; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G013080 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G013080
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionelongator complex protein 6
Genome locationCmo_Chr04:6646523..6650796
RNA-Seq ExpressionCmoCh04G013080
SyntenyCmoCh04G013080
Gene Ontology termsGO:0002098 - tRNA wobble uridine modification (biological process)
GO:0009653 - anatomical structure morphogenesis (biological process)
GO:0048731 - system development (biological process)
GO:0050789 - regulation of biological process (biological process)
GO:0033588 - Elongator holoenzyme complex (cellular component)
InterPro domainsIPR018627 - Elongator complex protein 6
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601039.1 Elongator complex protein 6, partial [Cucurbita argyrosperma subsp. sororia]9.4e-15692.01Show/hide
Query:  MSRMTSNLLDEAIGIDDSTNLSPLVGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAVIFVAFSQSFVHYDRVLRKLGCNLAAQRDSHRFFFLDMLTV
        MSRMTSNLLDEAIGIDDSTNLSPLVGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAVIFVAFSQSFVHYDRVLRKLGCNLAAQRDSHRFFFLDMLTV
Subjt:  MSRMTSNLLDEAIGIDDSTNLSPLVGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAVIFVAFSQSFVHYDRVLRKLGCNLAAQRDSHRFFFLDMLTV

Query:  GCSDRSGKETDEGVLVGLYCKIQRAVSALIQENKRHVTILIDDIPLLEVAANGSSNHVLDFLHYCHTLTSEIGCSIIALSHEDVYLDIERPLILQMEYLA
        GCSDRSGKETDEGVLVGLYCKIQRAVSALIQENK HVTI+IDDIPLLEVAANGSSNHVLDFLHYCHTLTSEIGCSIIALSHEDVYLDIERPLILQMEYLA
Subjt:  GCSDRSGKETDEGVLVGLYCKIQRAVSALIQENKRHVTILIDDIPLLEVAANGSSNHVLDFLHYCHTLTSEIGCSIIALSHEDVYLDIERPLILQMEYLA

Query:  EILIKVGPLATGIAKDVHGQLTVLNKPVGGLQENLRNRVHNFQFYIKENDRFDNYTFLCCTILALNPVKLPDFEHLLILFVMQLERRSIEVSTDSIDSLL
        ++LIKVGPLATGIAKDVHGQLTVLNKPVGGLQENLRNRVHNFQFYIKEN                  VKLPDFEHLLILFVMQLERRSIE+ TDSIDSLL
Subjt:  EILIKVGPLATGIAKDVHGQLTVLNKPVGGLQENLRNRVHNFQFYIKENDRFDNYTFLCCTILALNPVKLPDFEHLLILFVMQLERRSIEVSTDSIDSLL

Query:  YSRFVLCETCLFI
        YSRFVLCET LFI
Subjt:  YSRFVLCETCLFI

XP_022957322.1 elongator complex protein 6 isoform X1 [Cucurbita moschata]1.7e-136100Show/hide
Query:  MSRMTSNLLDEAIGIDDSTNLSPLVGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAVIFVAFSQSFVHYDRVLRKLGCNLAAQRDSHRFFFLDMLTV
        MSRMTSNLLDEAIGIDDSTNLSPLVGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAVIFVAFSQSFVHYDRVLRKLGCNLAAQRDSHRFFFLDMLTV
Subjt:  MSRMTSNLLDEAIGIDDSTNLSPLVGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAVIFVAFSQSFVHYDRVLRKLGCNLAAQRDSHRFFFLDMLTV

Query:  GCSDRSGKETDEGVLVGLYCKIQRAVSALIQENKRHVTILIDDIPLLEVAANGSSNHVLDFLHYCHTLTSEIGCSIIALSHEDVYLDIERPLILQMEYLA
        GCSDRSGKETDEGVLVGLYCKIQRAVSALIQENKRHVTILIDDIPLLEVAANGSSNHVLDFLHYCHTLTSEIGCSIIALSHEDVYLDIERPLILQMEYLA
Subjt:  GCSDRSGKETDEGVLVGLYCKIQRAVSALIQENKRHVTILIDDIPLLEVAANGSSNHVLDFLHYCHTLTSEIGCSIIALSHEDVYLDIERPLILQMEYLA

