; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G013790 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G013790
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionF-box domain-containing protein
Genome locationCmo_Chr04:7029857..7030706
RNA-Seq ExpressionCmoCh04G013790
SyntenyCmoCh04G013790
Gene Ontology termsNA
InterPro domainsIPR040338 - Putative F-box protein At1g67623-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601104.1 putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia]3.1e-11188.79Show/hide
Query:  MAGSLKRKSQALDSQISRYVSLIFACMITKMVRFSDFPPTIESLPNDLFIEVLAKVAAFSFTDLIQAKLATKEFLKASSHGYIFQHASLRNFQKLLWNNN
        M GSLKRKSQALDSQISR         ITKM RFSDFPPTIESLPNDL IEVLAKVA FSFTDL+QAKLATK+FL+ASSHGYIFQHASLRNFQKLLWNNN
Subjt:  MAGSLKRKSQALDSQISRYVSLIFACMITKMVRFSDFPPTIESLPNDLFIEVLAKVAAFSFTDLIQAKLATKEFLKASSHGYIFQHASLRNFQKLLWNNN

Query:  PEFWSFMEKCNNNGNPETLYQKGMFEFFTHCREASGMAYLKLSAQKGYPEACYVYGIILYAASLEDEGVKFLKICEAKLGFKLAECRRRVKEFVRYLWVK
         EFWSFMEKCNNNGN +TLYQKGM EFFTHCREASGMAYLKLSAQKGYPEACYVYGIILYA SLEDEGVKFLKICEAKLGFKLAECRRRVKEFVRYLWVK
Subjt:  PEFWSFMEKCNNNGNPETLYQKGMFEFFTHCREASGMAYLKLSAQKGYPEACYVYGIILYAASLEDEGVKFLKICEAKLGFKLAECRRRVKEFVRYLWVK

Query:  NKISLLEKDSSDQRGCESVVKNCYKKNVRRIG
        NKISL E DS DQRGCE+VVKNC KKNVRRIG
Subjt:  NKISLLEKDSSDQRGCESVVKNCYKKNVRRIG

XP_022957269.1 putative F-box protein At1g67623 [Cucurbita moschata]3.3e-12196.12Show/hide
Query:  MAGSLKRKSQALDSQISRYVSLIFACMITKMVRFSDFPPTIESLPNDLFIEVLAKVAAFSFTDLIQAKLATKEFLKASSHGYIFQHASLRNFQKLLWNNN
        MAGSLKRKSQALDSQISR         ITKMVRFSDFPPTIESLPNDLFIEVLAKVAAFSFTDLIQAKLATKEFLKASSHGYIFQHASLRNFQKLLWNNN
Subjt:  MAGSLKRKSQALDSQISRYVSLIFACMITKMVRFSDFPPTIESLPNDLFIEVLAKVAAFSFTDLIQAKLATKEFLKASSHGYIFQHASLRNFQKLLWNNN

Query:  PEFWSFMEKCNNNGNPETLYQKGMFEFFTHCREASGMAYLKLSAQKGYPEACYVYGIILYAASLEDEGVKFLKICEAKLGFKLAECRRRVKEFVRYLWVK
        PEFWSFMEKCNNNGNPETLYQKGMFEFFTHCREASGMAYLKLSAQKGYPEACYVYGIILYAASLEDEGVKFLKICEAKLGFKLAECRRRVKEFVRYLWVK
Subjt:  PEFWSFMEKCNNNGNPETLYQKGMFEFFTHCREASGMAYLKLSAQKGYPEACYVYGIILYAASLEDEGVKFLKICEAKLGFKLAECRRRVKEFVRYLWVK

Query:  NKISLLEKDSSDQRGCESVVKNCYKKNVRRIG
        NKISLLEKDSSDQRGCESVVKNCYKKNVRRIG
Subjt:  NKISLLEKDSSDQRGCESVVKNCYKKNVRRIG

