; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G012690 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G012690
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionserine/arginine-rich SC35-like splicing factor SCL30
Genome locationCmo_Chr04:6429554..6434008
RNA-Seq ExpressionCmoCh04G012690
SyntenyCmoCh04G012690
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601004.1 Serine/arginine-rich SC35-like splicing factor SCL30, partial [Cucurbita argyrosperma subsp. sororia]5.3e-12181.57Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGY---GGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPY
        MRRYSPPYHSPPRRGYGGRGRSPPGRGY   GGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPY
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGY---GGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPY

Query:  EASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRRDHQTMVDAVLIMGVLDL----VQYPDHAPPVILQVQEVDTDQVNMPHGIVRSYSPAPRWRGD
        EASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQR             G  D       Y       + + +       +      RSYSPAPRWRGD
Subjt:  EASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRRDHQTMVDAVLIMGVLDL----VQYPDHAPPVILQVQEVDTDQVNMPHGIVRSYSPAPRWRGD

Query:  YSVSPSRRHADYPRSPRGAARERDGERNRQVYSPGYDNADGPDVD--GNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRH
        YSVSPSRRHADYPRSPRGAARERDGER+RQVYSPGYDNADGPDVD  GNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRH
Subjt:  YSVSPSRRHADYPRSPRGAARERDGERNRQVYSPGYDNADGPDVD--GNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRH

KAG7031619.1 Serine/arginine-rich SC35-like splicing factor SCL30, partial [Cucurbita argyrosperma subsp. argyrosperma]9.6e-12382.41Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEAS
        MRRYSPPYHSPPRRGYGGRGRSPPGRGY  GGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEAS
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEAS

Query:  EAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRRDHQTMVDAVLIMGVLDL----VQYPDHAPPVILQVQEVDTDQVNMPHGIVRSYSPAPRWRGDYSV
        EAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQR             G  D       Y       + + +       +      RSYSPAPRWRGDYSV
Subjt:  EAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRRDHQTMVDAVLIMGVLDL----VQYPDHAPPVILQVQEVDTDQVNMPHGIVRSYSPAPRWRGDYSV

Query:  SPSRRHADYPRSPRGAARERDGERNRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR
        SPSRRHADYPRSPRGAARERDGER+RQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR
Subjt:  SPSRRHADYPRSPRGAARERDGERNRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR

XP_022957588.1 serine/arginine-rich SC35-like splicing factor SCL30 [Cucurbita moschata]9.3e-12683.45Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEAS
        MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEAS
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEAS

Query:  EAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRRDHQTMVDAVLIMGVLDL----VQYPDHAPPVILQVQEVDTDQVNMPHGIVRSYSPAPRWRGDYSV
        EAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQR             G  D       Y       + + +       +      RSYSPAPRWRGDYSV
Subjt:  EAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRRDHQTMVDAVLIMGVLDL----VQYPDHAPPVILQVQEVDTDQVNMPHGIVRSYSPAPRWRGDYSV

Query:  SPSRRHADYPRSPRGAARERDGERNRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR
        SPSRRHADYPRSPRGAARERDGERNRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR
Subjt:  SPSRRHADYPRSPRGAARERDGERNRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR

XP_022987464.1 serine/arginine-rich SC35-like splicing factor SCL30 [Cucurbita maxima]2.5e-12381.69Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGY-----GGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVD
        MRRYSPPYHSPPRRGYGGRGRSPPGRGY     GGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVD
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGY-----GGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVD

Query:  PYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRRDHQTMVDAVLIMGVLDL----VQYPDHAPPVILQVQEVDTDQVNMPHGIVRSYSPAPRWR
        PYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQR             G  D       Y       + + +       +      RSYSPAPRWR
Subjt:  PYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRRDHQTMVDAVLIMGVLDL----VQYPDHAPPVILQVQEVDTDQVNMPHGIVRSYSPAPRWR

Query:  GDYSVSPSRRHADYPRSPRGAARERDGERNRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR
        GDYSVSPSRRHADYPRSPRGAARERDGER+RQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR
Subjt:  GDYSVSPSRRHADYPRSPRGAARERDGERNRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR

XP_023549438.1 serine/arginine-rich SC35-like splicing factor SCL30 [Cucurbita pepo subsp. pepo]3.7e-12281.97Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGY--GGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYE
        MRRYSPPYHSPPRRGYGGRGRSPPGRGY  GGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYE
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGY--GGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYE

Query:  ASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRRDHQTMVDAVLIMGVLDL----VQYPDHAPPVILQVQEVDTDQVNMPHGIVRSYSPAPRWRGDY
        ASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQR             G  D       Y       + + +       +      RSYSPAPRWRGDY
Subjt:  ASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRRDHQTMVDAVLIMGVLDL----VQYPDHAPPVILQVQEVDTDQVNMPHGIVRSYSPAPRWRGDY

Query:  SVSPSRRHADYPRSPRGAARERDGERNRQVYSPGYDNADGPDVD--GNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR
        SVSPSRRHADYPRSPRGAARERDGER+RQVYSPGYDNADGPDVD  GNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR
Subjt:  SVSPSRRHADYPRSPRGAARERDGERNRQVYSPGYDNADGPDVD--GNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR

TrEMBL top hitse value%identityAlignment
A0A1S3CFP8 serine/arginine-rich SC35-like splicing factor SCL301.4e-11175.25Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGY--GGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYE
        MRRYSPPYHSPPRRGYGGRGRSPPGRGY  GGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTG+PRGFAFVEFVDPYE
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGY--GGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYE

Query:  ASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQ-----------RRDHQTMVDAVLIMGVLDLVQYPDHAPPVILQVQEVDTDQVNMPHGIVRSYSPA
        ASEAQYHMNGKKFAGREI VVLAAESRKRPEQMRQ           RR H                 Y       + + +       +      RSYSPA
Subjt:  ASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQ-----------RRDHQTMVDAVLIMGVLDLVQYPDHAPPVILQVQEVDTDQVNMPHGIVRSYSPA

Query:  PRWRGDYSVSPSRRHADYPRSPRGAARERDGERNRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR
        PRWRGDYSVSP RRHADYP SPRGA RERD ER+RQVYSPGYDNAD  + D NGNGYHDK  FEGEDAR NWR SP RTSRSPSGSRSRSADASPRHGR
Subjt:  PRWRGDYSVSPSRRHADYPRSPRGAARERDGERNRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR

A0A6J1FWZ5 serine/arginine-rich SC35-like splicing factor SCL307.0e-11177.62Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEAS
        MRRYSPPYHSPPRRGYGGRGRSPPGRGY GGGGGGYGR+REQ HGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTG PRGFAFVEFVDPYEAS
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEAS

Query:  EAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRRDHQTMVDAVLIMGVLDLVQYPDHAPPVILQVQEVDTDQVNMPHGIVRSYSPAPRWRGDYSVSPSR
        EAQYHMNGKKFAGREI VVLAAESRKRPEQMRQR             G      Y   +    +                 RSYSPAPRWRG+YS+SP R
Subjt:  EAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRRDHQTMVDAVLIMGVLDLVQYPDHAPPVILQVQEVDTDQVNMPHGIVRSYSPAPRWRGDYSVSPSR

Query:  RHADYPRSPRGAARERDGERNRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR
        RHADYPRSPRGA RERDGER+ QVYSPGYDNA G D D  GNGYHDKPAFEGEDARA+WR SP RTSRSPSGSRSRSADASPRHGR
Subjt:  RHADYPRSPRGAARERDGERNRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR

A0A6J1H0N2 serine/arginine-rich SC35-like splicing factor SCL304.5e-12683.45Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEAS
        MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEAS
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEAS

Query:  EAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRRDHQTMVDAVLIMGVLDL----VQYPDHAPPVILQVQEVDTDQVNMPHGIVRSYSPAPRWRGDYSV
        EAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQR             G  D       Y       + + +       +      RSYSPAPRWRGDYSV
Subjt:  EAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRRDHQTMVDAVLIMGVLDL----VQYPDHAPPVILQVQEVDTDQVNMPHGIVRSYSPAPRWRGDYSV

Query:  SPSRRHADYPRSPRGAARERDGERNRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR
        SPSRRHADYPRSPRGAARERDGERNRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR
Subjt:  SPSRRHADYPRSPRGAARERDGERNRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR

A0A6J1JHD1 serine/arginine-rich SC35-like splicing factor SCL302.6e-11076.92Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEAS
        MRRYSPPYHSPPRRGYGGRGRSPPGRGY GGGGGGY RRRE  HGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTG PRGFAFVEFVDPYEAS
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEAS

Query:  EAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRRDHQTMVDAVLIMGVLDLVQYPDHAPPVILQVQEVDTDQVNMPHGIVRSYSPAPRWRGDYSVSPSR
        EAQYHMNGKKFAGREI VVLAAESRKRPEQMRQR             G      Y   +    +                 RSYSPAPRWRG+YS+SP R
Subjt:  EAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRRDHQTMVDAVLIMGVLDLVQYPDHAPPVILQVQEVDTDQVNMPHGIVRSYSPAPRWRGDYSVSPSR

Query:  RHADYPRSPRGAARERDGERNRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR
        RHADYPRSPR   RERDGER+RQVYSPGYDNA   D DGNGNGYHDKPAFEG DARA+WR SP RTSRSPSGSRSRSADASPRHGR
Subjt:  RHADYPRSPRGAARERDGERNRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR

A0A6J1JIZ1 serine/arginine-rich SC35-like splicing factor SCL301.2e-12381.69Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGY-----GGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVD
        MRRYSPPYHSPPRRGYGGRGRSPPGRGY     GGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVD
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGY-----GGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVD

Query:  PYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRRDHQTMVDAVLIMGVLDL----VQYPDHAPPVILQVQEVDTDQVNMPHGIVRSYSPAPRWR
        PYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQR             G  D       Y       + + +       +      RSYSPAPRWR
Subjt:  PYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRRDHQTMVDAVLIMGVLDL----VQYPDHAPPVILQVQEVDTDQVNMPHGIVRSYSPAPRWR

Query:  GDYSVSPSRRHADYPRSPRGAARERDGERNRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR
        GDYSVSPSRRHADYPRSPRGAARERDGER+RQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR
Subjt:  GDYSVSPSRRHADYPRSPRGAARERDGERNRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR

SwissProt top hitse value%identityAlignment
Q1PDV2 Serine/arginine-rich SC35-like splicing factor SCL281.2e-1944.53Show/hide
Query:  RRYS--PPYHSPP--RRGYGGR--GRSPPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVD
        R YS  P   SPP  R+GY        P  R +   G  G           LL+RN+P+D RP +LR  FERFG ++D+Y+P++YYTG+PRGF FV++  
Subjt:  RRYS--PPYHSPP--RRGYGGR--GRSPPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVD

Query:  PYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMR
          +A+EA   MN K   GREIA+V A E+RK P++MR
Subjt:  PYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMR

Q8L3X8 Serine/arginine-rich SC35-like splicing factor SCL302.6e-6254.83Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRS----PPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDP
        MRRYSPPY+SPPRRGYGGRGRS    PP RGYGGGGGG  G RR   HGSLLVRNIP+DCRPEELR PFERFG VRDVYIP+DYY+GQPRGFAFVEFVD 
Subjt:  MRRYSPPYHSPPRRGYGGRGRS----PPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDP

Query:  YEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRRDHQTMVDAVLIMGVLDLVQYPDHAPPVILQVQEVDTDQVNMPHGIVRSYSPAPRWRGDYSV
        Y+A EAQ  MN + FAGREI VV+A+ESRKRPE+MR +   ++   +    G  D   +       I + +       +      RSYSPAPR RG    
Subjt:  YEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRRDHQTMVDAVLIMGVLDLVQYPDHAPPVILQVQEVDTDQVNMPHGIVRSYSPAPRWRGDYSV

Query:  SPSRRHADYPRSPRGAARERDGERNRQVYSPGYDN--ADGPDVDGNG-NGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPR
                    PRG   E D   +R+ YSPGY+   A  PD D NG N   +KP +E ED R   R      SRSPSGSRSRS + SPR
Subjt:  SPSRRHADYPRSPRGAARERDGERNRQVYSPGYDN--ADGPDVDGNG-NGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPR

Q8WXF0 Serine/arginine-rich splicing factor 121.3e-1845Show/hide
Query:  RRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRRDH
        R    P+ SL +RN+    RPE+LR  F R+G + DVYIP D+YT +PRGFA+V+F D  +A +A Y++N K   GR+I +  A   RK P QM+ +  H
Subjt:  RRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRRDH

Q9LHP2 Serine/arginine-rich SC35-like splicing factor SCL30A2.9e-2954.14Show/hide
Query:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEASE
        R Y+P   SPP RGYG RGRSP  RG  GG       R      SLLVRN+  DCR E+LR PFE+FG V+D+Y+P+DYYTG PRGF F++F+DP +A+E
Subjt:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEASE

Query:  AQYHMNGKKFAGREIAVVLAAESRKRPEQMRQR
        A++ M+G    GRE+ VV A E+RK+P +MR R
Subjt:  AQYHMNGKKFAGREIAVVLAAESRKRPEQMRQR

Q9SEU4 Serine/arginine-rich SC35-like splicing factor SCL332.9e-2940.21Show/hide
Query:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEASE
        R Y+P   SPP RGYG RGRSP  RG  G      GR R+ P  SLLVRN+  DCR E+LR  FE+FG V+D+Y+P+DYYTG PRGF FV+F+DP +A++
Subjt:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEASE

Query:  AQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRRDHQTMVDAVLIMGVLDLVQYPDHAPPVILQVQEVDTDQVNMPHGIVRSYSPAPR------WRGDYS
        A++HM+G    GRE+ VV A E+RK+P +MR R                   ++ D               +   P    RS SP PR        GDY 
Subjt:  AQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRRDHQTMVDAVLIMGVLDLVQYPDHAPPVILQVQEVDTDQVNMPHGIVRSYSPAPR------WRGDYS

Query:  VSPSRRHADYPRSPRGAARERDGERNRQVYSPGYDNADG---PDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPR
          P RRH  +PRS        DG R+    SP  D + G     V G        P       R +   SP R SRSPS  R+RS   SPR
Subjt:  VSPSRRHADYPRSPRGAARERDGERNRQVYSPGYDNADG---PDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPR

Arabidopsis top hitse value%identityAlignment
AT1G55310.1 SC35-like splicing factor 332.1e-3040.21Show/hide
Query:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEASE
        R Y+P   SPP RGYG RGRSP  RG  G      GR R+ P  SLLVRN+  DCR E+LR  FE+FG V+D+Y+P+DYYTG PRGF FV+F+DP +A++
Subjt:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEASE

Query:  AQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRRDHQTMVDAVLIMGVLDLVQYPDHAPPVILQVQEVDTDQVNMPHGIVRSYSPAPR------WRGDYS
        A++HM+G    GRE+ VV A E+RK+P +MR R                   ++ D               +   P    RS SP PR        GDY 
Subjt:  AQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRRDHQTMVDAVLIMGVLDLVQYPDHAPPVILQVQEVDTDQVNMPHGIVRSYSPAPR------WRGDYS

Query:  VSPSRRHADYPRSPRGAARERDGERNRQVYSPGYDNADG---PDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPR
          P RRH  +PRS        DG R+    SP  D + G     V G        P       R +   SP R SRSPS  R+RS   SPR
Subjt:  VSPSRRHADYPRSPRGAARERDGERNRQVYSPGYDNADG---PDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPR

AT1G55310.2 SC35-like splicing factor 331.2e-3041.42Show/hide
Query:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEASE
        R Y+P   SPP RGYG RGRSP  RG  G      GR R+ P  SLLVRN+  DCR E+LR  FE+FG V+D+Y+P+DYYTG PRGF FV+F+DP +A++
Subjt:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEASE

Query:  AQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRRDHQTMVDAVLIMGVLDLVQYPDHAPPVILQVQEVDTDQVNMPHGIVRSYSPAPR------WRGDYS
        A++HM+G    GRE+ VV A E+RK+P +MR R                   ++ D               +   P    RS SP PR        GDY 
Subjt:  AQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRRDHQTMVDAVLIMGVLDLVQYPDHAPPVILQVQEVDTDQVNMPHGIVRSYSPAPR------WRGDYS

Query:  VSPSRRHADYPRSPRGAARERDGERNRQVYSPGYDNADG
          P RRH  +PRS        DG R+    SP  D + G
Subjt:  VSPSRRHADYPRSPRGAARERDGERNRQVYSPGYDNADG

