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CmoCh04G012530 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G012530
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionAP-3 complex subunit beta-A
Genome locationCmo_Chr04:6352567..6354834
RNA-Seq ExpressionCmoCh04G012530
SyntenyCmoCh04G012530
Gene Ontology termsGO:0006810 - transport (biological process)
GO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GEY93846.1 AP-3 complex subunit beta-A [Tanacetum cinerariifolium]2.1e-1460.98Show/hide
Query:  PNTVSSQFTFTVTCRGSKHFPSTVSETKHGNELLRISALNRRHKPVASSRKLATGSSMDTRKTFALPSIFNAKLLHMRRNLS
        P TVSSQ  FT   RGSKH PS+V++ + GN LLRIS LNR+HKP AS R  +TG   DTR  FAL SIF+AKL H+ RN S
Subjt:  PNTVSSQFTFTVTCRGSKHFPSTVSETKHGNELLRISALNRRHKPVASSRKLATGSSMDTRKTFALPSIFNAKLLHMRRNLS

TrEMBL top hitse value%identityAlignment
A0A0A9EVR5 Uncharacterized protein5.7e-0549.28Show/hide
Query:  TILFNKFNPNTVSSQFTFTVTCRGSKHFPSTVSETKHGNELLRISALNRRHKPVASSRKLATGSSMDTR
        T LF +F  NTVSS+FT  V   G    PS     + G E+LRIS LN +HKP ASS    TG S+ TR
Subjt:  TILFNKFNPNTVSSQFTFTVTCRGSKHFPSTVSETKHGNELLRISALNRRHKPVASSRKLATGSSMDTR

A0A0A9IZ11 Uncharacterized protein3.3e-0547.83Show/hide
Query:  TILFNKFNPNTVSSQFTFTVTCRGSKHFPSTVSETKHGNELLRISALNRRHKPVASSRKLATGSSMDTR
        T LF +F  NTVSS+FT  V   G    PS     + G E+LRIS LN +HKP  SS    TG S++TR
Subjt:  TILFNKFNPNTVSSQFTFTVTCRGSKHFPSTVSETKHGNELLRISALNRRHKPVASSRKLATGSSMDTR

A0A699I0H0 AP-3 complex subunit beta-A (Fragment)1.0e-1460.98Show/hide
Query:  PNTVSSQFTFTVTCRGSKHFPSTVSETKHGNELLRISALNRRHKPVASSRKLATGSSMDTRKTFALPSIFNAKLLHMRRNLS
        P TVSSQ  FT   RGSKH PS+V++ + GN LLRIS LNR+HKP AS R  +TG   DTR  FAL SIF+AKL H+ RN S
Subjt:  PNTVSSQFTFTVTCRGSKHFPSTVSETKHGNELLRISALNRRHKPVASSRKLATGSSMDTRKTFALPSIFNAKLLHMRRNLS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACATGAAACAGCACAAAATTTGATAAACAAAGAACTGACAGTTACCTTTTACTGGTTGGGGTTGGGGACAGAGGGGTTGCCTAAGAATTTCACTATCCTGTTCAA
CAAATTCAACCCAAATACAGTTTCTTCACAGTTTACTTTCACAGTTACATGTAGGGGTTCTAAGCATTTTCCTTCAACAGTCAGCGAGACCAAGCACGGGAATGAGTTGC
TCAGAATCTCGGCGCTGAACCGTAGGCACAAACCGGTTGCGTCGTCGAGAAAGTTAGCAACTGGGAGTTCCATGGATACTAGGAAAACGTTTGCATTGCCGAGCATCTTC
AATGCCAAGCTCTTGCATATGCGAAGAAATTTATCTTCTTCTATTGGTCTCTCACTCTTTTCATCGTTAAGCTTCCCAAGGTGGTCAGTGAATGTGCATCTAAAGGACAC
AATACAGCCGATTGTCCTCCAAAAATGCGTTCTGCAAGTTTCCATGACCGATCTCTTGGTTTGGATCGACTCTCTTCAGGAACTTCCATATCCAAATGGGATGACAGGAG
CTTTTGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAACATGAAACAGCACAAAATTTGATAAACAAAGAACTGACAGTTACCTTTTACTGGTTGGGGTTGGGGACAGAGGGGTTGCCTAAGAATTTCACTATCCTGTTCAA
CAAATTCAACCCAAATACAGTTTCTTCACAGTTTACTTTCACAGTTACATGTAGGGGTTCTAAGCATTTTCCTTCAACAGTCAGCGAGACCAAGCACGGGAATGAGTTGC
TCAGAATCTCGGCGCTGAACCGTAGGCACAAACCGGTTGCGTCGTCGAGAAAGTTAGCAACTGGGAGTTCCATGGATACTAGGAAAACGTTTGCATTGCCGAGCATCTTC
AATGCCAAGCTCTTGCATATGCGAAGAAATTTATCTTCTTCTATTGGTCTCTCACTCTTTTCATCGTTAAGCTTCCCAAGGTGGTCAGTGAATGTGCATCTAAAGGACAC
AATACAGCCGATTGTCCTCCAAAAATGCGTTCTGCAAGTTTCCATGACCGATCTCTTGGTTTGGATCGACTCTCTTCAGGAACTTCCATATCCAAATGGGATGACAGGAG
CTTTTGAATAA
Protein sequenceShow/hide protein sequence
MKHETAQNLINKELTVTFYWLGLGTEGLPKNFTILFNKFNPNTVSSQFTFTVTCRGSKHFPSTVSETKHGNELLRISALNRRHKPVASSRKLATGSSMDTRKTFALPSIF
NAKLLHMRRNLSSSIGLSLFSSLSFPRWSVNVHLKDTIQPIVLQKCVLQVSMTDLLVWIDSLQELPYPNGMTGAFE