XP_023549398.1 putative F-box protein At1g67623 [Cucurbita pepo subsp. pepo]1.0e-11490.95Show/hide
Query:  MAGSLKRKSQALDSQISRYVSLIFACMITKMVRFSDFPPTIESLPNDLFIEVLAKVAAFSFTDLIQAKLATKEFLKASSHGYIFQHASLRNFQKLLWNNN
        MAG LKRKSQALDSQISR          TKM RF+DFPPTIESLPNDL IEVLAKVAAFSFTDL+QAKLATKEFLKASSHGYIFQHASLRNFQKL+WNNN
Subjt:  MAGSLKRKSQALDSQISRYVSLIFACMITKMVRFSDFPPTIESLPNDLFIEVLAKVAAFSFTDLIQAKLATKEFLKASSHGYIFQHASLRNFQKLLWNNN

Query:  PEFWSFMEKCNNNGNPETLYQKGMFEFFTHCREASGMAYLKLSAQKGYPEACYVYGIILYAASLEDEGVKFLKICEAKLGFKLAECRRRVKEFVRYLWVK
        PEFWSFMEKCNNNGNPETLYQKGM EFFTHCREASG+AYLKLSAQKGYPE CYVYGIILYAASLEDEGVKFLKICEAKLGFKLAECRRRVKEFVRYLWVK
Subjt:  PEFWSFMEKCNNNGNPETLYQKGMFEFFTHCREASGMAYLKLSAQKGYPEACYVYGIILYAASLEDEGVKFLKICEAKLGFKLAECRRRVKEFVRYLWVK

Query:  NKISLLEKDSSDQRGCESVVKNCYKKNVRRIG
        NKISL EKDSSDQRGCESVVKNC KKNVRRIG
Subjt:  NKISLLEKDSSDQRGCESVVKNCYKKNVRRIG

XP_023549459.1 putative F-box protein At1g67623 [Cucurbita pepo subsp. pepo]2.1e-11591.38Show/hide
Query:  MAGSLKRKSQALDSQISRYVSLIFACMITKMVRFSDFPPTIESLPNDLFIEVLAKVAAFSFTDLIQAKLATKEFLKASSHGYIFQHASLRNFQKLLWNNN
        MAGSLKRKSQALDSQISR          TKM RF+DFPPTIESLPNDL IEVLAKVAAFSFTDL+QAKLATKEFLKASSHGYIFQHASLRNFQKL+WNNN
Subjt:  MAGSLKRKSQALDSQISRYVSLIFACMITKMVRFSDFPPTIESLPNDLFIEVLAKVAAFSFTDLIQAKLATKEFLKASSHGYIFQHASLRNFQKLLWNNN

Query:  PEFWSFMEKCNNNGNPETLYQKGMFEFFTHCREASGMAYLKLSAQKGYPEACYVYGIILYAASLEDEGVKFLKICEAKLGFKLAECRRRVKEFVRYLWVK
        PEFWSFMEKCNNNGNPETLYQKGM EFFTHCREASG+AYLKLSAQKGYPE CYVYGIILYAASLEDEGVKFLKICEAKLGFKLAECRRRVKEFVRYLWVK
Subjt:  PEFWSFMEKCNNNGNPETLYQKGMFEFFTHCREASGMAYLKLSAQKGYPEACYVYGIILYAASLEDEGVKFLKICEAKLGFKLAECRRRVKEFVRYLWVK

Query:  NKISLLEKDSSDQRGCESVVKNCYKKNVRRIG
        NKISL EKDSSDQRGCESVVKNC KKNVRRIG
Subjt:  NKISLLEKDSSDQRGCESVVKNCYKKNVRRIG

XP_023549584.1 putative F-box protein At1g67623 [Cucurbita pepo subsp. pepo]1.0e-11491.38Show/hide
Query:  MAGSLKRKSQALDSQISRYVSLIFACMITKMVRFSDFPPTIESLPNDLFIEVLAKVAAFSFTDLIQAKLATKEFLKASSHGYIFQHASLRNFQKLLWNNN
        MAG LKRKSQALDSQISR          TKM RF+DFPPTIESLPNDL IEVLAKVAAFSFTDL+QAKLATKEFL+ASSHGYIFQHASLRNFQKLLWNNN
Subjt:  MAGSLKRKSQALDSQISRYVSLIFACMITKMVRFSDFPPTIESLPNDLFIEVLAKVAAFSFTDLIQAKLATKEFLKASSHGYIFQHASLRNFQKLLWNNN

