; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G013920 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G013920
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionNADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6
Genome locationCmo_Chr04:7079597..7082972
RNA-Seq ExpressionCmoCh04G013920
SyntenyCmoCh04G013920
Gene Ontology termsGO:0006979 - response to oxidative stress (biological process)
GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsIPR008011 - Complex 1 LYR protein
IPR016488 - NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 6


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601118.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6, partial [Cucurbita argyrosperma subsp. sororia]4.5e-6799.24Show/hide
Query:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMNIYNLDDVTTTSQIRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
        MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMNIYNLDDVTT+SQIRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMNIYNLDDVTTTSQIRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGREGLVQDVGSKDQGISNFLKNFYKSNYF
        YVVGREGLVQDVGSKDQGISNFLKNFYKSNYF
Subjt:  YVVGREGLVQDVGSKDQGISNFLKNFYKSNYF

XP_022957489.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Cucurbita moschata]1.6e-67100Show/hide
Query:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMNIYNLDDVTTTSQIRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
        MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMNIYNLDDVTTTSQIRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMNIYNLDDVTTTSQIRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGREGLVQDVGSKDQGISNFLKNFYKSNYF
        YVVGREGLVQDVGSKDQGISNFLKNFYKSNYF
Subjt:  YVVGREGLVQDVGSKDQGISNFLKNFYKSNYF

XP_022985413.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Cucurbita maxima]2.9e-6698.48Show/hide
Query:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMNIYNLDDVTTTSQIRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
        MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMNIYNLDDVTT S IRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMNIYNLDDVTTTSQIRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGREGLVQDVGSKDQGISNFLKNFYKSNYF
        YVVGREGLVQDVGSKDQGISNFLKNFYKSNYF
Subjt:  YVVGREGLVQDVGSKDQGISNFLKNFYKSNYF

XP_023552714.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Cucurbita pepo subsp. pepo]2.9e-6698.48Show/hide
Query:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMNIYNLDDVTTTSQIRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
        MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIM+IYNLDDVTT SQIRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMNIYNLDDVTTTSQIRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGREGLVQDVGSKDQGISNFLKNFYKSNYF
        YVVGREGLVQDVGSKDQGISNFLKNFYKSNYF
Subjt:  YVVGREGLVQDVGSKDQGISNFLKNFYKSNYF

XP_038892169.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Benincasa hispida]1.9e-6596.21Show/hide
Query:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMNIYNLDDVTTTSQIRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
        MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIM+IYNLDDVTT SQ+RSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMNIYNLDDVTTTSQIRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGREGLVQDVGSKDQGISNFLKNFYKSNYF
        YVVGREGLVQD+G+KDQGISNFLKNFYKSNYF
Subjt:  YVVGREGLVQDVGSKDQGISNFLKNFYKSNYF

TrEMBL top hitse value%identityAlignment
A0A0A0KRV0 Uncharacterized protein1.2e-6292.42Show/hide
Query:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMNIYNLDDVTTTSQIRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
        MAFTVRGLKVPPNSASLEEAR+RVFDFFRSACRSLPAIM+IYNLDDV T SQ+RS IASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMNIYNLDDVTTTSQIRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGREGLVQDVGSKDQGISNFLKNFYKSNYF
        YV+GREGLVQD G+KDQG SNFLKNFYKSNYF
Subjt:  YVVGREGLVQDVGSKDQGISNFLKNFYKSNYF

A0A1S3BH79 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 67.8e-6594.7Show/hide
Query:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMNIYNLDDVTTTSQIRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
        MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIM+IYNLDDVTT SQ+RSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMNIYNLDDVTTTSQIRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGREGLVQDVGSKDQGISNFLKNFYKSNYF
        YVVGREGLVQD G+KDQG+SNFLKNFY+SNYF
Subjt:  YVVGREGLVQDVGSKDQGISNFLKNFYKSNYF

