CuGenDBv2

Gene ID	CmoCh04G013510
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	RING-type domain-containing protein
Genome location	Cmo_Chr04:6892041..6895904
RNA-Seq Expression	CmoCh04G013510
Synteny	CmoCh04G013510
Gene Ontology terms	GO:0016567 - protein ubiquitination (biological process) GO:0005737 - cytoplasm (cellular component) GO:0005515 - protein binding (molecular function) GO:0046872 - metal ion binding (molecular function) GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domains	IPR011990 - Tetratricopeptide-like helical domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6601081.1 Protein NCA1, partial [Cucurbita argyrosperma subsp. sororia]

1.3e-164

81.19

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Query:  MTPVCPSVKSARPDDASSRKQQGESVCPFAKSGCSDDASSRKQQSEAACPFSKSARSDDASLTKSPVEGEKGGADAASAGG-------------------
        MTPVCPSVKSARPDDASSRKQQGES CPFAKSGCSDDASSRKQQSEAA PFSKSARSDDASLTKSPVEGEKG ADAASAGG                   
Subjt:  MTPVCPSVKSARPDDASSRKQQGESVCPFAKSGCSDDASSRKQQSEAACPFSKSARSDDASLTKSPVEGEKGGADAASAGG-------------------

Query:  --------------------KACISRFNDCPLCGADIEKIEADANLQATVDRFIEGHARIKRPQVNSDKENEEVSESKVVIYEDLSMERGAFLIQQAMRA
                            KACISRFNDCPLCGADIEKIEADANLQATVDRFIEGHARIKRPQVNSDKENEEVSESKVVIYEDLSMERGAFLIQQAMRA
Subjt:  --------------------KACISRFNDCPLCGADIEKIEADANLQATVDRFIEGHARIKRPQVNSDKENEEVSESKVVIYEDLSMERGAFLIQQAMRA

Query:  FRAQNIGSAKSRLTVCVEDIRDQLERMGNSSELCSQLGAVLGTLGDCWYVGSLLSLTTGHILVINESWGGAWEIERRAAGDASSAIIHFEESVEFLSKLP
        FRAQNI SAKSRLTVCVEDIRDQLERMGNSSELCSQLGAVLGTLGDC                             RAAGDASSAIIHFEESVEFLSKLP
Subjt:  FRAQNIGSAKSRLTVCVEDIRDQLERMGNSSELCSQLGAVLGTLGDCWYVGSLLSLTTGHILVINESWGGAWEIERRAAGDASSAIIHFEESVEFLSKLP

Query:  EKTRE---TLSVSLNKIGDLKYYEGDLQAARSYYLRSLNVRQDWSKHHPDDPAQILDVAVSLAKVADVDSGLGNEDMAVDRFQEGIKLLESLTLNSENPG
        EKTRE   TLSVSLNKIGDLKYYEGDLQA RSYYLRSLNVRQDWSKHHPDDPAQILDVAVSLAKVADVDSGLGNEDMAVDRFQEGIKLLESLTLNSENPG
Subjt:  EKTRE---TLSVSLNKIGDLKYYEGDLQAARSYYLRSLNVRQDWSKHHPDDPAQILDVAVSLAKVADVDSGLGNEDMAVDRFQEGIKLLESLTLNSENPG

Query:  LEQR
        LEQR
Subjt:  LEQR

XP_022957022.1 protein NCA1-like [Cucurbita moschata]

3.9e-169

82.43

Show/hide

Query:  MTPVCPSVKSARPDDASSRKQQGESVCPFAKSGCSDDASSRKQQSEAACPFSKSARSDDASLTKSPVEGEKGGADAASAGG-------------------
        MTPVCPSVKSARPDDASSRKQQGESVCPFAKSGCSDDASSRKQQSEAACPFSKSARSDDASLTKSPVEGEKGGADAASAGG                   
Subjt:  MTPVCPSVKSARPDDASSRKQQGESVCPFAKSGCSDDASSRKQQSEAACPFSKSARSDDASLTKSPVEGEKGGADAASAGG-------------------

Query:  --------------------KACISRFNDCPLCGADIEKIEADANLQATVDRFIEGHARIKRPQVNSDKENEEVSESKVVIYEDLSMERGAFLIQQAMRA
                            KACISRFNDCPLCGADIEKIEADANLQATVDRFIEGHARIKRPQVNSDKENEEVSESKVVIYEDLSMERGAFLIQQAMRA
Subjt:  --------------------KACISRFNDCPLCGADIEKIEADANLQATVDRFIEGHARIKRPQVNSDKENEEVSESKVVIYEDLSMERGAFLIQQAMRA