AT1G55310.3 SC35-like splicing factor 331.2e-2738.94Show/hide
Query:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTG------------QPRGFA
        R Y+P   SPP RGYG RGRSP  RG  G      GR R+ P  SLLVRN+  DCR E+LR  FE+FG V+D+Y+P+DYYTG             PRGF 
Subjt:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTG------------QPRGFA

Query:  FVEFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRRDHQTMVDAVLIMGVLDLVQYPDHAPPVILQVQEVDTDQVNMPHGIVRSYSPAPR
        FV+F+DP +A++A++HM+G    GRE+ VV A E+RK+P +MR R             G     +     PP                    RS SP PR
Subjt:  FVEFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRRDHQTMVDAVLIMGVLDLVQYPDHAPPVILQVQEVDTDQVNMPHGIVRSYSPAPR

Query:  ------WRGDYSVSPSRRHADYPRSPRGAARERDGERNRQVYSPGYDNADG---PDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADA
                GDY   P RRH  +PRS        DG R+    SP  D + G     V G        P       R +   SP R SRSPS  R+RS   
Subjt:  ------WRGDYSVSPSRRHADYPRSPRGAARERDGERNRQVYSPGYDNADG---PDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADA

Query:  SPR
        SPR
Subjt:  SPR

AT3G13570.1 SC35-like splicing factor 30A2.1e-3054.14Show/hide
Query:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEASE
        R Y+P   SPP RGYG RGRSP  RG  GG       R      SLLVRN+  DCR E+LR PFE+FG V+D+Y+P+DYYTG PRGF F++F+DP +A+E
Subjt:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEASE

Query:  AQYHMNGKKFAGREIAVVLAAESRKRPEQMRQR
        A++ M+G    GRE+ VV A E+RK+P +MR R
Subjt:  AQYHMNGKKFAGREIAVVLAAESRKRPEQMRQR

AT3G55460.1 SC35-like splicing factor 301.8e-6354.83Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRS----PPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDP
        MRRYSPPY+SPPRRGYGGRGRS    PP RGYGGGGGG  G RR   HGSLLVRNIP+DCRPEELR PFERFG VRDVYIP+DYY+GQPRGFAFVEFVD 
Subjt:  MRRYSPPYHSPPRRGYGGRGRS----PPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDP

Query:  YEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRRDHQTMVDAVLIMGVLDLVQYPDHAPPVILQVQEVDTDQVNMPHGIVRSYSPAPRWRGDYSV
        Y+A EAQ  MN + FAGREI VV+A+ESRKRPE+MR +   ++   +    G  D   +       I + +       +      RSYSPAPR RG    
Subjt:  YEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRRDHQTMVDAVLIMGVLDLVQYPDHAPPVILQVQEVDTDQVNMPHGIVRSYSPAPRWRGDYSV

