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CmoCh04G013960 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G013960
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionauxin-regulated gene involved in organ size
Genome locationCmo_Chr04:7114467..7114664
RNA-Seq ExpressionCmoCh04G013960
SyntenyCmoCh04G013960
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG2372512.1 uncharacterized protein HKW66_Vig0206190 [Vigna angularis]2.4e-1378.95Show/hide
Query:  MVRCFNLVSIFVLAAVAVSMVVLPLVLPPLPPPPIVLLFFPVGLMAALLILAFSPSD
        MVRCF+L S+ +LAA+A SMVVLPL+LPPLPPPP+VLLFFPVG+MAAL++LAFSPSD
Subjt:  MVRCFNLVSIFVLAAVAVSMVVLPLVLPPLPPPPIVLLFFPVGLMAALLILAFSPSD

KAG4989130.1 hypothetical protein JHK85_032113 [Glycine max]7.0e-1378.95Show/hide
Query:  MVRCFNLVSIFVLAAVAVSMVVLPLVLPPLPPPPIVLLFFPVGLMAALLILAFSPSD
        M RCF L S+ VLAA+A SMVVLPL+LPPLPPPP+VLLFFPVG+MAAL++LAFSPSD
Subjt:  MVRCFNLVSIFVLAAVAVSMVVLPLVLPPLPPPPIVLLFFPVGLMAALLILAFSPSD

KAG6601123.1 Transcription factor IIIA, partial [Cucurbita argyrosperma subsp. sororia]1.4e-2198.46Show/hide
Query:  MVRCFNLVSIFVLAAVAVSMVVLPLVLPPLPPPPIVLLFFPVGLMAALLILAFSPSDVGVDNFDL
        MVRCFNLVSIFVLAAVAVSMVVL LVLPPLPPPPIVLLFFPVGLMAALLILAFSPSDVGVDNFDL
Subjt:  MVRCFNLVSIFVLAAVAVSMVVLPLVLPPLPPPPIVLLFFPVGLMAALLILAFSPSDVGVDNFDL

RZB80655.1 hypothetical protein D0Y65_030376 [Glycine soja]7.0e-1378.95Show/hide
Query:  MVRCFNLVSIFVLAAVAVSMVVLPLVLPPLPPPPIVLLFFPVGLMAALLILAFSPSD
        M RCF L S+ VLAA+A SMVVLPL+LPPLPPPP+VLLFFPVG+MAAL++LAFSPSD
Subjt:  MVRCFNLVSIFVLAAVAVSMVVLPLVLPPLPPPPIVLLFFPVGLMAALLILAFSPSD

XP_007148923.1 hypothetical protein PHAVU_005G025500g [Phaseolus vulgaris]2.4e-1378.95Show/hide
Query:  MVRCFNLVSIFVLAAVAVSMVVLPLVLPPLPPPPIVLLFFPVGLMAALLILAFSPSD
        MVRCF+L S+ +LAA+A SMVVLPL+LPPLPPPP+VLLFFPVG+MAAL++LAFSPSD
Subjt:  MVRCFNLVSIFVLAAVAVSMVVLPLVLPPLPPPPIVLLFFPVGLMAALLILAFSPSD

TrEMBL top hitse value%identityAlignment
A0A0L9UI81 Uncharacterized protein1.2e-1378.95Show/hide
Query:  MVRCFNLVSIFVLAAVAVSMVVLPLVLPPLPPPPIVLLFFPVGLMAALLILAFSPSD
        MVRCF+L S+ +LAA+A SMVVLPL+LPPLPPPP+VLLFFPVG+MAAL++LAFSPSD
Subjt:  MVRCFNLVSIFVLAAVAVSMVVLPLVLPPLPPPPIVLLFFPVGLMAALLILAFSPSD

A0A0S3SKI1 Uncharacterized protein1.2e-1378.95Show/hide
Query:  MVRCFNLVSIFVLAAVAVSMVVLPLVLPPLPPPPIVLLFFPVGLMAALLILAFSPSD
        MVRCF+L S+ +LAA+A SMVVLPL+LPPLPPPP+VLLFFPVG+MAAL++LAFSPSD
Subjt:  MVRCFNLVSIFVLAAVAVSMVVLPLVLPPLPPPPIVLLFFPVGLMAALLILAFSPSD

A0A445I3P0 Uncharacterized protein3.4e-1378.95Show/hide
Query:  MVRCFNLVSIFVLAAVAVSMVVLPLVLPPLPPPPIVLLFFPVGLMAALLILAFSPSD
        M RCF L S+ VLAA+A SMVVLPL+LPPLPPPP+VLLFFPVG+MAAL++LAFSPSD
Subjt:  MVRCFNLVSIFVLAAVAVSMVVLPLVLPPLPPPPIVLLFFPVGLMAALLILAFSPSD

K7K5P8 Uncharacterized protein3.4e-1378.95Show/hide
Query:  MVRCFNLVSIFVLAAVAVSMVVLPLVLPPLPPPPIVLLFFPVGLMAALLILAFSPSD
        M RCF L S+ VLAA+A SMVVLPL+LPPLPPPP+VLLFFPVG+MAAL++LAFSPSD
Subjt:  MVRCFNLVSIFVLAAVAVSMVVLPLVLPPLPPPPIVLLFFPVGLMAALLILAFSPSD