Query:  FRAQNIGSAKSRLTVCVEDIRDQLERMGNSSELCSQLGAVLGTLGDCWYVGSLLSLTTGHILVINESWGGAWEIERRAAGDASSAIIHFEESVEFLSKLP
        FRAQNIGSAKSRLTVCVEDIRDQLERMGNSSELCSQLGAVLGTLGDC                             RAAGDASSAIIHFEESVEFLSKLP
Subjt:  FRAQNIGSAKSRLTVCVEDIRDQLERMGNSSELCSQLGAVLGTLGDCWYVGSLLSLTTGHILVINESWGGAWEIERRAAGDASSAIIHFEESVEFLSKLP

Query:  EKTRE---TLSVSLNKIGDLKYYEGDLQAARSYYLRSLNVRQDWSKHHPDDPAQILDVAVSLAKVADVDSGLGNEDMAVDRFQEGIKLLESLTLNSENPG
        EKTRE   TLSVSLNKIGDLKYYEGDLQAARSYYLRSLNVRQDWSKHHPDDPAQILDVAVSLAKVADVDSGLGNEDMAVDRFQEGIKLLESLTLNSENPG
Subjt:  EKTRE---TLSVSLNKIGDLKYYEGDLQAARSYYLRSLNVRQDWSKHHPDDPAQILDVAVSLAKVADVDSGLGNEDMAVDRFQEGIKLLESLTLNSENPG

Query:  LEQR
        LEQR
Subjt:  LEQR

XP_022999080.1 protein NCA1-like [Cucurbita maxima]

5.4e-163

80.2

Show/hide

Query:  MTPVCPSVKSARPDDASSRKQQGESVCPFAKSGCSDDASSRKQQSEAACPFSKSARSDDASLTKSPVEGEKGGADAASAGG-------------------
        MTPVCPSVKSARPDDASSRKQQGESVCPFAKSGCSDDASSRK QSEAACPF KSARSDDASLTKS VEGEKGGADAASA G                   
Subjt:  MTPVCPSVKSARPDDASSRKQQGESVCPFAKSGCSDDASSRKQQSEAACPFSKSARSDDASLTKSPVEGEKGGADAASAGG-------------------

Query:  --------------------KACISRFNDCPLCGADIEKIEADANLQATVDRFIEGHARIKRPQVNSDKENEEVSESKVVIYEDLSMERGAFLIQQAMRA
                            KACISRF DCPLCGADIEKIEADANLQATVDRFIEGHARIKRPQVNSDKENEEVSESKVVIYEDLSMERGAFLIQQAMRA
Subjt:  --------------------KACISRFNDCPLCGADIEKIEADANLQATVDRFIEGHARIKRPQVNSDKENEEVSESKVVIYEDLSMERGAFLIQQAMRA

Query:  FRAQNIGSAKSRLTVCVEDIRDQLERMGNSSELCSQLGAVLGTLGDCWYVGSLLSLTTGHILVINESWGGAWEIERRAAGDASSAIIHFEESVEFLSKLP
        FRAQNI SAKSRLTVCVEDIRDQLERMGNSSELCSQLGAV GTLGDC                             RAAGDASSAIIHFEESVEFLSKLP
Subjt:  FRAQNIGSAKSRLTVCVEDIRDQLERMGNSSELCSQLGAVLGTLGDCWYVGSLLSLTTGHILVINESWGGAWEIERRAAGDASSAIIHFEESVEFLSKLP

Query:  EKTRE---TLSVSLNKIGDLKYYEGDLQAARSYYLRSLNVRQDWSKHHPDDPAQILDVAVSLAKVADVDSGLGNEDMAVDRFQEGIKLLESLTLNSENPG
        EKTRE   TLSVSLNKIGDLKYYEGDLQAARSYYLRSLNVRQDWSKHHPDDPAQILDVAVSLAKVADVDSGLGNEDMAVDRFQEGIKLLESLTLN++NPG
Subjt:  EKTRE---TLSVSLNKIGDLKYYEGDLQAARSYYLRSLNVRQDWSKHHPDDPAQILDVAVSLAKVADVDSGLGNEDMAVDRFQEGIKLLESLTLNSENPG

Query:  LEQR
        LEQR
Subjt:  LEQR

XP_023539089.1 protein NCA1-like [Cucurbita pepo subsp. pepo]

1.6e-167

81.93

Show/hide

Query:  MTPVCPSVKSARPDDASSRKQQGESVCPFAKSGCSDDASSRKQQSEAACPFSKSARSDDASLTKSPVEGEKGGADAASAGG-------------------
        MTPVCPSVKSARPDDASSRKQQGESVCPFAKSGCSDDASSRK QSEAACPFSKSARSDDASLTKSPVEGEKGGADAASAGG                   
Subjt:  MTPVCPSVKSARPDDASSRKQQGESVCPFAKSGCSDDASSRKQQSEAACPFSKSARSDDASLTKSPVEGEKGGADAASAGG-------------------

