  MSMLLTSGFFTSILGTVTVSTPFSMLAFTSSTFAFSGSLNLLMNFPLLLSILCHLS---------------------------------SAFNTWASGVS
        +SM  TSGF TS LGTVTVSTPFSMLAFT ST AFSGSLN  MN PLL S  CHLS                                 SA  T  SGVS
Subjt:  MSMLLTSGFFTSILGTVTVSTPFSMLAFTSSTFAFSGSLNLLMNFPLLLSILCHLS---------------------------------SAFNTWASGVS

Query:  FQSMRVLAKAE-EEGTLARELENGKPSKGSQTSKEKGSKTLLRRPPKMLGINAI
        FQS R LAKA      +A   E   PSKGSQ S  KGS TLLR    ++G++ I
Subjt:  FQSMRVLAKAE-EEGTLARELENGKPSKGSQTSKEKGSKTLLRRPPKMLGINAI

CAG1834096.1 unnamed protein product [Musa acuminata subsp. malaccensis]1.1e-1547.13Show/hide
Query:  MLLTSGFFTSILGTVTVSTPFSMLAFTSSTFAFSGSLNLLMNFPLLLSILCHLS---------------------------------SAFNTWASGVSFQ
        M LTSGF T  LGTVTVSTPFSM AFT ST AFSG  NL  N PLL S  C +S                                 SA NT ASGVSFQ
Subjt:  MLLTSGFFTSILGTVTVSTPFSMLAFTSSTFAFSGSLNLLMNFPLLLSILCHLS---------------------------------SAFNTWASGVSFQ

Query:  SMRVLAKAE-EEGTLA----RELENGKPSKGSQTSKEKGSKTLLRRPPKMLGINAIV
        S R  A A+   GT+A    RE+  GKP  GSQ S+EKGSK   RR P   G++ I+
Subjt:  SMRVLAKAE-EEGTLA----RELENGKPSKGSQTSKEKGSKTLLRRPPKMLGINAIV

KAG6600961.1 18.5 kDa class I heat shock protein, partial [Cucurbita argyrosperma subsp. sororia]7.5e-1779.41Show/hide
Query:  SAFNTWASGVSFQSMRVLAKAE----EEGTLARELENGKPSKGSQTSKEKGSKTLLRRPPKMLGINAI
        SA   WASGVSFQSMRVLAKAE    EEG LA E+ENGKPSKGSQTS EKGSK LLRRPPKMLGI A+
Subjt:  SAFNTWASGVSFQSMRVLAKAE----EEGTLARELENGKPSKGSQTSKEKGSKTLLRRPPKMLGINAI

KVI11914.1 hypothetical protein Ccrd_009654, partial [Cynara cardunculus var. scolymus]6.8e-1848.98Show/hide
Query:  TSGFFTSILGTVTVSTPFSMLAFTSSTFAFSGSLNLLMNFPLLLSILCHLS---------------------------------SAFNTWASGVSFQSMR
        T+GFFTS  GTV VSTPFS+ AFT S FAFSG+LNLL+NFPLL S LCH+S                                 SA  T ASGVSFQS R
Subjt:  TSGFFTSILGTVTVSTPFSMLAFTSSTFAFSGSLNLLMNFPLLLSILCHLS---------------------------------SAFNTWASGVSFQSMR

Query:  VLAKAEE--EGTLARELENGKPSKGSQTSKEKGSKTLLRRPPKMLGI
        V  KAE   + +   E+  GK   GSQ S   GSK L RRPPK LG+
Subjt:  VLAKAEE--EGTLARELENGKPSKGSQTSKEKGSKTLLRRPPKMLGI

VFQ82571.1 unnamed protein product [Cuscuta campestris]1.5e-2051.63Show/hide
Query:  MLLTSGFFTSILGTVTVSTPFSMLAFTSSTFAFSGSLNLLMNFPLLLSILCHLS---------------------------------SAFNTWASGVSFQ
        M LTSGFFTS LGTVTVSTPFSM AFT S FAFSGS N   N PLL S  CHLS                                 SA NTW SGVSFQ
Subjt:  MLLTSGFFTSILGTVTVSTPFSMLAFTSSTFAFSGSLNLLMNFPLLLSILCHLS---------------------------------SAFNTWASGVSFQ