Query:  EILIKVGPLATGIAKDVHGQLTVLNKPVGGLQENLRNRVHNFQFYIKEN
        EILIKVGPLATGIAKDVHGQLTVLNKPVGGLQENLRNRVHNFQFYIKEN
Subjt:  EILIKVGPLATGIAKDVHGQLTVLNKPVGGLQENLRNRVHNFQFYIKEN

XP_022957323.1 elongator complex protein 6 isoform X2 [Cucurbita moschata]9.8e-13799.21Show/hide
Query:  MSRMTSNLLDEAIGIDDSTNLSPLVGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAVIFVAFSQSFVHYDRVLRKLGCNLAAQRDSHRFFFLDMLTV
        MSRMTSNLLDEAIGIDDSTNLSPLVGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAVIFVAFSQSFVHYDRVLRKLGCNLAAQRDSHRFFFLDMLTV
Subjt:  MSRMTSNLLDEAIGIDDSTNLSPLVGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAVIFVAFSQSFVHYDRVLRKLGCNLAAQRDSHRFFFLDMLTV

Query:  GCSDRSGKETDEGVLVGLYCKIQRAVSALIQENKRHVTILIDDIPLLEVAANGSSNHVLDFLHYCHTLTSEIGCSIIALSHEDVYLDIERPLILQMEYLA
        GCSDRSGKETDEGVLVGLYCKIQRAVSALIQENKRHVTILIDDIPLLEVAANGSSNHVLDFLHYCHTLTSEIGCSIIALSHEDVYLDIERPLILQMEYLA
Subjt:  GCSDRSGKETDEGVLVGLYCKIQRAVSALIQENKRHVTILIDDIPLLEVAANGSSNHVLDFLHYCHTLTSEIGCSIIALSHEDVYLDIERPLILQMEYLA

Query:  EILIKVGPLATGIAKDVHGQLTVLNKPVGGLQENLRNRVHNFQFYIKENDRF
        EILIKVGPLATGIAKDVHGQLTVLNKPVGGLQENLRNRVHNFQFYIKEN  F
Subjt:  EILIKVGPLATGIAKDVHGQLTVLNKPVGGLQENLRNRVHNFQFYIKENDRF

XP_023533346.1 elongator complex protein 6 isoform X1 [Cucurbita pepo subsp. pepo]5.9e-13497.19Show/hide
Query:  MSRMTSNLLDEAIGIDDSTNLSPLVGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAVIFVAFSQSFVHYDRVLRKLGCNLAAQRDSHRFFFLDMLTV
        MSRMTSNLLDEAIG+DDST+LSPLVGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAVIF+AFSQSFVHYDRVLRKLGCNLAAQRDSHRFFFLDMLTV
Subjt:  MSRMTSNLLDEAIGIDDSTNLSPLVGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAVIFVAFSQSFVHYDRVLRKLGCNLAAQRDSHRFFFLDMLTV

Query:  GCSDRSGKETDEGVLVGLYCKIQRAVSALIQENKRHVTILIDDIPLLEVAANGSSNHVLDFLHYCHTLTSEIGCSIIALSHEDVYLDIERPLILQMEYLA
        GCSDRSGKET EGVLVGLYCKIQRAVSALIQENKRHVTI+IDDIPLLEVAANGSSNHVLDFLHYCHTLTSEIGCSIIALSHEDVYLDIERPLILQMEYLA
Subjt:  GCSDRSGKETDEGVLVGLYCKIQRAVSALIQENKRHVTILIDDIPLLEVAANGSSNHVLDFLHYCHTLTSEIGCSIIALSHEDVYLDIERPLILQMEYLA

Query:  EILIKVGPLATGIAKDVHGQLTVLNKPVGGLQENLRNRVHNFQFYIKEN
        ++LIKVGPLATGIAKDVHGQLTVLNKPVGGLQENLRNRVHNFQFYIKEN
Subjt:  EILIKVGPLATGIAKDVHGQLTVLNKPVGGLQENLRNRVHNFQFYIKEN

