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CmoCh04G014080 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G014080
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptioncytochrome c oxidase assembly factor 5
Genome locationCmo_Chr04:7179607..7180078
RNA-Seq ExpressionCmoCh04G014080
SyntenyCmoCh04G014080
Gene Ontology termsNA
InterPro domainsIPR018793 - Cytochrome c oxidase assembly protein PET191


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34196.1 hypothetical protein [Cucumis melo subsp. melo]1.0e-2064.04Show/hide
Query:  MSKSCKGLAMELVKCLSESDCVKVLYNHLLSVFVCLYVCACADMYLINYTVLMNVQNRTYKECAGEKSPCIPSECVGLRETYFNCKRGQ
        MSKSCKGLAMELVKCLSESDCVK                               VQNRTY+ECAGEKSPCIPSECVGLRETYFNCKRGQ
Subjt:  MSKSCKGLAMELVKCLSESDCVKVLYNHLLSVFVCLYVCACADMYLINYTVLMNVQNRTYKECAGEKSPCIPSECVGLRETYFNCKRGQ

KAG7031931.1 hypothetical protein SDJN02_05973 [Cucurbita argyrosperma subsp. argyrosperma]5.4e-2567.01Show/hide
Query:  MSKSCKGLAMELVKCLSESDCVKVLYNHLLSVFVCLYVCACADMYLINYTVLMNVQNRTYKECAGEKSPCIPSECVGLRETYFNCKRGQASYRELLL
        MSKSCKGLAMELVKCLSESDCVK                               VQNRTYKECAGEKSPCIPSECVGLRETYFNCKRGQAS+RELLL
Subjt:  MSKSCKGLAMELVKCLSESDCVKVLYNHLLSVFVCLYVCACADMYLINYTVLMNVQNRTYKECAGEKSPCIPSECVGLRETYFNCKRGQASYRELLL

RDX68455.1 hypothetical protein CR513_52559, partial [Mucuna pruriens]1.8e-2059.78Show/hide
Query:  MSKSCKGLAMELVKCLSESDCVKVLYNHLLSVFVCLYVCACADMYLINYTVLMNVQNRTYKECAGEKSPCIPSECVGLRETYFNCKRGQASY
        MSKSCKGLA ELVKCLSESDCVKV +                            V+ R+Y+EC GEKSPCIPSECVGLRETYFNCKRGQAS+
Subjt:  MSKSCKGLAMELVKCLSESDCVKVLYNHLLSVFVCLYVCACADMYLINYTVLMNVQNRTYKECAGEKSPCIPSECVGLRETYFNCKRGQASY

XP_008446948.1 PREDICTED: cytochrome c oxidase assembly factor 5 [Cucumis melo]2.7e-2162.37Show/hide
Query:  MSKSCKGLAMELVKCLSESDCVKVLYNHLLSVFVCLYVCACADMYLINYTVLMNVQNRTYKECAGEKSPCIPSECVGLRETYFNCKRGQASYR
        MSKSCKGLAMELVKCLSESDCVK                               VQNRTY+ECAGEKSPCIPSECVGLRETYFNCKRGQ   R
Subjt:  MSKSCKGLAMELVKCLSESDCVKVLYNHLLSVFVCLYVCACADMYLINYTVLMNVQNRTYKECAGEKSPCIPSECVGLRETYFNCKRGQASYR

XP_022956695.1 cytochrome c oxidase assembly factor 5 [Cucurbita moschata]1.2e-2163.44Show/hide
Query:  MSKSCKGLAMELVKCLSESDCVKVLYNHLLSVFVCLYVCACADMYLINYTVLMNVQNRTYKECAGEKSPCIPSECVGLRETYFNCKRGQASYR
        MSKSCKGLAMELVKCLSESDCVK                               VQNRTYKECAGEKSPCIPSECVGLRETYFNCKRGQ   R
Subjt:  MSKSCKGLAMELVKCLSESDCVKVLYNHLLSVFVCLYVCACADMYLINYTVLMNVQNRTYKECAGEKSPCIPSECVGLRETYFNCKRGQASYR

TrEMBL top hitse value%identityAlignment
A0A0A0KRS4 Uncharacterized protein1.3e-2162.37Show/hide
Query:  MSKSCKGLAMELVKCLSESDCVKVLYNHLLSVFVCLYVCACADMYLINYTVLMNVQNRTYKECAGEKSPCIPSECVGLRETYFNCKRGQASYR
        MSKSCKGLAMELVKCLSESDCVK                               VQNRTY+ECAGEKSPCIPSECVGLRETYFNCKRGQ   R
Subjt:  MSKSCKGLAMELVKCLSESDCVKVLYNHLLSVFVCLYVCACADMYLINYTVLMNVQNRTYKECAGEKSPCIPSECVGLRETYFNCKRGQASYR

A0A1S3BGA9 cytochrome c oxidase assembly factor 51.3e-2162.37Show/hide
Query:  MSKSCKGLAMELVKCLSESDCVKVLYNHLLSVFVCLYVCACADMYLINYTVLMNVQNRTYKECAGEKSPCIPSECVGLRETYFNCKRGQASYR
        MSKSCKGLAMELVKCLSESDCVK                               VQNRTY+ECAGEKSPCIPSECVGLRETYFNCKRGQ   R
Subjt:  MSKSCKGLAMELVKCLSESDCVKVLYNHLLSVFVCLYVCACADMYLINYTVLMNVQNRTYKECAGEKSPCIPSECVGLRETYFNCKRGQASYR

