; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G013130 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G013130
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionRNA-binding (RRM/RBD/RNP motifs) family protein
Genome locationCmo_Chr04:6691049..6693145
RNA-Seq ExpressionCmoCh04G013130
SyntenyCmoCh04G013130
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022957203.1 probable RNA-binding protein ARP1 isoform X3 [Cucurbita moschata]3.2e-135100Show/hide
Query:  MFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQ
        MFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQ
Subjt:  MFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQ

Query:  GPQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTYIATDISYNHQKVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYHQ
        GPQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTYIATDISYNHQKVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYHQ
Subjt:  GPQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTYIATDISYNHQKVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYHQ

Query:  SQAMGMPAHIFPPSPTAAGPFAGVPPTSIMSKPASVGPNP
        SQAMGMPAHIFPPSPTAAGPFAGVPPTSIMSKPASVGPNP
Subjt:  SQAMGMPAHIFPPSPTAAGPFAGVPPTSIMSKPASVGPNP

XP_022957204.1 probable RNA-binding protein ARP1 isoform X4 [Cucurbita moschata]3.2e-135100Show/hide
Query:  MFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQ
        MFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQ
Subjt:  MFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQ

Query:  GPQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTYIATDISYNHQKVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYHQ
        GPQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTYIATDISYNHQKVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYHQ
Subjt:  GPQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTYIATDISYNHQKVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYHQ

Query:  SQAMGMPAHIFPPSPTAAGPFAGVPPTSIMSKPASVGPNP
        SQAMGMPAHIFPPSPTAAGPFAGVPPTSIMSKPASVGPNP
Subjt:  SQAMGMPAHIFPPSPTAAGPFAGVPPTSIMSKPASVGPNP

XP_022957205.1 probable RNA-binding protein ARP1 isoform X5 [Cucurbita moschata]1.4e-138100Show/hide
Query:  MFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQ
        MFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQ
Subjt:  MFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQ

Query:  GPQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTYIATDISYNHQKVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYHQ
        GPQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTYIATDISYNHQKVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYHQ
Subjt:  GPQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTYIATDISYNHQKVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYHQ

Query:  SQAMGMPAHIFPPSPTAAGPFAGVPPTSIMSKPASVGPNPVCLVVE
        SQAMGMPAHIFPPSPTAAGPFAGVPPTSIMSKPASVGPNPVCLVVE
Subjt:  SQAMGMPAHIFPPSPTAAGPFAGVPPTSIMSKPASVGPNPVCLVVE

XP_022957206.1 probable RNA-binding protein ARP1 isoform X6 [Cucurbita moschata]1.3e-13699.59Show/hide
Query:  MFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQ
        MFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQ
Subjt:  MFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQ

Query:  GPQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTYIATDISYNHQKVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYHQ
        GPQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTYIATDISYNH KVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYHQ
Subjt:  GPQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTYIATDISYNHQKVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYHQ

Query:  SQAMGMPAHIFPPSPTAAGPFAGVPPTSIMSKPASVGPNPVCLVVE
        SQAMGMPAHIFPPSPTAAGPFAGVPPTSIMSKPASVGPNPVCLVVE
Subjt:  SQAMGMPAHIFPPSPTAAGPFAGVPPTSIMSKPASVGPNPVCLVVE

XP_022999430.1 probable RNA-binding protein ARP1 isoform X4 [Cucurbita maxima]3.8e-13698.79Show/hide
Query:  MFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQ
        MFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFK+AESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQ
Subjt:  MFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQ

Query:  GPQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSP-TYIATDISYNHQKVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYH
        GPQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSP TYIATDISYNHQKVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYH
Subjt:  GPQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSP-TYIATDISYNHQKVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYH

Query:  QSQAMGMPAHIFPPSPTAAGPFAGVPPTSIMSKPASVGPNPVCLVVE
        QSQAMGMPAHIFPPSPTAAGPFA VPPTSIMSKPASVGPNPVCLVVE
Subjt:  QSQAMGMPAHIFPPSPTAAGPFAGVPPTSIMSKPASVGPNPVCLVVE

TrEMBL top hitse value%identityAlignment
A0A6J1GYK4 probable RNA-binding protein ARP1 isoform X11.6e-135100Show/hide
Query:  MFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQ
        MFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQ
Subjt:  MFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQ

Query:  GPQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTYIATDISYNHQKVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYHQ
        GPQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTYIATDISYNHQKVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYHQ
Subjt:  GPQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTYIATDISYNHQKVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYHQ

Query:  SQAMGMPAHIFPPSPTAAGPFAGVPPTSIMSKPASVGPNP
        SQAMGMPAHIFPPSPTAAGPFAGVPPTSIMSKPASVGPNP
Subjt:  SQAMGMPAHIFPPSPTAAGPFAGVPPTSIMSKPASVGPNP

A0A6J1GYL2 probable RNA-binding protein ARP1 isoform X66.4e-13799.59Show/hide
Query:  MFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQ
        MFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQ
Subjt:  MFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQ

Query:  GPQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTYIATDISYNHQKVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYHQ
        GPQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTYIATDISYNH KVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYHQ
Subjt:  GPQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTYIATDISYNHQKVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYHQ

Query:  SQAMGMPAHIFPPSPTAAGPFAGVPPTSIMSKPASVGPNPVCLVVE
        SQAMGMPAHIFPPSPTAAGPFAGVPPTSIMSKPASVGPNPVCLVVE
Subjt:  SQAMGMPAHIFPPSPTAAGPFAGVPPTSIMSKPASVGPNPVCLVVE

A0A6J1GZW6 probable RNA-binding protein ARP1 isoform X56.8e-139100Show/hide
Query:  MFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQ
        MFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQ
Subjt:  MFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQ

Query:  GPQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTYIATDISYNHQKVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYHQ
        GPQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTYIATDISYNHQKVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYHQ
Subjt:  GPQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTYIATDISYNHQKVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYHQ

Query:  SQAMGMPAHIFPPSPTAAGPFAGVPPTSIMSKPASVGPNPVCLVVE
        SQAMGMPAHIFPPSPTAAGPFAGVPPTSIMSKPASVGPNPVCLVVE
Subjt:  SQAMGMPAHIFPPSPTAAGPFAGVPPTSIMSKPASVGPNPVCLVVE

A0A6J1H1A2 probable RNA-binding protein ARP1 isoform X41.6e-135100Show/hide
Query:  MFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQ
        MFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQ
Subjt:  MFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQ

Query:  GPQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTYIATDISYNHQKVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYHQ
        GPQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTYIATDISYNHQKVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYHQ
Subjt:  GPQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTYIATDISYNHQKVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYHQ

Query:  SQAMGMPAHIFPPSPTAAGPFAGVPPTSIMSKPASVGPNP
        SQAMGMPAHIFPPSPTAAGPFAGVPPTSIMSKPASVGPNP
Subjt:  SQAMGMPAHIFPPSPTAAGPFAGVPPTSIMSKPASVGPNP

A0A6J1KFD3 probable RNA-binding protein ARP1 isoform X41.9e-13698.79Show/hide
Query:  MFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQ
        MFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFK+AESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQ
Subjt:  MFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQ

Query:  GPQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSP-TYIATDISYNHQKVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYH
        GPQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSP TYIATDISYNHQKVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYH
Subjt:  GPQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSP-TYIATDISYNHQKVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYH

Query:  QSQAMGMPAHIFPPSPTAAGPFAGVPPTSIMSKPASVGPNPVCLVVE
        QSQAMGMPAHIFPPSPTAAGPFA VPPTSIMSKPASVGPNPVCLVVE
Subjt:  QSQAMGMPAHIFPPSPTAAGPFAGVPPTSIMSKPASVGPNPVCLVVE

SwissProt top hitse value%identityAlignment
Q6GQD3 RNA-binding protein 24-A7.7e-2358.82Show/hide
Query:  DTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGAR
        DTT TK+FVGGL + T   ++R +FE FGDI EAV+ITD+ TG+S+GYGFVT  +  +A++AC+D  PII+GR+AN NLA LGA+
Subjt:  DTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGAR

Q6P8A7 RNA-binding protein 247.7e-2358.82Show/hide
Query:  DTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGAR
        DTT TK+FVGGL + T   ++R +FE FGDI EAV+ITD+ TG+S+GYGFVT  +  +A++AC+D  PII+GR+AN NLA LGA+
Subjt:  DTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGAR

Q76LC6 RNA-binding protein 241.2e-2341.24Show/hide
Query:  DTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQGPQ
        DTT TK+FVGGL + T   ++R +FE FG+I EAV+ITD+ TG+S+GYGFVT  +  +A +AC+D  PII+GR+AN NLA LGA+          P+  Q
Subjt:  DTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQGPQ

Query:  PGSNGGAPRTTSAAAGNHVQWYYPAGTH---PTAFHHQPHQAVPFYGYSPSPTYIATDISYNHQKVGYMNGGPYAQIYPGQAMVGANTLMPMYP
        PG   G P+   A     +Q  Y   TH   P AF  QP   +P       PT  AT  + +   + Y  G  YAQ Y   A   A      YP
Subjt:  PGSNGGAPRTTSAAAGNHVQWYYPAGTH---PTAFHHQPHQAVPFYGYSPSPTYIATDISYNHQKVGYMNGGPYAQIYPGQAMVGANTLMPMYP

Q9I8B3 RNA-binding protein 24-B7.7e-2358.82Show/hide
Query:  DTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGAR
        DTT TK+FVGGL + T   ++R +FE FGDI EAV+ITD+ TG+S+GYGFVT  +  +A++AC+D  PII+GR+AN NLA LGA+
Subjt:  DTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGAR

Q9M1S3 Probable RNA-binding protein ARP15.7e-5853.31Show/hide
Query:  FGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQG
        FGDT LTKVFVGGLAW+T KEAM DHF K+GDILEAVII+DKLT RSKGYGFVTFK+A++A +ACEDS PIINGRRANCNLASLG R        +P QG
Subjt:  FGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQG

Query:  PQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTYIATDISYNHQKVGYMNG----GPYAQIYP------------------
        P+ G+     R T    GNH QWYYP+G        Q HQAVPFYGY PS  Y+A ++++N QKVGY+ G    G YAQ+ P                  
Subjt:  PQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTYIATDISYNHQKVGYMNG----GPYAQIYP------------------

Query:  GQAMVG-ANTLMPMYPVYHYHQSQAMGMPAHIF-PPSPTAAGPFAGVPPTSIMSKPA
        G+ MVG A+ ++P Y VY YHQSQA+G P   F  P   +  P +G      + K A
Subjt:  GQAMVG-ANTLMPMYPVYHYHQSQAMGMPAHIF-PPSPTAAGPFAGVPPTSIMSKPA

Arabidopsis top hitse value%identityAlignment
AT1G22910.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.5e-3743.04Show/hide
Query:  GDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQGP
        GDTT TKVFVGGLAWET KE M+ HFE+FG+ILEAV+ITDK +GRSKGYGFVTF+EAE+A+ AC D+ P+I+GRRANCNLASLG +RS        P  P
Subjt:  GDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQGP

Query:  QPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSP-SPTYIATDISYNHQKVGYMNGGPYAQIY------PGQAMVGANTLMPMYPV
          G  G         +     +  P    P  F H PH  +  +GYSP SP Y +   +  +   G  +GG Y  +Y       G     A +  P YP 
Subjt:  QPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSP-SPTYIATDISYNHQKVGYMNGGPYAQIY------PGQAMVGANTLMPMYPV

Query:  YHYHQSQAMGMPAHIFPPSPTAAGPFAGVPPTSIMSK
           H       P   F    ++  P    PPT  M +
Subjt:  YHYHQSQAMGMPAHIFPPSPTAAGPFAGVPPTSIMSK

AT1G22910.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.1e-3742.8Show/hide
Query:  GDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQGP
        GDTT TKVFVGGLAWET KE M+ HFE+FG+ILEAV+ITDK +GRSKGYGFVTF+EAE+A+ AC D+ P+I+GRRANCNLASLG +RS        P  P
Subjt:  GDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQGP

Query:  QPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSP-SPTYIATDISYNHQKVGYMNGGPYAQIY------PGQAMVGANTLMPMYPV
          G  G         +     +  P    P  F H PH  +  +GYSP SP Y +   +  +   G  +GG Y  +Y       G     A +  P YP 
Subjt:  QPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSP-SPTYIATDISYNHQKVGYMNGGPYAQIY------PGQAMVGANTLMPMYPV

Query:  YHYHQSQAMGMPAHIFPPSPTAAGPFAGVPPTSIMSKPASVGP
           H       P   F    ++  P    PPT  M +   V P
Subjt:  YHYHQSQAMGMPAHIFPPSPTAAGPFAGVPPTSIMSKPASVGP

AT1G22910.3 RNA-binding (RRM/RBD/RNP motifs) family protein1.5e-3743.04Show/hide
Query:  GDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQGP
        GDTT TKVFVGGLAWET KE M+ HFE+FG+ILEAV+ITDK +GRSKGYGFVTF+EAE+A+ AC D+ P+I+GRRANCNLASLG +RS        P  P
Subjt:  GDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQGP

Query:  QPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSP-SPTYIATDISYNHQKVGYMNGGPYAQIY------PGQAMVGANTLMPMYPV
          G  G         +     +  P    P  F H PH  +  +GYSP SP Y +   +  +   G  +GG Y  +Y       G     A +  P YP 
Subjt:  QPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSP-SPTYIATDISYNHQKVGYMNGGPYAQIY------PGQAMVGANTLMPMYPV

Query:  YHYHQSQAMGMPAHIFPPSPTAAGPFAGVPPTSIMSK
           H       P   F    ++  P    PPT  M +
Subjt:  YHYHQSQAMGMPAHIFPPSPTAAGPFAGVPPTSIMSK

AT3G54770.1 RNA-binding (RRM/RBD/RNP motifs) family protein4.0e-5953.31Show/hide
Query:  FGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQG
        FGDT LTKVFVGGLAW+T KEAM DHF K+GDILEAVII+DKLT RSKGYGFVTFK+A++A +ACEDS PIINGRRANCNLASLG R        +P QG
Subjt:  FGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQG

Query:  PQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTYIATDISYNHQKVGYMNG----GPYAQIYP------------------
        P+ G+     R T    GNH QWYYP+G        Q HQAVPFYGY PS  Y+A ++++N QKVGY+ G    G YAQ+ P                  
Subjt:  PQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTYIATDISYNHQKVGYMNG----GPYAQIYP------------------

Query:  GQAMVG-ANTLMPMYPVYHYHQSQAMGMPAHIF-PPSPTAAGPFAGVPPTSIMSKPA
        G+ MVG A+ ++P Y VY YHQSQA+G P   F  P   +  P +G      + K A
Subjt:  GQAMVG-ANTLMPMYPVYHYHQSQAMGMPAHIF-PPSPTAAGPFAGVPPTSIMSKPA

AT3G54770.2 RNA-binding (RRM/RBD/RNP motifs) family protein2.8e-4449.15Show/hide
Query:  MRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGAR-RSSRSASATPPQGPQPGSNGGAPRTTSAAAGNHV
        M DHF K+GDILEAVII+DKLT RSKGYGFVTFK+A++A +ACEDS PIINGRRANCNLASLG R R      ATPP                   GNH 
Subjt:  MRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGAR-RSSRSASATPPQGPQPGSNGGAPRTTSAAAGNHV

Query:  QWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTYIATDISYNHQKVGYMNG----GPYAQIYP------------------GQAMVG-ANTLMPMYPVYHYH
        QWYYP+G        Q HQAVPFYGY PS  Y+A ++++N QKVGY+ G    G YAQ+ P                  G+ MVG A+ ++P Y VY YH
Subjt:  QWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTYIATDISYNHQKVGYMNG----GPYAQIYP------------------GQAMVG-ANTLMPMYPVYHYH

Query:  QSQAMGMPAHIF-PPSPTAAGPFAGVPPTSIMSKPA
        QSQA+G P   F  P   +  P +G      + K A
Subjt:  QSQAMGMPAHIF-PPSPTAAGPFAGVPPTSIMSKPA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGGGGATACCACTTTGACCAAGGTGTTCGTTGGGGGCTTGGCTTGGGAGACTCCCAAGGAAGCCATGAGAGATCACTTCGAGAAGTTCGGTGACATTCTCGAGGC
GGTTATCATCACCGATAAACTCACCGGCAGATCCAAGGGCTACGGATTCGTCACGTTCAAGGAAGCAGAATCGGCGAAGAAGGCTTGTGAGGATTCGGCTCCGATCATCA
ATGGCCGTCGAGCCAACTGTAATCTGGCTTCCCTTGGCGCTCGGCGATCCTCTAGGTCTGCTTCGGCTACTCCTCCGCAAGGTCCTCAACCAGGATCAAACGGTGGTGCG
CCGAGGACGACGTCAGCGGCAGCGGGAAACCACGTGCAGTGGTACTACCCGGCGGGGACTCATCCGACGGCGTTTCATCATCAGCCTCATCAGGCCGTCCCTTTCTATGG
ATACTCCCCAAGCCCCACCTACATCGCCACCGATATCAGTTACAACCATCAGAAGGTGGGGTATATGAACGGCGGGCCTTACGCGCAGATATATCCGGGGCAGGCCATGG
TGGGTGCGAACACATTGATGCCGATGTACCCGGTGTATCATTACCATCAATCACAGGCGATGGGGATGCCGGCACACATATTCCCGCCAAGTCCGACGGCGGCTGGGCCA
TTTGCGGGGGTTCCACCCACTTCCATTATGTCGAAACCCGCATCCGTTGGCCCCAACCCAGTTTGCTTGGTTGTGGAATAA
mRNA sequenceShow/hide mRNA sequence
AGATAGATAGGCATAGCCAGGGTTGGGCAATTGCCTATCTGTCAGCCTCTCTGTCTCTCTGTCTTCTTCCATTTCTTTATTTCCATACCACTCTGTTATTCTTCTCCCTT
CTCCCTTCTTATATAACCTTCTTCTTCTCTTCCCCACCACCATTTTCTCCCTCCTTCGCTTAATCACCGCCCATTCTTCAGCCATGTTTGGGGATACCACTTTGACCAAG
GTGTTCGTTGGGGGCTTGGCTTGGGAGACTCCCAAGGAAGCCATGAGAGATCACTTCGAGAAGTTCGGTGACATTCTCGAGGCGGTTATCATCACCGATAAACTCACCGG
CAGATCCAAGGGCTACGGATTCGTCACGTTCAAGGAAGCAGAATCGGCGAAGAAGGCTTGTGAGGATTCGGCTCCGATCATCAATGGCCGTCGAGCCAACTGTAATCTGG
CTTCCCTTGGCGCTCGGCGATCCTCTAGGTCTGCTTCGGCTACTCCTCCGCAAGGTCCTCAACCAGGATCAAACGGTGGTGCGCCGAGGACGACGTCAGCGGCAGCGGGA
AACCACGTGCAGTGGTACTACCCGGCGGGGACTCATCCGACGGCGTTTCATCATCAGCCTCATCAGGCCGTCCCTTTCTATGGATACTCCCCAAGCCCCACCTACATCGC
CACCGATATCAGTTACAACCATCAGAAGGTGGGGTATATGAACGGCGGGCCTTACGCGCAGATATATCCGGGGCAGGCCATGGTGGGTGCGAACACATTGATGCCGATGT
ACCCGGTGTATCATTACCATCAATCACAGGCGATGGGGATGCCGGCACACATATTCCCGCCAAGTCCGACGGCGGCTGGGCCATTTGCGGGGGTTCCACCCACTTCCATT
ATGTCGAAACCCGCATCCGTTGGCCCCAACCCAGTTTGCTTGGTTGTGGAATAATAGGTAGAGTTGGAGGAGGAGGATGCAGGGAATGATGATGATGGTGGTGGTGGTAA
AAGAAGAGCAGAGAAGAATCAAGTATAAACAAAATGGGGAAGCAGGCAAGCAGGCAGGCAGAGGCTAAGGAGGGACATTTTTATTTATTTATTTTAAAAATCTGAACATC
TCATTCTCTCGGTACATGGCAGACAAGGGAAAACAAAAAAAAAATAACAGAGTAGACAAGGTGACG
Protein sequenceShow/hide protein sequence
MFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQGPQPGSNGGA
PRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTYIATDISYNHQKVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYHQSQAMGMPAHIFPPSPTAAGP
FAGVPPTSIMSKPASVGPNPVCLVVE