XP_023533354.1 elongator complex protein 6 isoform X2 [Cucurbita pepo subsp. pepo]3.5e-13496.43Show/hide
Query:  MSRMTSNLLDEAIGIDDSTNLSPLVGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAVIFVAFSQSFVHYDRVLRKLGCNLAAQRDSHRFFFLDMLTV
        MSRMTSNLLDEAIG+DDST+LSPLVGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAVIF+AFSQSFVHYDRVLRKLGCNLAAQRDSHRFFFLDMLTV
Subjt:  MSRMTSNLLDEAIGIDDSTNLSPLVGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAVIFVAFSQSFVHYDRVLRKLGCNLAAQRDSHRFFFLDMLTV

Query:  GCSDRSGKETDEGVLVGLYCKIQRAVSALIQENKRHVTILIDDIPLLEVAANGSSNHVLDFLHYCHTLTSEIGCSIIALSHEDVYLDIERPLILQMEYLA
        GCSDRSGKET EGVLVGLYCKIQRAVSALIQENKRHVTI+IDDIPLLEVAANGSSNHVLDFLHYCHTLTSEIGCSIIALSHEDVYLDIERPLILQMEYLA
Subjt:  GCSDRSGKETDEGVLVGLYCKIQRAVSALIQENKRHVTILIDDIPLLEVAANGSSNHVLDFLHYCHTLTSEIGCSIIALSHEDVYLDIERPLILQMEYLA

Query:  EILIKVGPLATGIAKDVHGQLTVLNKPVGGLQENLRNRVHNFQFYIKENDRF
        ++LIKVGPLATGIAKDVHGQLTVLNKPVGGLQENLRNRVHNFQFYIKEN  F
Subjt:  EILIKVGPLATGIAKDVHGQLTVLNKPVGGLQENLRNRVHNFQFYIKENDRF

TrEMBL top hitse value%identityAlignment
A0A6J1CBS2 elongator complex protein 61.8e-12085.94Show/hide
Query:  MSRMTSNLLDEAIGIDDSTNLSPLVGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAVIFVAFSQSFVHYDRVLRKLGCNLAAQRDSHRFFFLDMLTV
        M RM SN+LDEA+G+DD    SPL+GRLLLVEDCVETSGAF+LHHLLKR+ SSP SSNAVIF+AFSQ F HYDRVLRKLGCNL AQRDS RF F DMLT+
Subjt:  MSRMTSNLLDEAIGIDDSTNLSPLVGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAVIFVAFSQSFVHYDRVLRKLGCNLAAQRDSHRFFFLDMLTV

Query:  GCSDRSGKETDEGVLVGLYCKIQRAVSALIQENKRHVTILIDDIPLLEVAANGSSNHVLDFLHYCHTLTSEIGCSIIALSHEDVYLDIERPLILQMEYLA
        GCSDRSGKETDEGVLVGLYCKIQRAV+ALIQ+NK+HVTI+IDDIPLLEVAANGSSNHVLDFLHYCHTLTSEIGCS+IAL+HEDVY+D ERP ILQMEYLA
Subjt:  GCSDRSGKETDEGVLVGLYCKIQRAVSALIQENKRHVTILIDDIPLLEVAANGSSNHVLDFLHYCHTLTSEIGCSIIALSHEDVYLDIERPLILQMEYLA

Query:  EILIKVGPLATGIAKDVHGQLTVLNKPVGGLQENLRNRVHNFQFYIKEN
        ++LIKVGPLATGIAKDVHGQLTVLNKPVGGLQ+NLRNRV NFQFYIKEN
Subjt:  EILIKVGPLATGIAKDVHGQLTVLNKPVGGLQENLRNRVHNFQFYIKEN

A0A6J1GYT6 elongator complex protein 6 isoform X18.1e-137100Show/hide
Query:  MSRMTSNLLDEAIGIDDSTNLSPLVGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAVIFVAFSQSFVHYDRVLRKLGCNLAAQRDSHRFFFLDMLTV
        MSRMTSNLLDEAIGIDDSTNLSPLVGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAVIFVAFSQSFVHYDRVLRKLGCNLAAQRDSHRFFFLDMLTV
Subjt:  MSRMTSNLLDEAIGIDDSTNLSPLVGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAVIFVAFSQSFVHYDRVLRKLGCNLAAQRDSHRFFFLDMLTV

