; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G013520 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G013520
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr04:6895963..6899965
RNA-Seq ExpressionCmoCh04G013520
SyntenyCmoCh04G013520
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601083.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia]2.3e-1890.91Show/hide
Query:  HFP-GQSPKSYYSNILNQGFLEHIECSGSEFLGKLGRRSSPRRLNSARFSEIEPG
        HF  G SPK+YYSNILNQGFLEHIECSGS+FLGKLGRRSSPRRLNSARFSEIEPG
Subjt:  HFP-GQSPKSYYSNILNQGFLEHIECSGSEFLGKLGRRSSPRRLNSARFSEIEPG
KAG7031888.1 hypothetical protein SDJN02_05929 [Cucurbita argyrosperma subsp. argyrosperma]3.5e-5198.04Show/hide
Query:  MLEKQDDRSILHVLYGTHFPGQSPKSYYSNILNQGFLEHIECSGSEFLGKLGRRSSPRRLNSARFSEIEPGGSASQHWSKCIEGFKIKVHSISNHHRDEL
        MLEKQDDRSILHVLYGTHFPG SPKSYYSNILNQGFLEHIECSGS FLGKLGRRSSPRRLNSARFSEIEPGGSASQHWSKCIEGFKIKVHSISNHHRDEL
Subjt:  MLEKQDDRSILHVLYGTHFPGQSPKSYYSNILNQGFLEHIECSGSEFLGKLGRRSSPRRLNSARFSEIEPGGSASQHWSKCIEGFKIKVHSISNHHRDEL

Query:  TY
        TY
Subjt:  TY
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGAGAAACAAGATGATCGCAGCATTTTGCATGTGCTTTATGGTACTCATTTTCCAGGCCAGTCCCCTAAATCATATTATTCAAATATTTTGAATCAAGGGTTTCT
CGAGCATATCGAGTGCTCTGGGTCCGAGTTTCTTGGGAAATTGGGGCGGAGAAGCAGCCCAAGGAGGCTGAATTCGGCTAGGTTTTCCGAGATTGAACCAGGAGGATCAG
CATCTCAGCATTGGAGCAAATGCATTGAGGGTTTCAAAATAAAAGTTCATTCTATTTCTAACCATCATCGTGATGAGTTGACCTACTGA
mRNA sequenceShow/hide mRNA sequence
TCTGAAAGATTGCCGTCCAAGTGAGAGAGGCAGCCGCGGCTTGGCCTGGTTGCCGCCTCAACCCATCCCCATTCCATCCCCAGCGAAAACTTGCTTCTTCACTTCCAAAA
TTTTTATCTGCGAATTTTTCTCTGAAATTAGGGTTTCAGTTTGTTAAATCCCTAATCATATCGTCTATGCTCGTGTTAATGATTCTGAAAATCACTTCCATGTTCCTTAC
GAAGTACCGCTGCAACTACCGCAAGTTGAATTTCTGTAATCGGAGCTGAGTTCGGGAGGGATTTTCTTCCGCTTTTCTGCATTTTTCTCTATCAATCGGGCCCGTCATTG
AGCCTTCAGTATTTCATCGTTCTTCTGAGGCCTCTGCCATTTTTGGCGCCTTCAACTTTTGAGTGCCTTGGCTGCTTCATCTCGTCATCTCCGCATGGTTCAGTTTCTGA
TTCTTCATGAAGAGTGCATTTTCAATAATAAATTTCTGCTCCAAGCTCAACTTTGGAAGAAAAAGACCATGCAGATATTTTGCAACTGCCAATTCTGCGTTGTCTTCTTT
CAACTATGCGGACGAGGACTGCTTTACTTCTGAACTTCCTGCTGCTACTAACTCTGATGTTGACTCTGAAGAACAAAATTATTTTGGCAATGACGTTCAAGTTTCGAAAG
GCCTGAAAGCTGATGATGATGAAATGAAACTGATAAAATTGATACTTGGGAACCATGGGTTTAATCTTGGTTCGCATCCAAAACAATTGGAGATCGTAAGGATTTTGGAT