A0A6J1CDL1 cytochrome c oxidase assembly factor 51.3e-2162.37Show/hide
Query:  MSKSCKGLAMELVKCLSESDCVKVLYNHLLSVFVCLYVCACADMYLINYTVLMNVQNRTYKECAGEKSPCIPSECVGLRETYFNCKRGQASYR
        MSKSCKGLAMELVKCLSESDCVK                               VQNRTY+ECAGEKSPCIPSECVGLRETYFNCKRGQ   R
Subjt:  MSKSCKGLAMELVKCLSESDCVKVLYNHLLSVFVCLYVCACADMYLINYTVLMNVQNRTYKECAGEKSPCIPSECVGLRETYFNCKRGQASYR

A0A6J1GYH3 cytochrome c oxidase assembly factor 56.0e-2263.44Show/hide
Query:  MSKSCKGLAMELVKCLSESDCVKVLYNHLLSVFVCLYVCACADMYLINYTVLMNVQNRTYKECAGEKSPCIPSECVGLRETYFNCKRGQASYR
        MSKSCKGLAMELVKCLSESDCVK                               VQNRTYKECAGEKSPCIPSECVGLRETYFNCKRGQ   R
Subjt:  MSKSCKGLAMELVKCLSESDCVKVLYNHLLSVFVCLYVCACADMYLINYTVLMNVQNRTYKECAGEKSPCIPSECVGLRETYFNCKRGQASYR

A0A6J1IEJ6 cytochrome c oxidase assembly factor 56.0e-2263.44Show/hide
Query:  MSKSCKGLAMELVKCLSESDCVKVLYNHLLSVFVCLYVCACADMYLINYTVLMNVQNRTYKECAGEKSPCIPSECVGLRETYFNCKRGQASYR
        MSKSCKGLAMELVKCLSESDCVK                               VQNRTYKECAGEKSPCIPSECVGLRETYFNCKRGQ   R
Subjt:  MSKSCKGLAMELVKCLSESDCVKVLYNHLLSVFVCLYVCACADMYLINYTVLMNVQNRTYKECAGEKSPCIPSECVGLRETYFNCKRGQASYR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G10865.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase assembly protein PET191, N-terminal (InterPro:IPR018793); Has 241 Blast hits to 241 proteins in 124 species: Archae - 0; Bacteria - 0; Metazoa - 100; Fungi - 94; Plants - 38; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).4.7e-1951.61Show/hide
Query:  MSKSCKGLAMELVKCLSESDCVKVLYNHLLSVFVCLYVCACADMYLINYTVLMNVQNRTYKECAGEKSPCIPSECVGLRETYFNCKRGQASYR
        M+KSCKGLA ELVKCLSES CVK                                + R+ ++C GEKSPCIPSECVGLRETYFNCKRGQ   R
Subjt:  MSKSCKGLAMELVKCLSESDCVKVLYNHLLSVFVCLYVCACADMYLINYTVLMNVQNRTYKECAGEKSPCIPSECVGLRETYFNCKRGQASYR

AT1G10865.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase assembly protein PET191, N-terminal (InterPro:IPR018793); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).1.8e-1852.81Show/hide
Query:  MSKSCKGLAMELVKCLSESDCVKVLYNHLLSVFVCLYVCACADMYLINYTVLMNVQNRTYKECAGEKSPCIPSECVGLRETYFNCKRGQ
        M+KSCKGLA ELVKCLSES CVK                                + R+ ++C GEKSPCIPSECVGLRETYFNCKRGQ
Subjt:  MSKSCKGLAMELVKCLSESDCVKVLYNHLLSVFVCLYVCACADMYLINYTVLMNVQNRTYKECAGEKSPCIPSECVGLRETYFNCKRGQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAAGTCTTGCAAAGGTTTAGCGATGGAACTGGTCAAGTGTCTCAGCGAATCCGATTGTGTAAAGGTCTTGTATAATCATCTTCTCTCTGTATTTGTCTGTCTTTA
TGTGTGTGCGTGTGCAGACATGTATCTTATCAATTATACAGTATTAATGAATGTCCAGAACCGAACTTACAAGGAATGTGCTGGAGAGAAGAGTCCTTGCATTCCTAGCG
AATGCGTGGGATTAAGGGAAACATATTTCAATTGTAAAAGAGGCCAGGCAAGTTATCGTGAACTCCTTCTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGAAGTCTTGCAAAGGTTTAGCGATGGAACTGGTCAAGTGTCTCAGCGAATCCGATTGTGTAAAGGTCTTGTATAATCATCTTCTCTCTGTATTTGTCTGTCTTTA
TGTGTGTGCGTGTGCAGACATGTATCTTATCAATTATACAGTATTAATGAATGTCCAGAACCGAACTTACAAGGAATGTGCTGGAGAGAAGAGTCCTTGCATTCCTAGCG
AATGCGTGGGATTAAGGGAAACATATTTCAATTGTAAAAGAGGCCAGGCAAGTTATCGTGAACTCCTTCTCTAG
Protein sequenceShow/hide protein sequence
MSKSCKGLAMELVKCLSESDCVKVLYNHLLSVFVCLYVCACADMYLINYTVLMNVQNRTYKECAGEKSPCIPSECVGLRETYFNCKRGQASYRELLL