Query:  PEFWSFMEKCNNNGNPETLYQKGMFEFFTHCREASGMAYLKLSAQKGYPEACYVYGIILYAASLEDEGVKFLKICEAKLGFKLAECRRRVKEFVRYLWVK
        PEFWSFMEKCNNNGNPETLY KGM EFFTHCREASGMAYLKLSAQKGYPEACYVYGIILYAASLEDEGVKFLKICEAKLGFKLAECRRRVKEFVRYLWVK
Subjt:  PEFWSFMEKCNNNGNPETLYQKGMFEFFTHCREASGMAYLKLSAQKGYPEACYVYGIILYAASLEDEGVKFLKICEAKLGFKLAECRRRVKEFVRYLWVK

Query:  NKISLLEKDSSDQRGCESVVKNCYKKNVRRIG
        NKISL EKDSSDQRGCESVVKNC KKNVRRIG
Subjt:  NKISLLEKDSSDQRGCESVVKNCYKKNVRRIG

TrEMBL top hitse value%identityAlignment
A0A6J1GZQ6 F-box protein At2g35280-like1.2e-10080.6Show/hide
Query:  MAGSLKRKSQALDSQISRYVSLIFACMITKMVRFSDFPPTIESLPNDLFIEVLAKVAAFSFTDLIQAKLATKEFLKASSHGYIFQHASLRNFQKLLWNNN
        MAGSLKRKSQAL SQIS  +         KM RFS  PP IESLPNDL IEVLAKVAA SFTDL+ AKLATK+FL+ASSH YIFQHASL NF KLLWNN+
Subjt:  MAGSLKRKSQALDSQISRYVSLIFACMITKMVRFSDFPPTIESLPNDLFIEVLAKVAAFSFTDLIQAKLATKEFLKASSHGYIFQHASLRNFQKLLWNNN

Query:  PEFWSFMEKCNNNGNPETLYQKGMFEFFTHCREASGMAYLKLSAQKGYPEACYVYGIILYAASLEDEGVKFLKICEAKLGFKLAECRRRVKEFVRYLWVK
         EFWSFMEKCNNNGNPETLY+KGM EFFTHCREASGMAYLKLSAQKGYP+ACYVYGIILYA S+EDEGVKFLKICEAKLGFKLA+CR RVKEF+ YLWVK
Subjt:  PEFWSFMEKCNNNGNPETLYQKGMFEFFTHCREASGMAYLKLSAQKGYPEACYVYGIILYAASLEDEGVKFLKICEAKLGFKLAECRRRVKEFVRYLWVK

Query:  NKISLLEKDSSDQRGCESVVKNCYKKNVRRIG
        NKI +LE DSS++RGCESV+KNC +KNVRRIG
Subjt:  NKISLLEKDSSDQRGCESVVKNCYKKNVRRIG

A0A6J1H022 putative F-box protein At1g676231.8e-10493.56Show/hide
Query:  MVRFSDFPPTIESLPNDLFIEVLAKVAAFSFTDLIQAKLATKEFLKASSHGYIFQHASLRNFQKLLWNNNPEFWSFMEKCNNNGNPETLYQKGMFEFFTH
        M RFSDFPPTIESLPNDL IEVLAKVAAFSFTDL+QAKLATKEFL+ASSHGYIFQHASLRNFQKLLWNNNPEFWSFMEKCNNNGNPETLYQKGM EFFT+
Subjt:  MVRFSDFPPTIESLPNDLFIEVLAKVAAFSFTDLIQAKLATKEFLKASSHGYIFQHASLRNFQKLLWNNNPEFWSFMEKCNNNGNPETLYQKGMFEFFTH