V7BSD6 Uncharacterized protein1.2e-1378.95Show/hide
Query:  MVRCFNLVSIFVLAAVAVSMVVLPLVLPPLPPPPIVLLFFPVGLMAALLILAFSPSD
        MVRCF+L S+ +LAA+A SMVVLPL+LPPLPPPP+VLLFFPVG+MAAL++LAFSPSD
Subjt:  MVRCFNLVSIFVLAAVAVSMVVLPLVLPPLPPPPIVLLFFPVGLMAALLILAFSPSD

SwissProt top hitse value%identityAlignment
C7SFP6 Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE1.6e-0755.77Show/hide
Query:  FNLVSIFVLAAVAVSMVVLPLVLPPLPPPPIVLLFFPVGLMAALLILAFSPS
        F+L S+ +L  +  S+++LPLVLPPLPPPP +LL  P+G+M  L+ILAF PS
Subjt:  FNLVSIFVLAAVAVSMVVLPLVLPPLPPPPIVLLFFPVGLMAALLILAFSPS

Q6NMD6 Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE2.4e-0850.82Show/hide
Query:  FNLVSIFVLAAVAVSMVVLPLVLPPLPPPPIVLLFFPVGLMAALLILAFSPSDVGVDNFDL
        F+L S+F+L  +  S+++LPLVLPPLPPPP +LL  P+G+M  L++LAF PS     N D+
Subjt:  FNLVSIFVLAAVAVSMVVLPLVLPPLPPPPIVLLFFPVGLMAALLILAFSPSDVGVDNFDL

Q7X6L2 Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE1.1e-0551.92Show/hide
Query:  FNLVSIFVLAAVAVSMVVLPLVLPPLPPPPIVLLFFPVGLMAALLILAFSPS
        F++ S+ +L  V  S+V+LPLVLPPLPPPP +L+  PV ++  LL LAF P+
Subjt:  FNLVSIFVLAAVAVSMVVLPLVLPPLPPPPIVLLFFPVGLMAALLILAFSPS

Q8RXL7 ARGOS-like protein2.1e-0753.85Show/hide
Query:  FNLVSIFVLAAVAVSMVVLPLVLPPLPPPPIVLLFFPVGLMAALLILAFSPS
        F+L S+ VL  +  S+++LPL+LPPLPPPP +LL  P+G+M  L++LAF PS
Subjt:  FNLVSIFVLAAVAVSMVVLPLVLPPLPPPPIVLLFFPVGLMAALLILAFSPS

Arabidopsis top hitse value%identityAlignment
AT2G41225.1 unknown protein8.3e-0455.81Show/hide
Query:  IFVLAAVAVSMVVLPLVLPPLPPPPIVLLFFPVGLMAALLILA
        +FV+  V V + VLP VLPPLPPPP++L+  PV LM  L+ LA
Subjt:  IFVLAAVAVSMVVLPLVLPPLPPPPIVLLFFPVGLMAALLILA

AT2G41230.1 unknown protein2.2e-0448.98Show/hide
Query:  SIFVLAAVAVSMVVLPLVLPPLPPPPIVLLFFPVGLMAALLILAFSPSD
        S+ +L  +++ +++LP  LPPLPPPP  LL  P+ LM  L+ LAFSPS+
Subjt:  SIFVLAAVAVSMVVLPLVLPPLPPPPIVLLFFPVGLMAALLILAFSPSD

AT2G44080.1 ARGOS-like1.5e-0853.85Show/hide
Query:  FNLVSIFVLAAVAVSMVVLPLVLPPLPPPPIVLLFFPVGLMAALLILAFSPS
        F+L S+ VL  +  S+++LPL+LPPLPPPP +LL  P+G+M  L++LAF PS
Subjt:  FNLVSIFVLAAVAVSMVVLPLVLPPLPPPPIVLLFFPVGLMAALLILAFSPS

AT3G59900.1 auxin-regulated gene involved in organ size1.7e-0950.82Show/hide
Query:  FNLVSIFVLAAVAVSMVVLPLVLPPLPPPPIVLLFFPVGLMAALLILAFSPSDVGVDNFDL
        F+L S+F+L  +  S+++LPLVLPPLPPPP +LL  P+G+M  L++LAF PS     N D+
Subjt:  FNLVSIFVLAAVAVSMVVLPLVLPPLPPPPIVLLFFPVGLMAALLILAFSPSDVGVDNFDL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTACGTTGCTTCAATTTAGTGTCCATTTTCGTCCTCGCCGCCGTTGCGGTCTCGATGGTAGTTCTGCCCTTGGTTCTTCCGCCGCTGCCTCCCCCTCCGATTGTGCT
TCTCTTCTTTCCGGTTGGACTCATGGCGGCGCTCCTCATCCTCGCCTTTTCTCCCTCCGATGTCGGCGTCGATAATTTCGATTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTACGTTGCTTCAATTTAGTGTCCATTTTCGTCCTCGCCGCCGTTGCGGTCTCGATGGTAGTTCTGCCCTTGGTTCTTCCGCCGCTGCCTCCCCCTCCGATTGTGCT
TCTCTTCTTTCCGGTTGGACTCATGGCGGCGCTCCTCATCCTCGCCTTTTCTCCCTCCGATGTCGGCGTCGATAATTTCGATTTATGA
Protein sequenceShow/hide protein sequence
MVRCFNLVSIFVLAAVAVSMVVLPLVLPPLPPPPIVLLFFPVGLMAALLILAFSPSDVGVDNFDL