Query:  GCSDRSGKETDEGVLVGLYCKIQRAVSALIQENKRHVTILIDDIPLLEVAANGSSNHVLDFLHYCHTLTSEIGCSIIALSHEDVYLDIERPLILQMEYLA
        GCSDRSGKETDEGVLVGLYCKIQRAVSALIQENKRHVTILIDDIPLLEVAANGSSNHVLDFLHYCHTLTSEIGCSIIALSHEDVYLDIERPLILQMEYLA
Subjt:  GCSDRSGKETDEGVLVGLYCKIQRAVSALIQENKRHVTILIDDIPLLEVAANGSSNHVLDFLHYCHTLTSEIGCSIIALSHEDVYLDIERPLILQMEYLA

Query:  EILIKVGPLATGIAKDVHGQLTVLNKPVGGLQENLRNRVHNFQFYIKEN
        EILIKVGPLATGIAKDVHGQLTVLNKPVGGLQENLRNRVHNFQFYIKEN
Subjt:  EILIKVGPLATGIAKDVHGQLTVLNKPVGGLQENLRNRVHNFQFYIKEN

A0A6J1GZV8 elongator complex protein 6 isoform X24.7e-13799.21Show/hide
Query:  MSRMTSNLLDEAIGIDDSTNLSPLVGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAVIFVAFSQSFVHYDRVLRKLGCNLAAQRDSHRFFFLDMLTV
        MSRMTSNLLDEAIGIDDSTNLSPLVGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAVIFVAFSQSFVHYDRVLRKLGCNLAAQRDSHRFFFLDMLTV
Subjt:  MSRMTSNLLDEAIGIDDSTNLSPLVGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAVIFVAFSQSFVHYDRVLRKLGCNLAAQRDSHRFFFLDMLTV

Query:  GCSDRSGKETDEGVLVGLYCKIQRAVSALIQENKRHVTILIDDIPLLEVAANGSSNHVLDFLHYCHTLTSEIGCSIIALSHEDVYLDIERPLILQMEYLA
        GCSDRSGKETDEGVLVGLYCKIQRAVSALIQENKRHVTILIDDIPLLEVAANGSSNHVLDFLHYCHTLTSEIGCSIIALSHEDVYLDIERPLILQMEYLA
Subjt:  GCSDRSGKETDEGVLVGLYCKIQRAVSALIQENKRHVTILIDDIPLLEVAANGSSNHVLDFLHYCHTLTSEIGCSIIALSHEDVYLDIERPLILQMEYLA

Query:  EILIKVGPLATGIAKDVHGQLTVLNKPVGGLQENLRNRVHNFQFYIKENDRF
        EILIKVGPLATGIAKDVHGQLTVLNKPVGGLQENLRNRVHNFQFYIKEN  F
Subjt:  EILIKVGPLATGIAKDVHGQLTVLNKPVGGLQENLRNRVHNFQFYIKENDRF

A0A6J1JAX8 elongator complex protein 6 isoform X24.6e-13295.98Show/hide
Query:  MSRMTSNLLDEAIGIDDSTNLSPLVGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAVIFVAFSQSFVHYDRVLRKLGCNLAAQRDSHRFFFLDMLTV
        MSRMTSNLLDEAIG+DDST+LSPLVGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAVIF+AFSQSFVHY+RVLRKLGCNLAAQRDSHRFFFLDMLTV
Subjt:  MSRMTSNLLDEAIGIDDSTNLSPLVGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAVIFVAFSQSFVHYDRVLRKLGCNLAAQRDSHRFFFLDMLTV

Query:  GCSDRSGKETDEGVLVGLYCKIQRAVSALIQENKRHVTILIDDIPLLEVAANGSSNHVLDFLHYCHTLTSEIGCSIIALSHEDVYLDIERPLILQMEYLA
        GCSDRSGKET EGVLVGLYCKIQRAVSALIQENKRHVTI+IDDIPLLEVAANGSSNHVLDFLHYCHTLTSEIG SIIALSHEDVYLDIERPLILQMEYLA
Subjt:  GCSDRSGKETDEGVLVGLYCKIQRAVSALIQENKRHVTILIDDIPLLEVAANGSSNHVLDFLHYCHTLTSEIGCSIIALSHEDVYLDIERPLILQMEYLA