Query:  CREASGMAYLKLSAQKGYPEACYVYGIILYAASLEDEGVKFLKICEAKLGFKLAECRRRVKEFVRYLWVKNKISLLEKDSSDQRGCESVVKNCYKKNVRR
        CREASGMAYLKLSAQKGY EACYVYGIILY AS EDEGVKFLKICEAKLGFKLAECRRRVKE VRYLWVKNKISL +KDSSDQRGCESVVKNC KKNVRR
Subjt:  CREASGMAYLKLSAQKGYPEACYVYGIILYAASLEDEGVKFLKICEAKLGFKLAECRRRVKEFVRYLWVKNKISLLEKDSSDQRGCESVVKNCYKKNVRR

Query:  IG
        IG
Subjt:  IG

A0A6J1H1G4 putative F-box protein At1g676231.6e-12196.12Show/hide
Query:  MAGSLKRKSQALDSQISRYVSLIFACMITKMVRFSDFPPTIESLPNDLFIEVLAKVAAFSFTDLIQAKLATKEFLKASSHGYIFQHASLRNFQKLLWNNN
        MAGSLKRKSQALDSQISR         ITKMVRFSDFPPTIESLPNDLFIEVLAKVAAFSFTDLIQAKLATKEFLKASSHGYIFQHASLRNFQKLLWNNN
Subjt:  MAGSLKRKSQALDSQISRYVSLIFACMITKMVRFSDFPPTIESLPNDLFIEVLAKVAAFSFTDLIQAKLATKEFLKASSHGYIFQHASLRNFQKLLWNNN

Query:  PEFWSFMEKCNNNGNPETLYQKGMFEFFTHCREASGMAYLKLSAQKGYPEACYVYGIILYAASLEDEGVKFLKICEAKLGFKLAECRRRVKEFVRYLWVK
        PEFWSFMEKCNNNGNPETLYQKGMFEFFTHCREASGMAYLKLSAQKGYPEACYVYGIILYAASLEDEGVKFLKICEAKLGFKLAECRRRVKEFVRYLWVK
Subjt:  PEFWSFMEKCNNNGNPETLYQKGMFEFFTHCREASGMAYLKLSAQKGYPEACYVYGIILYAASLEDEGVKFLKICEAKLGFKLAECRRRVKEFVRYLWVK

Query:  NKISLLEKDSSDQRGCESVVKNCYKKNVRRIG
        NKISLLEKDSSDQRGCESVVKNCYKKNVRRIG
Subjt:  NKISLLEKDSSDQRGCESVVKNCYKKNVRRIG

A0A6J1JRV1 putative F-box protein At1g676232.9e-9979.31Show/hide
Query:  MAGSLKRKSQALDSQISRYVSLIFACMITKMVRFSDFPPTIESLPNDLFIEVLAKVAAFSFTDLIQAKLATKEFLKASSHGYIFQHASLRNFQKLLWNNN
        MAGSLKRKSQ+L S ISR          TK  R S  PP IESLPNDL IE+LAKVAA S+TDL+QAKLATK+FL+ASSH YIFQHASL NF KLLWNN+
Subjt:  MAGSLKRKSQALDSQISRYVSLIFACMITKMVRFSDFPPTIESLPNDLFIEVLAKVAAFSFTDLIQAKLATKEFLKASSHGYIFQHASLRNFQKLLWNNN

Query:  PEFWSFMEKCNNNGNPETLYQKGMFEFFTHCREASGMAYLKLSAQKGYPEACYVYGIILYAASLEDEGVKFLKICEAKLGFKLAECRRRVKEFVRYLWVK
         EFWSFMEKCNNNGNPETLY+KGM EFFTHCREASGM YLK+SAQKGY EACYVYGIILYA S+EDEGVKFLKICE KLGFKLAECRRRVKEFVR+LWVK
Subjt:  PEFWSFMEKCNNNGNPETLYQKGMFEFFTHCREASGMAYLKLSAQKGYPEACYVYGIILYAASLEDEGVKFLKICEAKLGFKLAECRRRVKEFVRYLWVK

Query:  NKISLLEKDSSDQRGCESVVKNCYKKNVRRIG
        NKIS+ EK S+D+RGCE+V+KNC KKNVRRIG
Subjt:  NKISLLEKDSSDQRGCESVVKNCYKKNVRRIG