A0A6J1CBT6 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 64.0e-6188.64Show/hide
Query:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMNIYNLDDVTTTSQIRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
        MAFT R LKVPPNSASLEEARNRVFDFFRSACRSLP IM+IYNLDDV T SQ+RS++AS+IRKNSH+ DPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMNIYNLDDVTTTSQIRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGREGLVQDVGSKDQGISNFLKNFYKSNYF
        YVVG EGLVQD+G+KDQGISNFLKNFYKSNYF
Subjt:  YVVGREGLVQDVGSKDQGISNFLKNFYKSNYF

A0A6J1H232 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 67.5e-68100Show/hide
Query:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMNIYNLDDVTTTSQIRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
        MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMNIYNLDDVTTTSQIRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMNIYNLDDVTTTSQIRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGREGLVQDVGSKDQGISNFLKNFYKSNYF
        YVVGREGLVQDVGSKDQGISNFLKNFYKSNYF
Subjt:  YVVGREGLVQDVGSKDQGISNFLKNFYKSNYF

A0A6J1JDJ2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 61.4e-6698.48Show/hide
Query:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMNIYNLDDVTTTSQIRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
        MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMNIYNLDDVTT S IRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMNIYNLDDVTTTSQIRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGREGLVQDVGSKDQGISNFLKNFYKSNYF
        YVVGREGLVQDVGSKDQGISNFLKNFYKSNYF
Subjt:  YVVGREGLVQDVGSKDQGISNFLKNFYKSNYF

SwissProt top hitse value%identityAlignment
P56556 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 68.4e-0835.23Show/hide
Query:  PPNSASLEEARNRVFDFFRSACRSLPAIMNIYNLDDVTTTSQIRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHII
        P  S  + EA+ RV + +R+  R +P  ++ + LD   T    R  +     KN+HVTDP+V+D+L+ KG  EL    +  KQR H++
Subjt:  PPNSASLEEARNRVFDFFRSACRSLPAIMNIYNLDDVTTTSQIRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHII

Q02366 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 67.6e-0934.09Show/hide
Query:  PPNSASLEEARNRVFDFFRSACRSLPAIMNIYNLDDVTTTSQIRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHII
        P  S  + EA+ RV + +R+  R +P  ++++ LD   +  Q R  +    +KN+H+TDP+V+D+L+ KG  EL    +  KQR H++
Subjt:  PPNSASLEEARNRVFDFFRSACRSLPAIMNIYNLDDVTTTSQIRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHII

Q0MQA4 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 68.4e-0835.23Show/hide
Query:  PPNSASLEEARNRVFDFFRSACRSLPAIMNIYNLDDVTTTSQIRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHII
        P  S  + EA+ RV + +R+  R +P  ++ + LD   T    R  +     KN+HVTDP+V+D+L+ KG  EL    +  KQR H++
Subjt:  PPNSASLEEARNRVFDFFRSACRSLPAIMNIYNLDDVTTTSQIRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHII

Q9CQZ5 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 67.6e-0937.5Show/hide
Query:  PPNSASLEEARNRVFDFFRSACRSLPAIMNIYNLDDVTTTSQIRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHII
        P  S  L EA+ RV + +R+  R +P  +++  LD   T  Q R  +     KN+HVTDP+V+D+L+ KG  EL    +  KQR H++
Subjt:  PPNSASLEEARNRVFDFFRSACRSLPAIMNIYNLDDVTTTSQIRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHII

Q9LHI0 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 63.7e-4870Show/hide
Query:  FTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMNIYNLDDVTTTSQIRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYV
        F +R + VPPNSA+L EAR RVFDFFR+ACRS+P IM+IYNL DV   SQ+R  I+++IR N+H+TDPKVID+L+FKGMEEL +I +HAKQRHHIIGQYV
Subjt:  FTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMNIYNLDDVTTTSQIRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYV

Query:  VGREGLVQDVGSKDQGISNFLKNFYKSNYF
        VG EGLVQ+ G+KDQG ++FLKNFY SNYF
Subjt:  VGREGLVQDVGSKDQGISNFLKNFYKSNYF

Arabidopsis top hitse value%identityAlignment
AT3G12260.1 LYR family of Fe/S cluster biogenesis protein2.7e-4970Show/hide
Query:  FTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMNIYNLDDVTTTSQIRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYV
        F +R + VPPNSA+L EAR RVFDFFR+ACRS+P IM+IYNL DV   SQ+R  I+++IR N+H+TDPKVID+L+FKGMEEL +I +HAKQRHHIIGQYV
Subjt:  FTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMNIYNLDDVTTTSQIRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYV

Query:  VGREGLVQDVGSKDQGISNFLKNFYKSNYF
        VG EGLVQ+ G+KDQG ++FLKNFY SNYF
Subjt:  VGREGLVQDVGSKDQGISNFLKNFYKSNYF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTTCACAGTTCGAGGTCTGAAGGTTCCGCCCAACTCCGCCAGTCTGGAAGAAGCCCGGAATCGAGTCTTCGACTTCTTCAGATCAGCATGTAGATCCTTG
CCTGCAATCATGAACATCTATAACTTAGACGATGTCACTACTACTTCTCAGATCCGCTCTACCATCGCCTCCGAGATCCGCAAGAATTCCCACGTTACGGACCCT
AAGGTGATTGACATGCTTCTTTTCAAGGGCATGGAAGAGCTCGGTAACATTACCGAACATGCAAAGCAACGGCATCACATCATTGGTCAGTATGTGGTTGGTCGC
GAAGGACTCGTGCAAGATGTGGGTTCCAAGGATCAGGGCATATCCAATTTTCTCAAAAACTTCTACAAGAGTAACTACTTTTGA
mRNA sequenceShow/hide mRNA sequence
TTGCTCTTATATATAAACCAGGCGCGTGGGAGGCTGCGAGGAGTAGCGCGAACAGCAATAGCCGAACGAGTTCACTCATTGAGTTGGCGAAGGCAGAGAGAAGAA
CTCAGAAAAAATGGCGTTCACAGTTCGAGGTCTGAAGGTTCCGCCCAACTCCGCCAGTCTGGAAGAAGCCCGGAATCGAGTCTTCGACTTCTTCAGATCAGCATG
TAGATCCTTGCCTGCAATCATGAACATCTATAACTTAGACGATGTCACTACTACTTCTCAGATCCGCTCTACCATCGCCTCCGAGATCCGCAAGAATTCCCACGT
TACGGACCCTAAGGTGATTGACATGCTTCTTTTCAAGGGCATGGAAGAGCTCGGTAACATTACCGAACATGCAAAGCAACGGCATCACATCATTGGTCAGTATGT
GGTTGGTCGCGAAGGACTCGTGCAAGATGTGGGTTCCAAGGATCAGGGCATATCCAATTTTCTCAAAAACTTCTACAAGAGTAACTACTTTTGAACTCCATCCTT
CCTTGAATATGAAACATCCATAGTTTTTATTTGTGATCTTGAGAAATAATGAAGAAACTATGTGTTCTCTGGACAATGAACACTCCTATTTGATCGTTTTGTTGG
ATTGAATTGTTGGTATGTTATGACCGCTGTATCTTTTACAGAAGCAAAGCAATCCAAGATCTTTGGTTCTATTTACACCGTTTTTAATTATCAAGCCCAAATGGT
TGTCTACTCTAGCTTTAGTTCCAGTTGTCTTCGTTTTATCACTGGCATGTTTATAAGTTCTAATCATTATCAAGAT
Protein sequenceShow/hide protein sequence
MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMNIYNLDDVTTTSQIRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGR
EGLVQDVGSKDQGISNFLKNFYKSNYF