Query:  EILIKVGPLATGIAKDVHGQLTVLNKPVGGLQENLRNRVHNFQFYIKEN
        ++LIKVGPLATGIAKDVHGQLTVLNKPVGGL+ENLRNRVHNFQFYIKEN
Subjt:  EILIKVGPLATGIAKDVHGQLTVLNKPVGGLQENLRNRVHNFQFYIKEN

A0A6J1JK13 elongator complex protein 6 isoform X12.7e-13295.24Show/hide
Query:  MSRMTSNLLDEAIGIDDSTNLSPLVGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAVIFVAFSQSFVHYDRVLRKLGCNLAAQRDSHRFFFLDMLTV
        MSRMTSNLLDEAIG+DDST+LSPLVGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAVIF+AFSQSFVHY+RVLRKLGCNLAAQRDSHRFFFLDMLTV
Subjt:  MSRMTSNLLDEAIGIDDSTNLSPLVGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAVIFVAFSQSFVHYDRVLRKLGCNLAAQRDSHRFFFLDMLTV

Query:  GCSDRSGKETDEGVLVGLYCKIQRAVSALIQENKRHVTILIDDIPLLEVAANGSSNHVLDFLHYCHTLTSEIGCSIIALSHEDVYLDIERPLILQMEYLA
        GCSDRSGKET EGVLVGLYCKIQRAVSALIQENKRHVTI+IDDIPLLEVAANGSSNHVLDFLHYCHTLTSEIG SIIALSHEDVYLDIERPLILQMEYLA
Subjt:  GCSDRSGKETDEGVLVGLYCKIQRAVSALIQENKRHVTILIDDIPLLEVAANGSSNHVLDFLHYCHTLTSEIGCSIIALSHEDVYLDIERPLILQMEYLA

Query:  EILIKVGPLATGIAKDVHGQLTVLNKPVGGLQENLRNRVHNFQFYIKENDRF
        ++LIKVGPLATGIAKDVHGQLTVLNKPVGGL+ENLRNRVHNFQFYIKEN  F
Subjt:  EILIKVGPLATGIAKDVHGQLTVLNKPVGGLQENLRNRVHNFQFYIKENDRF

SwissProt top hitse value%identityAlignment
B2RYG8 Elongator complex protein 64.9e-1430.23Show/hide
Query:  GRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAVIFVAFSQSFVHYDRVLRKLGCNLAAQRDSHRFFFLDMLTVGCSD-----------RSGKETDEGV
        G+L L+ D  +T G+F++HH L        ++  V FVA  QSF HY+ V +KLG +L A R+  +  FL+ L                 +  +E   G 
Subjt:  GRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAVIFVAFSQSFVHYDRVLRKLGCNLAAQRDSHRFFFLDMLTVGCSD-----------RSGKETDEGV

Query:  LVGLYCKIQRAVSALIQENK--RHVTILIDDIPLLEVAANGSSNHVLDFLHYCH-TLTSEIGCSIIALSHEDVYLDIERPLIL--QMEYLAEILIKVGPL
        L  LY  IQ  +          +   +L+D++ +L ++    +  VLDF+ YC  T+  E+  +++AL H+    + E   IL   + + + ++++   L
Subjt:  LVGLYCKIQRAVSALIQENK--RHVTILIDDIPLLEVAANGSSNHVLDFLHYCH-TLTSEIGCSIIALSHEDVYLDIERPLIL--QMEYLAEILIKVGPL

Query:  ATGIAKDVHGQLTVL
        ATG  KDVHGQL++L
Subjt:  ATGIAKDVHGQLTVL

Q0IHA2 Elongator complex protein 61.5e-1528.03Show/hide
Query:  VGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAVIFVAFSQSFVHYDRVLRKLGCNLAAQRDSHRFFFLDML----TVGCSDRSGKETDEGV------
        +G+  L+ D   T G+F++HH L        +   V FVA  QSF HY+ V +KLG NL++ +D  +  FL+ L     +   D+S  E    +      
Subjt:  VGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAVIFVAFSQSFVHYDRVLRKLGCNLAAQRDSHRFFFLDML----TVGCSDRSGKETDEGV------