A0A6J1JRX4 putative F-box protein At1g676233.4e-10080.17Show/hide
Query:  MAGSLKRKSQALDSQISRYVSLIFACMITKMVRFSDFPPTIESLPNDLFIEVLAKVAAFSFTDLIQAKLATKEFLKASSHGYIFQHASLRNFQKLLWNNN
        MAGSLKRKSQAL SQISR          TK  R S  PP IESLPNDL IE+LAKVAA S+TDL+QAKLATK+FL+ASSH YIFQHASL NF KLLWNN+
Subjt:  MAGSLKRKSQALDSQISRYVSLIFACMITKMVRFSDFPPTIESLPNDLFIEVLAKVAAFSFTDLIQAKLATKEFLKASSHGYIFQHASLRNFQKLLWNNN

Query:  PEFWSFMEKCNNNGNPETLYQKGMFEFFTHCREASGMAYLKLSAQKGYPEACYVYGIILYAASLEDEGVKFLKICEAKLGFKLAECRRRVKEFVRYLWVK
         EFWSFMEKCNNNGNPETLY+KGM EFFTHCREASGM YLK+SAQKGY EACYVYGIILYA S+EDEGVKFLKICE KLGFKLAECRRRVKEFVR+LWVK
Subjt:  PEFWSFMEKCNNNGNPETLYQKGMFEFFTHCREASGMAYLKLSAQKGYPEACYVYGIILYAASLEDEGVKFLKICEAKLGFKLAECRRRVKEFVRYLWVK

Query:  NKISLLEKDSSDQRGCESVVKNCYKKNVRRIG
        NKIS+ EK S+D+RGCE+V+KNC KKNVRRIG
Subjt:  NKISLLEKDSSDQRGCESVVKNCYKKNVRRIG

SwissProt top hitse value%identityAlignment
Q9FXC7 Putative F-box protein At1g676236.6e-1636.13Show/hide
Query:  IESLPNDLFIEVLAKVAAFSFTDLIQAKLATKEFLKASSHGYIFQHASLRNFQKLLWNNNPEFWSFMEKCNNNGNPETLYQKGMFEFFTHCREASGMAYL
        ++SLP DL +E+ +   A S + +   +L +K F +     Y+F   SL+  + L W+ N     F+E+C  + NPE L+QKG   +F    +  G+ YL
Subjt:  IESLPNDLFIEVLAKVAAFSFTDLIQAKLATKEFLKASSHGYIFQHASLRNFQKLLWNNNPEFWSFMEKCNNNGNPETLYQKGMFEFFTHCREASGMAYL

Query:  KLSAQKGYPEACYVYGIIL
          +A+KG  EA YVYG+IL
Subjt:  KLSAQKGYPEACYVYGIIL

Arabidopsis top hitse value%identityAlignment
AT1G67623.1 F-box family protein4.7e-1736.13Show/hide
Query:  IESLPNDLFIEVLAKVAAFSFTDLIQAKLATKEFLKASSHGYIFQHASLRNFQKLLWNNNPEFWSFMEKCNNNGNPETLYQKGMFEFFTHCREASGMAYL
        ++SLP DL +E+ +   A S + +   +L +K F +     Y+F   SL+  + L W+ N     F+E+C  + NPE L+QKG   +F    +  G+ YL
Subjt:  IESLPNDLFIEVLAKVAAFSFTDLIQAKLATKEFLKASSHGYIFQHASLRNFQKLLWNNNPEFWSFMEKCNNNGNPETLYQKGMFEFFTHCREASGMAYL

Query:  KLSAQKGYPEACYVYGIIL
          +A+KG  EA YVYG+IL
Subjt:  KLSAQKGYPEACYVYGIIL

AT1G74875.1 FUNCTIONS IN: molecular_function unknown9.2e-1333.33Show/hide
Query:  IEVLAKVAAFSFTDLIQAKLATKEFLKASSHGYIFQHASLRNFQKLLWNNNPEFWSFMEKCNNNGNPETLYQKGMFEFF---THCREAS-GMAYLKLSAQ
        I ++  V + S ++    +L +K F + S+  YI Q  SL     L W N  +F +F ++C  +GN E +Y+KG+ ++F   +H R+   G+ ++  +A 
Subjt:  IEVLAKVAAFSFTDLIQAKLATKEFLKASSHGYIFQHASLRNFQKLLWNNNPEFWSFMEKCNNNGNPETLYQKGMFEFF---THCREAS-GMAYLKLSAQ