Query:  --------------------KACISRFNDCPLCGADIEKIEADANLQATVDRFIEGHARIKRPQVNSDKENEEVSESKVVIYEDLSMERGAFLIQQAMRA
                            KACISRFNDCPLCGADIEKIEADANLQATVDRFIEGHARIKRPQVNSDKENEEVSESKVVIYEDLSMERGAFLIQQAMRA
Subjt:  --------------------KACISRFNDCPLCGADIEKIEADANLQATVDRFIEGHARIKRPQVNSDKENEEVSESKVVIYEDLSMERGAFLIQQAMRA

Query:  FRAQNIGSAKSRLTVCVEDIRDQLERMGNSSELCSQLGAVLGTLGDCWYVGSLLSLTTGHILVINESWGGAWEIERRAAGDASSAIIHFEESVEFLSKLP
        FRAQNI SAKSRLTVCVEDIRDQLERMGNSSELCSQLGAVLGTLGDC                             RAAGDASSAIIHFEESVEFLSKLP
Subjt:  FRAQNIGSAKSRLTVCVEDIRDQLERMGNSSELCSQLGAVLGTLGDCWYVGSLLSLTTGHILVINESWGGAWEIERRAAGDASSAIIHFEESVEFLSKLP

Query:  EKTRE---TLSVSLNKIGDLKYYEGDLQAARSYYLRSLNVRQDWSKHHPDDPAQILDVAVSLAKVADVDSGLGNEDMAVDRFQEGIKLLESLTLNSENPG
        EKTRE   TLSVSLNKIGDLKYYEGDLQAARSYYLRSLNVRQDWSKHHPDDPAQILDVAVSLAKVADVDSGLGNEDMAVDRFQEGIKLLESLTLNSENPG
Subjt:  EKTRE---TLSVSLNKIGDLKYYEGDLQAARSYYLRSLNVRQDWSKHHPDDPAQILDVAVSLAKVADVDSGLGNEDMAVDRFQEGIKLLESLTLNSENPG

Query:  LEQR
        LEQR
Subjt:  LEQR

XP_038893051.1 protein NCA1 [Benincasa hispida]

9.9e-149

74.82

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Query:  MTPVCPSVKSARPDDASSRKQQGESVCPFAKSGCSDDASSRKQQSEAACPFSKSARSDDASLTKSPVEGEKGG-----ADAASAGG--------------
        MTPV P VKSARPDDASSRK QGES CPFAKSG SDDASSRK QSEAACPFSKS RSDDASL K   E E  G     ADAA  GG              
Subjt:  MTPVCPSVKSARPDDASSRKQQGESVCPFAKSGCSDDASSRKQQSEAACPFSKSARSDDASLTKSPVEGEKGG-----ADAASAGG--------------

Query:  -------------------------KACISRFNDCPLCGADIEKIEADANLQATVDRFIEGHARIKRPQVNSDKENEEVSESKVVIYEDLSMERGAFLIQ
                                 KACISRFNDCPLCGADIEKIEADANLQATVDRFIEGHARIKRPQVNSDKE E+VSESKVVIYED+SMERGAFLIQ
Subjt:  -------------------------KACISRFNDCPLCGADIEKIEADANLQATVDRFIEGHARIKRPQVNSDKENEEVSESKVVIYEDLSMERGAFLIQ

Query:  QAMRAFRAQNIGSAKSRLTVCVEDIRDQLERMGNSSELCSQLGAVLGTLGDCWYVGSLLSLTTGHILVINESWGGAWEIERRAAGDASSAIIHFEESVEF
        QAMRAFRAQNI SAKSRLTVCVEDIRDQLERMG+SSELCSQLGAVLGTLGDC                             RAAGDASSAI HFEESVEF
Subjt:  QAMRAFRAQNIGSAKSRLTVCVEDIRDQLERMGNSSELCSQLGAVLGTLGDCWYVGSLLSLTTGHILVINESWGGAWEIERRAAGDASSAIIHFEESVEF

Query:  LSKLPEKTRE---TLSVSLNKIGDLKYYEGDLQAARSYYLRSLNVRQDWSKHHPDDPAQILDVAVSLAKVADVDSGLGNEDMAVDRFQEGIKLLESLTLN
        LSKLP+KT E   TLSVSLNKIGDLKYYEGDLQAARSYYLRSLNVRQ+ SKHHPDDPAQILDVAVSLAKVADVDSGLGNEDMAVDRFQEGIKLLESLTLN
Subjt:  LSKLPEKTRE---TLSVSLNKIGDLKYYEGDLQAARSYYLRSLNVRQDWSKHHPDDPAQILDVAVSLAKVADVDSGLGNEDMAVDRFQEGIKLLESLTLN