Query:  --LVGLYCKIQRAVSALIQENKRHVTILIDDIPLLEVAANGSSNHVLDFLHYCH-TLTSEIGCSIIALSH-EDVYLDIERPLILQ-MEYLAEILIKVGPL
          L  LY  +  A++    +  +   +++DD+ +L ++   +S  VLDF+HYC  T+ ++   +++ L H  +   D E  L+L+ + + + ++++   L
Subjt:  --LVGLYCKIQRAVSALIQENKRHVTILIDDIPLLEVAANGSSNHVLDFLHYCH-TLTSEIGCSIIALSH-EDVYLDIERPLILQ-MEYLAEILIKVGPL

Query:  ATGIAKDVHGQLTVLNKPVGGLQENLRNRVHNFQFYIKE
        +TG  KDVHGQL ++   V   +   +N+   +Q+ I++
Subjt:  ATGIAKDVHGQLTVLNKPVGGLQENLRNRVHNFQFYIKE

Q0PNE2 Elongator complex protein 68.4e-1430.7Show/hide
Query:  GRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAVIFVAFSQSFVHYDRVLRKLGCNLAAQRDSHRFFFLDML--TVGCSDRSGK---------ETDEGV
        G+L L+ D  +T G+F++HH L        ++  V FVA  QSF HY  V +KLG +L   R+  +  FL+ L   V    ++ K         E + G 
Subjt:  GRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAVIFVAFSQSFVHYDRVLRKLGCNLAAQRDSHRFFFLDML--TVGCSDRSGK---------ETDEGV

Query:  LVGLYCKIQRAVSALIQENKR--HVTILIDDIPLLEVAANGSSNHVLDFLHYCH-TLTSEIGCSIIALSHEDVYLDIERPLIL--QMEYLAEILIKVGPL
        L  L+  ++ A+  +     R  +  +L+DD+ +L     G+   VLDF+HYC  T+  E+  +++ L H+    + E   IL   + + + ++++   L
Subjt:  LVGLYCKIQRAVSALIQENKR--HVTILIDDIPLLEVAANGSSNHVLDFLHYCH-TLTSEIGCSIIALSHEDVYLDIERPLIL--QMEYLAEILIKVGPL

Query:  ATGIAKDVHGQLTVL
        ATG  +DVHGQL +L
Subjt:  ATGIAKDVHGQLTVL

Q8BK75 Elongator complex protein 67.6e-1530.7Show/hide
Query:  GRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAVIFVAFSQSFVHYDRVLRKLGCNLAAQRDSHRFFFLDMLTVGCSD-----------RSGKETDEGV
        G L L+ D  +T G+F++HH L        ++  V FVA  QSF HY+ V +KLG +L A RD  +  FL+ L                 +  +E   G 
Subjt:  GRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAVIFVAFSQSFVHYDRVLRKLGCNLAAQRDSHRFFFLDMLTVGCSD-----------RSGKETDEGV

Query:  LVGLYCKIQRAVSALIQENK--RHVTILIDDIPLLEVAANGSSNHVLDFLHYCH-TLTSEIGCSIIALSH--EDVYLDIERPLILQMEYLAEILIKVGPL
        L  LY  IQ  +     E    ++  +L+D++ +L ++    +  VLDF+ YC  T+  E+  +++AL H  E    +    L+  + + + ++++   L
Subjt:  LVGLYCKIQRAVSALIQENK--RHVTILIDDIPLLEVAANGSSNHVLDFLHYCH-TLTSEIGCSIIALSH--EDVYLDIERPLILQMEYLAEILIKVGPL

Query:  ATGIAKDVHGQLTVL
        ATG  KDVHGQL++L
Subjt:  ATGIAKDVHGQLTVL

Q8L9Y2 Elongator complex protein 67.7e-6853.44Show/hide
Query:  NLLDEAIGIDDSTNL-SPLVGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAVIFVAFSQSFVHYDRVLRKLGCNLAAQRDSHRFFFLDMLTVGCSDR
        NLLD A+G D+   + SPL G+++L+EDCVETSG+FVLH L+KR  SS +SS+A+IF+AF++ F HYDR+LRKLGCNLA  + ++R  F DML V CSD 
Subjt:  NLLDEAIGIDDSTNL-SPLVGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAVIFVAFSQSFVHYDRVLRKLGCNLAAQRDSHRFFFLDMLTVGCSDR