Query:  SMRVLAKAEEEGTLARELENGKPSKGSQTSKEKGSKTLLR-RPPKMLGINAIV
        S+R  A A+    +    ENG P KGSQ S+E GS T LR RPPK LGI  I+
Subjt:  SMRVLAKAEEEGTLARELENGKPSKGSQTSKEKGSKTLLR-RPPKMLGINAIV

TrEMBL top hitse value%identityAlignment
A0A0A0KSC0 Uncharacterized protein7.7e-3662.58Show/hide
Query:  MSMLLTSGFFTSILGTVTVSTPFSMLAFTSSTFAFSGSLNLLMNFPLLLSILCHLS---------------------------------SAFNTWASGVS
        MSM L SGFF+SILGT+TV TPFSMLAFTSST AFSGSLNLLMNFP L SILCHLS                                 SA   WA GVS
Subjt:  MSMLLTSGFFTSILGTVTVSTPFSMLAFTSSTFAFSGSLNLLMNFPLLLSILCHLS---------------------------------SAFNTWASGVS

Query:  FQSMRVLAKAE----EEGTLARELENGKPSKGSQTSKEKGSKTLLRRPPKMLGINAIVVVGEL
        FQSMRVLAKAE    EEG LA+E E GKPSKGSQ S EKGSKTLLRRPPKMLG  A+VV  E+
Subjt:  FQSMRVLAKAE----EEGTLARELENGKPSKGSQTSKEKGSKTLLRRPPKMLGINAIVVVGEL

A0A0D9Z548 SHSP domain-containing protein1.6e-1753.24Show/hide
Query:  MLLTSGFFTSILGTVTVSTPFSMLAFTSSTFAFSGSLNLLMNFPLLLSILCHL--SSAFNTWASGVSFQSMRVLAKAEEEGTLARELE------------
        M LTSGF  S LGTVTVSTPFSM A   S   FSGS NL  N PLL S  CH   +SA NT ASGVSFQSMR  AKA     + R  +            
Subjt:  MLLTSGFFTSILGTVTVSTPFSMLAFTSSTFAFSGSLNLLMNFPLLLSILCHL--SSAFNTWASGVSFQSMRVLAKAEEEGTLARELE------------

Query:  NGKPSKGSQTSKEKGSKTLLRRPPKMLGINAIVVVGELD
         GKPSKGSQ S+EKGS  LLRR   ++GI A + V   D
Subjt:  NGKPSKGSQTSKEKGSKTLLRRPPKMLGINAIVVVGELD

A0A103YMN4 Uncharacterized protein (Fragment)3.3e-1848.98Show/hide
Query:  TSGFFTSILGTVTVSTPFSMLAFTSSTFAFSGSLNLLMNFPLLLSILCHLS---------------------------------SAFNTWASGVSFQSMR
        T+GFFTS  GTV VSTPFS+ AFT S FAFSG+LNLL+NFPLL S LCH+S                                 SA  T ASGVSFQS R
Subjt:  TSGFFTSILGTVTVSTPFSMLAFTSSTFAFSGSLNLLMNFPLLLSILCHLS---------------------------------SAFNTWASGVSFQSMR

Query:  VLAKAEE--EGTLARELENGKPSKGSQTSKEKGSKTLLRRPPKMLGI
        V  KAE   + +   E+  GK   GSQ S   GSK L RRPPK LG+
Subjt:  VLAKAEE--EGTLARELENGKPSKGSQTSKEKGSKTLLRRPPKMLGI