Query:  KGYPEACYVYGIIL
         G  EA YVYG+IL
Subjt:  KGYPEACYVYGIIL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGGTTCCTTGAAACGAAAATCTCAAGCTCTTGACTCTCAAATTTCAAGGTACGTTAGCTTAATTTTTGCATGCATGATAACCAAGATGGTGCGTTTCAGTGATTT
TCCACCGACCATAGAATCACTCCCAAACGATTTATTCATCGAAGTTCTGGCAAAAGTTGCCGCTTTTTCATTCACGGATTTAATCCAAGCCAAATTAGCCACCAAGGAAT
TTCTCAAAGCATCAAGTCATGGCTACATATTCCAGCACGCGTCCCTTAGAAACTTCCAAAAACTTCTATGGAACAACAACCCAGAGTTTTGGTCGTTCATGGAAAAATGC
AACAATAACGGAAATCCAGAGACTCTATACCAGAAGGGAATGTTTGAATTCTTCACTCATTGTAGAGAAGCTTCTGGAATGGCATATTTAAAGCTTTCTGCCCAAAAAGG
CTACCCAGAAGCTTGTTACGTATACGGCATCATTTTGTACGCAGCGAGTTTGGAGGATGAGGGAGTGAAATTCTTGAAGATTTGTGAGGCAAAATTAGGGTTTAAATTGG
CTGAATGTCGTCGGAGAGTTAAGGAATTTGTTCGTTATCTTTGGGTTAAGAACAAGATTTCTTTGTTGGAAAAGGATTCCAGTGATCAGAGGGGCTGTGAGAGTGTGGTT
AAGAATTGTTATAAGAAGAACGTGAGAAGAATTGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGGTTCCTTGAAACGAAAATCTCAAGCTCTTGACTCTCAAATTTCAAGGTACGTTAGCTTAATTTTTGCATGCATGATAACCAAGATGGTGCGTTTCAGTGATTT
TCCACCGACCATAGAATCACTCCCAAACGATTTATTCATCGAAGTTCTGGCAAAAGTTGCCGCTTTTTCATTCACGGATTTAATCCAAGCCAAATTAGCCACCAAGGAAT
TTCTCAAAGCATCAAGTCATGGCTACATATTCCAGCACGCGTCCCTTAGAAACTTCCAAAAACTTCTATGGAACAACAACCCAGAGTTTTGGTCGTTCATGGAAAAATGC
AACAATAACGGAAATCCAGAGACTCTATACCAGAAGGGAATGTTTGAATTCTTCACTCATTGTAGAGAAGCTTCTGGAATGGCATATTTAAAGCTTTCTGCCCAAAAAGG
CTACCCAGAAGCTTGTTACGTATACGGCATCATTTTGTACGCAGCGAGTTTGGAGGATGAGGGAGTGAAATTCTTGAAGATTTGTGAGGCAAAATTAGGGTTTAAATTGG
CTGAATGTCGTCGGAGAGTTAAGGAATTTGTTCGTTATCTTTGGGTTAAGAACAAGATTTCTTTGTTGGAAAAGGATTCCAGTGATCAGAGGGGCTGTGAGAGTGTGGTT
AAGAATTGTTATAAGAAGAACGTGAGAAGAATTGGATGA
Protein sequenceShow/hide protein sequence
MAGSLKRKSQALDSQISRYVSLIFACMITKMVRFSDFPPTIESLPNDLFIEVLAKVAAFSFTDLIQAKLATKEFLKASSHGYIFQHASLRNFQKLLWNNNPEFWSFMEKC
NNNGNPETLYQKGMFEFFTHCREASGMAYLKLSAQKGYPEACYVYGIILYAASLEDEGVKFLKICEAKLGFKLAECRRRVKEFVRYLWVKNKISLLEKDSSDQRGCESVV
KNCYKKNVRRIG