Query:  SENPGLEQR
        SENPGL+QR
Subjt:  SENPGLEQR

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BEN7 uncharacterized protein LOC103488802

1.7e-146

73.17

Show/hide

Query:  MTPVCPSVKSARPDDASSRKQQGESVCPFAKSGCSDDASSRKQQSEAACPFSKSARSDDA-SLTKSPVEGEKGGA-----DAASAGG-------------
        MTPVCP VKSARPDDASSRK QGES CPFAKSG SDDASSRK QSE+ACPFSKS RSDDA SL K+  EGE  GA     DAA AGG             
Subjt:  MTPVCPSVKSARPDDASSRKQQGESVCPFAKSGCSDDASSRKQQSEAACPFSKSARSDDA-SLTKSPVEGEKGGA-----DAASAGG-------------

Query:  --------------------------KACISRFNDCPLCGADIEKIEADANLQATVDRFIEGHARIKRPQVNSDKENEEVSESKVVIYEDLSMERGAFLI
                                  KACISRFNDCPLCGADIEK+EAD NLQATVDRFIEGHARIKRPQVNSDKE E+V+ESKVVIYED+SMERGAFLI
Subjt:  --------------------------KACISRFNDCPLCGADIEKIEADANLQATVDRFIEGHARIKRPQVNSDKENEEVSESKVVIYEDLSMERGAFLI

Query:  QQAMRAFRAQNIGSAKSRLTVCVEDIRDQLERMGNSSELCSQLGAVLGTLGDCWYVGSLLSLTTGHILVINESWGGAWEIERRAAGDASSAIIHFEESVE
        QQAMRAFRAQNI SAKSRLTVCVEDIRDQLE+MG+S ELCSQLGAVLGTLGDC                             RAAGDA+SAI HFEESVE
Subjt:  QQAMRAFRAQNIGSAKSRLTVCVEDIRDQLERMGNSSELCSQLGAVLGTLGDCWYVGSLLSLTTGHILVINESWGGAWEIERRAAGDASSAIIHFEESVE

Query:  FLSKLPEKTRE---TLSVSLNKIGDLKYYEGDLQAARSYYLRSLNVRQDWSKHHPDDPAQILDVAVSLAKVADVDSGLGNEDMAVDRFQEGIKLLESLTL
        FLSKLPEKT E   TLSVSLNKIGDLKYYEGDL+AARSYYLRSLNVRQD SKHHPDDPAQILDVAVSLAKVADVDSGLGNEDMAVDRFQEGIKLLESL+L
Subjt:  FLSKLPEKTRE---TLSVSLNKIGDLKYYEGDLQAARSYYLRSLNVRQDWSKHHPDDPAQILDVAVSLAKVADVDSGLGNEDMAVDRFQEGIKLLESLTL

Query:  NSENPGLEQR
        NSENP L+ R
Subjt:  NSENPGLEQR

A0A5D3CV76 Binding protein

1.7e-146

73.17

Show/hide

Query:  MTPVCPSVKSARPDDASSRKQQGESVCPFAKSGCSDDASSRKQQSEAACPFSKSARSDDA-SLTKSPVEGEKGGA-----DAASAGG-------------
        MTPVCP VKSARPDDASSRK QGES CPFAKSG SDDASSRK QSE+ACPFSKS RSDDA SL K+  EGE  GA     DAA AGG             
Subjt:  MTPVCPSVKSARPDDASSRKQQGESVCPFAKSGCSDDASSRKQQSEAACPFSKSARSDDA-SLTKSPVEGEKGGA-----DAASAGG-------------

Query:  --------------------------KACISRFNDCPLCGADIEKIEADANLQATVDRFIEGHARIKRPQVNSDKENEEVSESKVVIYEDLSMERGAFLI
                                  KACISRFNDCPLCGADIEK+EAD NLQATVDRFIEGHARIKRPQVNSDKE E+V+ESKVVIYED+SMERGAFLI
Subjt:  --------------------------KACISRFNDCPLCGADIEKIEADANLQATVDRFIEGHARIKRPQVNSDKENEEVSESKVVIYEDLSMERGAFLI

Query:  QQAMRAFRAQNIGSAKSRLTVCVEDIRDQLERMGNSSELCSQLGAVLGTLGDCWYVGSLLSLTTGHILVINESWGGAWEIERRAAGDASSAIIHFEESVE
        QQAMRAFRAQNI SAKSRLTVCVEDIRDQLE+MG+S ELCSQLGAVLGTLGDC                             RAAGDA+SAI HFEESVE
Subjt:  QQAMRAFRAQNIGSAKSRLTVCVEDIRDQLERMGNSSELCSQLGAVLGTLGDCWYVGSLLSLTTGHILVINESWGGAWEIERRAAGDASSAIIHFEESVE