A0A484M1B1 Uncharacterized protein7.0e-2151.63Show/hide
Query:  MLLTSGFFTSILGTVTVSTPFSMLAFTSSTFAFSGSLNLLMNFPLLLSILCHLS---------------------------------SAFNTWASGVSFQ
        M LTSGFFTS LGTVTVSTPFSM AFT S FAFSGS N   N PLL S  CHLS                                 SA NTW SGVSFQ
Subjt:  MLLTSGFFTSILGTVTVSTPFSMLAFTSSTFAFSGSLNLLMNFPLLLSILCHLS---------------------------------SAFNTWASGVSFQ

Query:  SMRVLAKAEEEGTLARELENGKPSKGSQTSKEKGSKTLLR-RPPKMLGINAIV
        S+R  A A+    +    ENG P KGSQ S+E GS T LR RPPK LGI  I+
Subjt:  SMRVLAKAEEEGTLARELENGKPSKGSQTSKEKGSKTLLR-RPPKMLGINAIV

A0A7C9D9Y3 Uncharacterized protein3.3e-1846.5Show/hide
Query:  MLLTSGFFTSILGTVTVSTPFSMLAFTSSTFAFSGSLNLLMNFPLLLSILCHLS---------------------------------SAFNTWASGVSFQ
        M+ TSGFF+S LGTVTVSTPFS+ AFTSS  AFSG  N   N PL  S  CHLS                                 S  NTWASGVSFQ
Subjt:  MLLTSGFFTSILGTVTVSTPFSMLAFTSSTFAFSGSLNLLMNFPLLLSILCHLS---------------------------------SAFNTWASGVSFQ

Query:  SMRVL-----AKAEEEGTLARELENGKPSKGSQTSKEKGSKTLLRRPPKMLGINAIV
        S  VL     ++A E G      E+  PS GSQTS+E GS TL+ R PK LGI+ +V
Subjt:  SMRVL-----AKAEEEGTLARELENGKPSKGSQTSKEKGSKTLLRRPPKMLGINAIV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAATGCTCCTGACTTCTGGCTTCTTCACTTCCATTTTGGGCACCGTCACCGTCAGCACCCCATTCTCCATGTTGGCCTTCACCTCTTCTACTTTCGCATTCTCCGG
CAGCCTGAATCTCCTCATGAACTTCCCACTGCTTCTTTCAATTCTATGCCACTTGTCATCCGCCTTCAACACGTGGGCTTCTGGGGTCTCCTTCCAGTCGATGCGGGTGT
TGGCAAAAGCAGAGGAGGAGGGGACGTTGGCCAGAGAGCTTGAAAATGGTAAGCCTTCGAAAGGATCCCAAACGTCTAAGGAGAAGGGATCGAAGACGTTGCTCCGGCGC
CCACCAAAAATGCTTGGAATCAACGCCATCGTCGTTGTTGGTGAATTAGATAGTAGAATCGCTGAAAGTGATACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCAATGCTCCTGACTTCTGGCTTCTTCACTTCCATTTTGGGCACCGTCACCGTCAGCACCCCATTCTCCATGTTGGCCTTCACCTCTTCTACTTTCGCATTCTCCGG
CAGCCTGAATCTCCTCATGAACTTCCCACTGCTTCTTTCAATTCTATGCCACTTGTCATCCGCCTTCAACACGTGGGCTTCTGGGGTCTCCTTCCAGTCGATGCGGGTGT
TGGCAAAAGCAGAGGAGGAGGGGACGTTGGCCAGAGAGCTTGAAAATGGTAAGCCTTCGAAAGGATCCCAAACGTCTAAGGAGAAGGGATCGAAGACGTTGCTCCGGCGC
CCACCAAAAATGCTTGGAATCAACGCCATCGTCGTTGTTGGTGAATTAGATAGTAGAATCGCTGAAAGTGATACTTGA
Protein sequenceShow/hide protein sequence
MSMLLTSGFFTSILGTVTVSTPFSMLAFTSSTFAFSGSLNLLMNFPLLLSILCHLSSAFNTWASGVSFQSMRVLAKAEEEGTLARELENGKPSKGSQTSKEKGSKTLLRR
PPKMLGINAIVVVGELDSRIAESDT