Query:  SGKETDEGVLVGLYCKIQRAVSALIQENKRHVTILIDDIPLLEVAANGS-SNHVLDFLHYCHTLTSEIGCSIIALSHEDVYLDIERP-LILQMEYLAEIL
           E +   +  L+ +IQ  V  L      ++T+++DD+ LLE+A  GS S+HVLDFLHYCHTL+SE  CS++ L+HED+Y  +ERP  +LQM  LA+++
Subjt:  SGKETDEGVLVGLYCKIQRAVSALIQENKRHVTILIDDIPLLEVAANGS-SNHVLDFLHYCHTLTSEIGCSIIALSHEDVYLDIERP-LILQMEYLAEIL

Query:  IKVGPLATGIAKDVHGQLTVLNKPVGGL-QENLRNRVHNFQFYIKEN
        IK  PLA+G+A DVHGQLTVLNK +    + + RN++ NFQF IKEN
Subjt:  IKVGPLATGIAKDVHGQLTVLNKPVGGL-QENLRNRVHNFQFYIKEN

Arabidopsis top hitse value%identityAlignment
AT4G10090.1 elongator protein 65.5e-6953.44Show/hide
Query:  NLLDEAIGIDDSTNL-SPLVGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAVIFVAFSQSFVHYDRVLRKLGCNLAAQRDSHRFFFLDMLTVGCSDR
        NLLD A+G D+   + SPL G+++L+EDCVETSG+FVLH L+KR  SS +SS+A+IF+AF++ F HYDR+LRKLGCNLA  + ++R  F DML V CSD 
Subjt:  NLLDEAIGIDDSTNL-SPLVGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAVIFVAFSQSFVHYDRVLRKLGCNLAAQRDSHRFFFLDMLTVGCSDR

Query:  SGKETDEGVLVGLYCKIQRAVSALIQENKRHVTILIDDIPLLEVAANGS-SNHVLDFLHYCHTLTSEIGCSIIALSHEDVYLDIERP-LILQMEYLAEIL
           E +   +  L+ +IQ  V  L      ++T+++DD+ LLE+A  GS S+HVLDFLHYCHTL+SE  CS++ L+HED+Y  +ERP  +LQM  LA+++
Subjt:  SGKETDEGVLVGLYCKIQRAVSALIQENKRHVTILIDDIPLLEVAANGS-SNHVLDFLHYCHTLTSEIGCSIIALSHEDVYLDIERP-LILQMEYLAEIL

Query:  IKVGPLATGIAKDVHGQLTVLNKPVGGL-QENLRNRVHNFQFYIKEN
        IK  PLA+G+A DVHGQLTVLNK +    + + RN++ NFQF IKEN
Subjt:  IKVGPLATGIAKDVHGQLTVLNKPVGGL-QENLRNRVHNFQFYIKEN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCCGAATGACTTCCAATTTGCTTGATGAAGCTATAGGTATCGATGATTCTACGAATCTCTCCCCTCTGGTTGGCCGTCTGTTGCTTGTTGAGGATTGTGTTGAAAC
CAGCGGCGCTTTTGTTCTTCATCACCTCCTCAAGCGCGCCTTTTCTTCTCCTCACTCTTCCAATGCCGTCATCTTCGTTGCATTCTCTCAGTCCTTTGTTCACTATGACC
GCGTGCTCAGGAAACTGGGGTGTAACTTAGCTGCTCAAAGGGACAGCCATAGGTTCTTTTTCTTAGACATGCTTACGGTGGGCTGTTCAGATAGAAGTGGAAAGGAAACT
GATGAAGGTGTTCTTGTTGGACTGTACTGCAAAATTCAGAGAGCTGTTAGTGCCTTAATTCAAGAGAACAAAAGGCATGTCACCATTTTGATTGATGATATACCTCTTCT
GGAGGTTGCTGCCAATGGTTCTTCAAATCATGTCTTAGACTTCCTTCATTATTGCCACACTTTAACATCAGAAATTGGTTGTTCCATTATCGCACTTAGTCACGAAGATG
TTTACCTGGACATCGAAAGGCCACTGATTCTACAGATGGAATACCTTGCTGAAATTTTGATAAAAGTAGGCCCACTAGCCACTGGTATAGCAAAGGACGTTCATGGGCAG
CTGACAGTTTTGAACAAACCAGTCGGAGGCCTGCAAGAAAACTTAAGAAACAGAGTGCATAATTTTCAATTTTACATCAAGGAAAATGACAGATTTGATAATTATACCTT
TTTGTGTTGTACCATTTTGGCTCTTAACCCAGTGAAGTTGCCCGACTTCGAGCATCTGTTGATACTGTTTGTGATGCAACTAGAAAGGCGCTCTATTGAGGTCAGCACGG
ACAGTATAGATTCCTTGCTCTACAGTCGATTTGTTCTGTGTGAAACCTGCCTCTTTATTTGA
mRNA sequenceShow/hide mRNA sequence
TAAAAATTAAATTAAGTACAGCATAGGACCGCGAAGCATTTCCAGTTCCCACATTAGTAACCAAACGAAAAATTACTATATATTTGGTTTCTCCTTTCTCGCTCTCCTCC
GCCTGTCGCCGCCCTAAAACCTCGAACCATCATGAGCCGAATGACTTCCAATTTGCTTGATGAAGCTATAGGTATCGATGATTCTACGAATCTCTCCCCTCTGGTTGGCC
GTCTGTTGCTTGTTGAGGATTGTGTTGAAACCAGCGGCGCTTTTGTTCTTCATCACCTCCTCAAGCGCGCCTTTTCTTCTCCTCACTCTTCCAATGCCGTCATCTTCGTT
GCATTCTCTCAGTCCTTTGTTCACTATGACCGCGTGCTCAGGAAACTGGGGTGTAACTTAGCTGCTCAAAGGGACAGCCATAGGTTCTTTTTCTTAGACATGCTTACGGT
GGGCTGTTCAGATAGAAGTGGAAAGGAAACTGATGAAGGTGTTCTTGTTGGACTGTACTGCAAAATTCAGAGAGCTGTTAGTGCCTTAATTCAAGAGAACAAAAGGCATG
TCACCATTTTGATTGATGATATACCTCTTCTGGAGGTTGCTGCCAATGGTTCTTCAAATCATGTCTTAGACTTCCTTCATTATTGCCACACTTTAACATCAGAAATTGGT
TGTTCCATTATCGCACTTAGTCACGAAGATGTTTACCTGGACATCGAAAGGCCACTGATTCTACAGATGGAATACCTTGCTGAAATTTTGATAAAAGTAGGCCCACTAGC
CACTGGTATAGCAAAGGACGTTCATGGGCAGCTGACAGTTTTGAACAAACCAGTCGGAGGCCTGCAAGAAAACTTAAGAAACAGAGTGCATAATTTTCAATTTTACATCA
AGGAAAATGACAGATTTGATAATTATACCTTTTTGTGTTGTACCATTTTGGCTCTTAACCCAGTGAAGTTGCCCGACTTCGAGCATCTGTTGATACTGTTTGTGATGCAA
CTAGAAAGGCGCTCTATTGAGGTCAGCACGGACAGTATAGATTCCTTGCTCTACAGTCGATTTGTTCTGTGTGAAACCTGCCTCTTTATTTGA
Protein sequenceShow/hide protein sequence
MSRMTSNLLDEAIGIDDSTNLSPLVGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAVIFVAFSQSFVHYDRVLRKLGCNLAAQRDSHRFFFLDMLTVGCSDRSGKET
DEGVLVGLYCKIQRAVSALIQENKRHVTILIDDIPLLEVAANGSSNHVLDFLHYCHTLTSEIGCSIIALSHEDVYLDIERPLILQMEYLAEILIKVGPLATGIAKDVHGQ
LTVLNKPVGGLQENLRNRVHNFQFYIKENDRFDNYTFLCCTILALNPVKLPDFEHLLILFVMQLERRSIEVSTDSIDSLLYSRFVLCETCLFI