Query:  FLSKLPEKTRE---TLSVSLNKIGDLKYYEGDLQAARSYYLRSLNVRQDWSKHHPDDPAQILDVAVSLAKVADVDSGLGNEDMAVDRFQEGIKLLESLTL
        FLSKLPEKT E   TLSVSLNKIGDLKYYEGDL+AARSYYLRSLNVRQD SKHHPDDPAQILDVAVSLAKVADVDSGLGNEDMAVDRFQEGIKLLESL+L
Subjt:  FLSKLPEKTRE---TLSVSLNKIGDLKYYEGDLQAARSYYLRSLNVRQDWSKHHPDDPAQILDVAVSLAKVADVDSGLGNEDMAVDRFQEGIKLLESLTL

Query:  NSENPGLEQR
        NSENP L+ R
Subjt:  NSENPGLEQR

A0A6J1GY05 protein NCA1-like

1.9e-169

82.43

Show/hide

Query:  MTPVCPSVKSARPDDASSRKQQGESVCPFAKSGCSDDASSRKQQSEAACPFSKSARSDDASLTKSPVEGEKGGADAASAGG-------------------
        MTPVCPSVKSARPDDASSRKQQGESVCPFAKSGCSDDASSRKQQSEAACPFSKSARSDDASLTKSPVEGEKGGADAASAGG                   
Subjt:  MTPVCPSVKSARPDDASSRKQQGESVCPFAKSGCSDDASSRKQQSEAACPFSKSARSDDASLTKSPVEGEKGGADAASAGG-------------------

Query:  --------------------KACISRFNDCPLCGADIEKIEADANLQATVDRFIEGHARIKRPQVNSDKENEEVSESKVVIYEDLSMERGAFLIQQAMRA
                            KACISRFNDCPLCGADIEKIEADANLQATVDRFIEGHARIKRPQVNSDKENEEVSESKVVIYEDLSMERGAFLIQQAMRA
Subjt:  --------------------KACISRFNDCPLCGADIEKIEADANLQATVDRFIEGHARIKRPQVNSDKENEEVSESKVVIYEDLSMERGAFLIQQAMRA

Query:  FRAQNIGSAKSRLTVCVEDIRDQLERMGNSSELCSQLGAVLGTLGDCWYVGSLLSLTTGHILVINESWGGAWEIERRAAGDASSAIIHFEESVEFLSKLP
        FRAQNIGSAKSRLTVCVEDIRDQLERMGNSSELCSQLGAVLGTLGDC                             RAAGDASSAIIHFEESVEFLSKLP
Subjt:  FRAQNIGSAKSRLTVCVEDIRDQLERMGNSSELCSQLGAVLGTLGDCWYVGSLLSLTTGHILVINESWGGAWEIERRAAGDASSAIIHFEESVEFLSKLP

Query:  EKTRE---TLSVSLNKIGDLKYYEGDLQAARSYYLRSLNVRQDWSKHHPDDPAQILDVAVSLAKVADVDSGLGNEDMAVDRFQEGIKLLESLTLNSENPG
        EKTRE   TLSVSLNKIGDLKYYEGDLQAARSYYLRSLNVRQDWSKHHPDDPAQILDVAVSLAKVADVDSGLGNEDMAVDRFQEGIKLLESLTLNSENPG
Subjt:  EKTRE---TLSVSLNKIGDLKYYEGDLQAARSYYLRSLNVRQDWSKHHPDDPAQILDVAVSLAKVADVDSGLGNEDMAVDRFQEGIKLLESLTLNSENPG

Query:  LEQR
        LEQR
Subjt:  LEQR

A0A6J1HT54 protein NCA1

1.4e-145

74.07

Show/hide

Query:  MTPVCPSVKSARPDDASSRKQQGESVCPFAKSGCSDDASSRKQQ-SEAACPFSKSARSDDASLTKSPVEGEKGGADAASAGG------------------
        MTPVCP VKSARPDDASSRK Q ES CPFAKSG SDDASSRKQQ SE++CPFSKSARSDDASL K   E EK  ADAA  GG                  
Subjt:  MTPVCPSVKSARPDDASSRKQQGESVCPFAKSGCSDDASSRKQQ-SEAACPFSKSARSDDASLTKSPVEGEKGGADAASAGG------------------

Query:  ---------------------KACISRFNDCPLCGADIEKIEADANLQATVDRFIEGHARIKRPQVNSDKENEEVSESKVVIYEDLSMERGAFLIQQAMR
                             KACISRFNDCPLCGADIEKIEA A+LQATVDRFIEGHARIKR Q+NSDKE EEVSESKVVIYEDLSMERGAFLIQQAMR
Subjt:  ---------------------KACISRFNDCPLCGADIEKIEADANLQATVDRFIEGHARIKRPQVNSDKENEEVSESKVVIYEDLSMERGAFLIQQAMR

Query:  AFRAQNIGSAKSRLTVCVEDIRDQLERMGNSSELCSQLGAVLGTLGDCWYVGSLLSLTTGHILVINESWGGAWEIERRAAGDASSAIIHFEESVEFLSKL
        AFRAQNI SAKSRLT+CVEDIRDQLER GNSSELCSQLGAVLGTLGDC                             RAAGDASSAI HFEESVEFLSKL
Subjt:  AFRAQNIGSAKSRLTVCVEDIRDQLERMGNSSELCSQLGAVLGTLGDCWYVGSLLSLTTGHILVINESWGGAWEIERRAAGDASSAIIHFEESVEFLSKL

Query:  PEKTRE---TLSVSLNKIGDLKYYEGDLQAARSYYLRSLNVRQDWSKHHPDDPAQILDVAVSLAKVADVDSGLGNEDMAVDRFQEGIKLLESLTLNSENP
        PEKTRE   TLSVSLNKIGDLKYYEGDLQAARSYYL+SLNVRQD SKHH +DP+QILDVAVSLAKVADVDSGLGNEDMAV+ F+EGIKLLESLTLNSENP
Subjt:  PEKTRE---TLSVSLNKIGDLKYYEGDLQAARSYYLRSLNVRQDWSKHHPDDPAQILDVAVSLAKVADVDSGLGNEDMAVDRFQEGIKLLESLTLNSENP

Query:  GLEQR
        GLEQR
Subjt:  GLEQR

A0A6J1KEA9 protein NCA1-like

2.6e-163

80.2

Show/hide

Query:  MTPVCPSVKSARPDDASSRKQQGESVCPFAKSGCSDDASSRKQQSEAACPFSKSARSDDASLTKSPVEGEKGGADAASAGG-------------------
        MTPVCPSVKSARPDDASSRKQQGESVCPFAKSGCSDDASSRK QSEAACPF KSARSDDASLTKS VEGEKGGADAASA G                   
Subjt:  MTPVCPSVKSARPDDASSRKQQGESVCPFAKSGCSDDASSRKQQSEAACPFSKSARSDDASLTKSPVEGEKGGADAASAGG-------------------

Query:  --------------------KACISRFNDCPLCGADIEKIEADANLQATVDRFIEGHARIKRPQVNSDKENEEVSESKVVIYEDLSMERGAFLIQQAMRA
                            KACISRF DCPLCGADIEKIEADANLQATVDRFIEGHARIKRPQVNSDKENEEVSESKVVIYEDLSMERGAFLIQQAMRA
Subjt:  --------------------KACISRFNDCPLCGADIEKIEADANLQATVDRFIEGHARIKRPQVNSDKENEEVSESKVVIYEDLSMERGAFLIQQAMRA

Query:  FRAQNIGSAKSRLTVCVEDIRDQLERMGNSSELCSQLGAVLGTLGDCWYVGSLLSLTTGHILVINESWGGAWEIERRAAGDASSAIIHFEESVEFLSKLP
        FRAQNI SAKSRLTVCVEDIRDQLERMGNSSELCSQLGAV GTLGDC                             RAAGDASSAIIHFEESVEFLSKLP
Subjt:  FRAQNIGSAKSRLTVCVEDIRDQLERMGNSSELCSQLGAVLGTLGDCWYVGSLLSLTTGHILVINESWGGAWEIERRAAGDASSAIIHFEESVEFLSKLP

Query:  EKTRE---TLSVSLNKIGDLKYYEGDLQAARSYYLRSLNVRQDWSKHHPDDPAQILDVAVSLAKVADVDSGLGNEDMAVDRFQEGIKLLESLTLNSENPG
        EKTRE   TLSVSLNKIGDLKYYEGDLQAARSYYLRSLNVRQDWSKHHPDDPAQILDVAVSLAKVADVDSGLGNEDMAVDRFQEGIKLLESLTLN++NPG
Subjt:  EKTRE---TLSVSLNKIGDLKYYEGDLQAARSYYLRSLNVRQDWSKHHPDDPAQILDVAVSLAKVADVDSGLGNEDMAVDRFQEGIKLLESLTLNSENPG

Query:  LEQR
        LEQR
Subjt:  LEQR

SwissProt top hits

e value

%identity

Alignment

Q9M2V1 Protein NCA1

3.7e-98

54.26

Show/hide

Query:  TPVCPSVKSARPDDASSRKQQGE---SVCPFAKSGCSDDASSRKQQSEAA--CPFSKSARSDDASLTKSP-VEG--EKGGADAASAGG------------
        T VCP  K+ARPDD S+RK QGE   S CPF+K+   DDAS+RKQ    A  CPFSKSAR D+      P  EG   K   D+A+               
Subjt:  TPVCPSVKSARPDDASSRKQQGE---SVCPFAKSGCSDDASSRKQQSEAA--CPFSKSARSDDASLTKSP-VEG--EKGGADAASAGG------------

Query:  ---------------------------KACISRFNDCPLCGADIEKIEADANLQATVDRFIEGHARIKRPQVNSDKENEEVSESKVVIYEDLSMERGAFL
                                   K C++RF DCPLCGADIE IE D NLQ  VD+FIEGHARIKR  VN  ++ E  +++K VIY D+SMERG+FL
Subjt:  ---------------------------KACISRFNDCPLCGADIEKIEADANLQATVDRFIEGHARIKRPQVNSDKENEEVSESKVVIYEDLSMERGAFL

Query:  IQQAMRAFRAQNIGSAKSRLTVCVEDIRDQLERMGNSSELCSQLGAVLGTLGDCWYVGSLLSLTTGHILVINESWGGAWEIERRAAGDASSAIIHFEESV
        +QQAMRAF AQN  SAKSRL +C EDIRDQL R GN+ ELCSQLGAVLG LGDC                             RA GD+SSA+ HFEESV
Subjt:  IQQAMRAFRAQNIGSAKSRLTVCVEDIRDQLERMGNSSELCSQLGAVLGTLGDCWYVGSLLSLTTGHILVINESWGGAWEIERRAAGDASSAIIHFEESV

Query:  EFLSKLPEKTRE---TLSVSLNKIGDLKYYEGDLQAARSYYLRSLNVRQDWSKHHPDDPAQILDVAVSLAKVADVDSGLGNEDMAVDRFQEGIKLLESLT
        EFL KLP    E   TLSVSLNKIGDLKYY+ DLQAARSYY R+LNVR+D  KHHP+ P+QILDVAVSLAKVAD+D  L NE  A D F+EG++LLESL 
Subjt:  EFLSKLPEKTRE---TLSVSLNKIGDLKYYEGDLQAARSYYLRSLNVRQDWSKHHPDDPAQILDVAVSLAKVADVDSGLGNEDMAVDRFQEGIKLLESLT

Query:  LNSENPGLEQR
        L+SE+  LEQR
Subjt:  LNSENPGLEQR

Arabidopsis top hits

e value

%identity

Alignment

AT3G54360.1 zinc ion binding

2.6e-99

54.26

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Query:  TPVCPSVKSARPDDASSRKQQGE---SVCPFAKSGCSDDASSRKQQSEAA--CPFSKSARSDDASLTKSP-VEG--EKGGADAASAGG------------
        T VCP  K+ARPDD S+RK QGE   S CPF+K+   DDAS+RKQ    A  CPFSKSAR D+      P  EG   K   D+A+               
Subjt:  TPVCPSVKSARPDDASSRKQQGE---SVCPFAKSGCSDDASSRKQQSEAA--CPFSKSARSDDASLTKSP-VEG--EKGGADAASAGG------------

Query:  ---------------------------KACISRFNDCPLCGADIEKIEADANLQATVDRFIEGHARIKRPQVNSDKENEEVSESKVVIYEDLSMERGAFL
                                   K C++RF DCPLCGADIE IE D NLQ  VD+FIEGHARIKR  VN  ++ E  +++K VIY D+SMERG+FL
Subjt:  ---------------------------KACISRFNDCPLCGADIEKIEADANLQATVDRFIEGHARIKRPQVNSDKENEEVSESKVVIYEDLSMERGAFL

Query:  IQQAMRAFRAQNIGSAKSRLTVCVEDIRDQLERMGNSSELCSQLGAVLGTLGDCWYVGSLLSLTTGHILVINESWGGAWEIERRAAGDASSAIIHFEESV
        +QQAMRAF AQN  SAKSRL +C EDIRDQL R GN+ ELCSQLGAVLG LGDC                             RA GD+SSA+ HFEESV
Subjt:  IQQAMRAFRAQNIGSAKSRLTVCVEDIRDQLERMGNSSELCSQLGAVLGTLGDCWYVGSLLSLTTGHILVINESWGGAWEIERRAAGDASSAIIHFEESV

Query:  EFLSKLPEKTRE---TLSVSLNKIGDLKYYEGDLQAARSYYLRSLNVRQDWSKHHPDDPAQILDVAVSLAKVADVDSGLGNEDMAVDRFQEGIKLLESLT
        EFL KLP    E   TLSVSLNKIGDLKYY+ DLQAARSYY R+LNVR+D  KHHP+ P+QILDVAVSLAKVAD+D  L NE  A D F+EG++LLESL 
Subjt:  EFLSKLPEKTRE---TLSVSLNKIGDLKYYEGDLQAARSYYLRSLNVRQDWSKHHPDDPAQILDVAVSLAKVADVDSGLGNEDMAVDRFQEGIKLLESLT

Query:  LNSENPGLEQR
        L+SE+  LEQR
Subjt:  LNSENPGLEQR

Sequences

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CDS sequence

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ATGGCCTTACCACTCGGTCCCGATGGGCAGCAGGTTAAGTTATTCCAACCCAAGTTTATGGTTGAAATCAGTATTTGGGCTAGTTTACGTGAGTTATCTCTTAAAACAAT
GACGTCGCTCGTGTTTATATTTTATACATTTGGAGAGCTTTGTGCATATTTTGAGAATACCGGTGCTTGGGAACCCGACGCGAACCGGGAAGTGACTTTGTATGCAGAAT
TCTACAGAGTCCTAGGGATTCTCAATTCGCAGGGAGATCGATCGAGAATCGCGATGACTCCTGTTTGTCCCTCCGTGAAATCTGCTCGTCCCGACGACGCTTCTTCACGG
AAGCAACAAGGGGAATCTGTTTGTCCGTTTGCGAAATCTGGCTGTTCCGATGATGCTTCTTCAAGAAAGCAGCAATCGGAGGCTGCTTGCCCGTTTTCGAAATCCGCTCG
TTCGGACGATGCTTCGTTGACGAAGAGTCCGGTTGAGGGGGAGAAAGGTGGGGCCGATGCTGCCAGTGCCGGTGGCAAAGCATGTATATCGCGTTTTAATGACTGTCCCC
TGTGTGGAGCTGACATTGAGAAGATTGAAGCAGACGCGAATCTGCAAGCTACGGTTGATCGCTTCATTGAAGGTCATGCGAGAATCAAGAGACCCCAGGTGAACTCAGAC
AAAGAGAATGAGGAAGTTAGTGAAAGTAAAGTAGTAATTTATGAAGACTTATCCATGGAGAGAGGTGCTTTCTTGATCCAACAAGCCATGAGGGCGTTTCGTGCCCAGAA
TATTGGAAGTGCCAAATCCAGGCTCACTGTCTGTGTTGAAGATATTCGAGATCAGTTAGAAAGAATGGGCAATTCATCAGAATTGTGCTCACAGCTTGGAGCGGTTCTCG
GCACACTTGGCGATTGTTGGTATGTTGGTTCTCTTCTCTCTCTTACGACAGGGCATATATTAGTTATCAATGAATCTTGGGGGGGTGCATGGGAGATTGAACGTCGAGCA
GCTGGAGATGCTAGTTCTGCAATCATTCACTTTGAAGAAAGTGTAGAATTTCTCTCAAAGCTGCCTGAAAAGACTCGCGAGACACTTTCTGTATCACTGAACAAAATTGG
TGATCTAAAGTATTATGAAGGAGACCTCCAAGCTGCAAGATCTTATTATCTCCGGTCTCTTAATGTTCGTCAAGATTGGAGCAAGCATCATCCAGATGATCCAGCTCAGA
TCCTAGATGTGGCTGTTTCACTTGCAAAAGTTGCAGATGTAGACAGCGGTCTAGGAAATGAAGATATGGCAGTTGATAGATTTCAGGAAGGCATAAAGTTGTTGGAATCA
TTAACACTGAATTCTGAGAACCCTGGTCTTGAACAGCGAGTCAGTTTGCCGAGCGACAAAAGCCTAATCGATCCAGTTGCTAGAGATCATCGTTCCAATCTTAGTTAA

mRNA sequence

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Protein sequence

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MALPLGPDGQQVKLFQPKFMVEISIWASLRELSLKTMTSLVFIFYTFGELCAYFENTGAWEPDANREVTLYAEFYRVLGILNSQGDRSRIAMTPVCPSVKSARPDDASSR
KQQGESVCPFAKSGCSDDASSRKQQSEAACPFSKSARSDDASLTKSPVEGEKGGADAASAGGKACISRFNDCPLCGADIEKIEADANLQATVDRFIEGHARIKRPQVNSD
KENEEVSESKVVIYEDLSMERGAFLIQQAMRAFRAQNIGSAKSRLTVCVEDIRDQLERMGNSSELCSQLGAVLGTLGDCWYVGSLLSLTTGHILVINESWGGAWEIERRA
AGDASSAIIHFEESVEFLSKLPEKTRETLSVSLNKIGDLKYYEGDLQAARSYYLRSLNVRQDWSKHHPDDPAQILDVAVSLAKVADVDSGLGNEDMAVDRFQEGIKLLES
LTLNSENPGLEQRVSLPSDKSLIDPVARDHRSNLS

CmoCh04G013510 (gene) of Cucurbita moschata (Rifu) v1 genome