ATTCTATTTGAGGAGAGTTCAGATGCACGACTTTGTCTTTACTACTTCAAATGGTCAGGATGTTTATCTGGATCTAATCGGTCGCTGGAGTCGATCTGTAGGATGATACA
TATTTTGGTTGCTGGGAATATGAATCATAGGGCAGTTGATTTAATGTCACATCTTGTTAAAAATTATGGTAGTAAAGAGGGCTTTTCAACTATATTGCTGAAACTTTTCT
ATGAAACACACCATGAAAGGAAGACTTTAGAAACCACATGTAGCATGCTGGTTGACTGTTACATCAAGGAAAGAATGGTAACGGCTGCTCTTATATTGATGGGTCAAATG
AAGAGCTTCGACATATTTCCTTCTATATGGGTATACAAGTCGGTGATACAAGCTTTATTACAAACGAATCAGTCGGAGTCAGCCTGGGATCTTCTAGAAGAAATGCATAG
GCAAGGTATAAGTTTAAATTATTCGATTAATCTATTTATTTATCATTATTGTGCAAAAGGTAATCTGAGCAGGGGGTGGAAAGTGCTTTTGGAGTTGAGGAAATTCGGAT
CGAAGCCTGATGCAGTTGATTACACAATTGTGATCAACTCACTATGCAAAATCTCTCTTTTAAAAGAAGCCACTGCCTTGTTGTTTAAAATGACTGCTTTTGGTGTTTCC
CCTGATTCCGTTACGATGAGTTCTGTTATCGATGGTTATTGTAAACTAGGAAAGTTGGATATAGCTTGTAAAATATTGAAGTACTTTAGGCGTCCCTTAAATATTTTTAT
ATACAATAGCTTTATAACGAAGTTATGTATGGAAGGAAACACGGTAAAAGCTTCTGAAGTTTTTCTTGAAATGTCTGAGGTGGGCTTAGTTCCTGACTGTGTTAGTTACA
CAACCATGATAGGAGGCTATTGTAAAGTGGGAAACATAAACAGAGCATTTTCTTACCTGGGGAAGATGTTAAAAAGTGGAATACGACCTTCTGTTATCACGTATACTTTG
TTCATTGATTACTTTTGCAAGCGTAGAGATGTCGAAATGGCTGAAGTTATGCTCCAAAAGATGATTATTGAGGGTTTAAACCCCGATGTTGTCACGTATAATATTTTGAT
GGATGGATATGGAAAGAAGGGCTACTTGCACAAGGCTTTTGAACTTCTCGATACGATGAGATCTACAAATCTTACACCTGATGTTGTGACGTATAACACTCTCATTAATG
GTCTCGTTACGCGAGGGTTTCTTCAAGAGGCAAAGGATATGTTAGATGAGCTCAACAGGAGGGGTTTCAATATAGATGTTGTCACATACACTAATATCATACATGGATAT
TCGAAAAGGGGAAACTTTGAGGAAGCTTTTCTTGTTTGGTTTCATATGACTGACAACTGTGTAAAGCCTGATGTTGTTACTTGCAGTGCTCTTCTTAGTGGGTATTGTCG
AGAACGGCGTATAGACGAAGCAAATGCTCTATTTTGTAAAATGCTGGACATTGGGTTAAATCCAGACTTGATATTGTACAATACTCTAATCCATGGATTTTGCAGTGTTG
GTAATGTGGATGAAGGTTGCAATTTGGTTAAGAAGATGATCGAAAACAGTATCCTTCCGAACAATGTTACTCATCGTGCACTTGTTCTCGGATTTCAGAAAAGGAAGGTT
ATCGATCCAATAGAGAGTGCCACTTCTAAGCTTCAAGAAATCTTGCTTGCATATGATCTGCAGATTGATGCCAATGGATATATCTAATGTTGGAGAAACAAGATGATCGC
AGCATTTTGCATGTGCTTTATGGTACTCATTTTCCAGGCCAGTCCCCTAAATCATATTATTCAAATATTTTGAATCAAGGGTTTCTCGAGCATATCGAGTGCTCTGGGTC
CGAGTTTCTTGGGAAATTGGGGCGGAGAAGCAGCCCAAGGAGGCTGAATTCGGCTAGGTTTTCCGAGATTGAACCAGGAGGATCAGCATCTCAGCATTGGAGCAAATGCA
TTGAGGGTTTCAAAATAAAAGTTCATTCTATTTCTAACCATCATCGTGATGAGTTGACCTACTGA
Protein sequenceShow/hide protein sequence
MLEKQDDRSILHVLYGTHFPGQSPKSYYSNILNQGFLEHIECSGSEFLGKLGRRSSPRRLNSARFSEIEPGGSASQHWSKCIEGFKIKVHSISNHHRDELTY