Query:  SPSRRHADYPRSPRGAARERDGERNRQVYSPGYDN--ADGPDVDGNG-NGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPR
                    PRG   E D   +R+ YSPGY+   A  PD D NG N   +KP +E ED R   R      SRSPSGSRSRS + SPR
Subjt:  SPSRRHADYPRSPRGAARERDGERNRQVYSPGYDN--ADGPDVDGNG-NGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAGATACAGTCCACCATATCATAGCCCTCCAAGAAGAGGATATGGTGGTCGTGGAAGAAGCCCCCCAGGAAGGGGTTATGGTGGTGGTGGTGGTGGTGGGTATGG
AAGACGAAGGGAACAGCCTCATGGTAGCCTTTTGGTTAGAAATATTCCTATGGATTGCAGGCCAGAGGAGCTTAGAGCGCCATTTGAGAGGTTTGGACTTGTTCGCGATG
TGTATATTCCAAAGGACTATTACACAGGTCAGCCTCGAGGATTTGCATTTGTGGAGTTTGTTGATCCTTACGAGGCTTCGGAAGCTCAGTACCATATGAATGGGAAGAAA
TTTGCTGGTAGGGAGATTGCTGTGGTCCTTGCTGCAGAATCAAGGAAGAGGCCAGAACAGATGCGCCAAAGGAGGGACCATCAGACTATGGTGGACGCCGTTCTTATTAT
GGGCGTTCTAGATCTCGTTCAGTATCCAGATCACGCTCCCCCCGTCATCCTTCAGGTTCAAGAAGTAGACACCGATCAAGTAAATATGCCACATGGAATTGTCAGATCCT
ATTCTCCTGCTCCAAGATGGCGAGGCGACTATTCTGTTTCCCCTAGTAGAAGGCATGCAGATTACCCCAGATCGCCAAGAGGTGCTGCTCGTGAGCGAGATGGTGAGAGG
AATCGACAAGTATATTCTCCAGGTTATGATAATGCTGATGGTCCTGATGTCGATGGGAATGGAAATGGATATCATGACAAGCCTGCATTTGAAGGGGAGGATGCACGAGC
TAATTGGAGGCCTTCTCCTGATAGAACATCAAGATCACCTTCGGGGTCTCGATCCCGCTCTGCTGATGCGTCCCCAAGACACGGTAGATGA
mRNA sequenceShow/hide mRNA sequence
CAGTTATAAAATTCTAAACCCTACCGCAGTAGTTTTCTTGCTCAGGAGTATCAGGAATCAGATCGAGGGAAAATTCTCTCTGCGCATTTTCTTGTCTTCCCGCTCTTTTC
TTCAGGTCGAAACATGAGAAGATACAGTCCACCATATCATAGCCCTCCAAGAAGAGGATATGGTGGTCGTGGAAGAAGCCCCCCAGGAAGGGGTTATGGTGGTGGTGGTG
GTGGTGGGTATGGAAGACGAAGGGAACAGCCTCATGGTAGCCTTTTGGTTAGAAATATTCCTATGGATTGCAGGCCAGAGGAGCTTAGAGCGCCATTTGAGAGGTTTGGA
CTTGTTCGCGATGTGTATATTCCAAAGGACTATTACACAGGTCAGCCTCGAGGATTTGCATTTGTGGAGTTTGTTGATCCTTACGAGGCTTCGGAAGCTCAGTACCATAT
GAATGGGAAGAAATTTGCTGGTAGGGAGATTGCTGTGGTCCTTGCTGCAGAATCAAGGAAGAGGCCAGAACAGATGCGCCAAAGGAGGGACCATCAGACTATGGTGGACG
CCGTTCTTATTATGGGCGTTCTAGATCTCGTTCAGTATCCAGATCACGCTCCCCCCGTCATCCTTCAGGTTCAAGAAGTAGACACCGATCAAGTAAATATGCCACATGGA
ATTGTCAGATCCTATTCTCCTGCTCCAAGATGGCGAGGCGACTATTCTGTTTCCCCTAGTAGAAGGCATGCAGATTACCCCAGATCGCCAAGAGGTGCTGCTCGTGAGCG
AGATGGTGAGAGGAATCGACAAGTATATTCTCCAGGTTATGATAATGCTGATGGTCCTGATGTCGATGGGAATGGAAATGGATATCATGACAAGCCTGCATTTGAAGGGG
AGGATGCACGAGCTAATTGGAGGCCTTCTCCTGATAGAACATCAAGATCACCTTCGGGGTCTCGATCCCGCTCTGCTGATGCGTCCCCAAGACACGGTAGATGATGTGAA
ACTATGGTTTCTAAAATCTAACATTTGTTACTCTGAAGTTAGTATCCACTATCCGTTTTAAGATTGTATTTTGTATGATGTTGTTAGCGATCGGATTTTCCAGACAGGCA
AATTGGTTTGCTCATATTTGAAGCTTAAAATTATTATGGTAGGCCACCAAACCTCTTGCTACTTTTCTTGATTGTCAATGCTCTTCTTCCTCATATATCTATCTCATTTA
GCATCATCGACGATACTGTCACCCTTCTCATTCATCTCTTTGTTCTTCACTAG
Protein sequenceShow/hide protein sequence
MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEASEAQYHMNGKK
FAGREIAVVLAAESRKRPEQMRQRRDHQTMVDAVLIMGVLDLVQYPDHAPPVILQVQEVDTDQVNMPHGIVRSYSPAPRWRGDYSVSPSRRHADYPRSPRGAARERDGER
NRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR