; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G014320 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G014320
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptiontetraspanin-6
Genome locationCmo_Chr04:7303063..7305457
RNA-Seq ExpressionCmoCh04G014320
SyntenyCmoCh04G014320
Gene Ontology termsGO:0009734 - auxin-activated signaling pathway (biological process)
GO:0009506 - plasmodesma (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR018499 - Tetraspanin/Peripherin
IPR044991 - Tetraspani, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601153.1 Tetraspanin-6, partial [Cucurbita argyrosperma subsp. sororia]1.7e-16799.65Show/hide
Query:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGG
        MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGG
Subjt:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGG

Query:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN
        GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN
Subjt:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN

Query:  LLCYECDSCKAGVLEDIRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY
        LLCYECDSCKAGVLED+RRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY
Subjt:  LLCYECDSCKAGVLEDIRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY

XP_022957333.1 tetraspanin-6 [Cucurbita moschata]1.3e-167100Show/hide
Query:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGG
        MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGG
Subjt:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGG

Query:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN
        GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN
Subjt:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN

Query:  LLCYECDSCKAGVLEDIRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY
        LLCYECDSCKAGVLEDIRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY
Subjt:  LLCYECDSCKAGVLEDIRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY

XP_022991334.1 tetraspanin-6 [Cucurbita maxima]8.3e-16798.95Show/hide
Query:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGG
        MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVML LIATLMGLTIFGFVVTGPGG
Subjt:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGG

Query:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN
        GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN
Subjt:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN

Query:  LLCYECDSCKAGVLEDIRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY
        LLCYECDSCKAGVLED+RRDWHKLSVLNVVVVVLLIGVYS+GCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY
Subjt:  LLCYECDSCKAGVLEDIRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY

XP_023544308.1 tetraspanin-6 [Cucurbita pepo subsp. pepo]2.0e-16598.61Show/hide
Query:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGG
        MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVML LIATLMGLTIFGFVVTGPGG
Subjt:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGG

Query:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMA--AGAVVAQDPDCYRWNNA
        GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMA  AGAVVAQDPDCYRWNNA
Subjt:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMA--AGAVVAQDPDCYRWNNA

Query:  PNLLCYECDSCKAGVLEDIRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY
        PNLLCYECDSCKAGVLED+RRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY
Subjt:  PNLLCYECDSCKAGVLEDIRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY

XP_038891767.1 tetraspanin-6 [Benincasa hispida]1.5e-16095.45Show/hide
Query:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGG
        MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVML LIATLMGLTIFGFVVTGPGG
Subjt:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGG

Query:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN
        G+EAPGGRVYREYHLEQYS WLRKR+KDPRYW+TIRSC+LGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMM   A+VAQDPDCYRWNNAPN
Subjt:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN

Query:  LLCYECDSCKAGVLEDIRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY
        LLCYECDSCKAGVLED+RRDWHKLSVLNVVVVVLLIGVY VGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDK+EQLY
Subjt:  LLCYECDSCKAGVLEDIRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY

TrEMBL top hitse value%identityAlignment
A0A0A0KTM6 Uncharacterized protein1.2e-15892.66Show/hide
Query:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGG
        MYRFSNT+IGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVML LIATLMGLTIFGF+VT  GG
Subjt:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGG

Query:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN
        GVEAPGGRVYREYHLEQYS WLRKR+KDPRYW+TIRSC+LGSKTCA+LASWTPLDYL+RDM+PIQSGCCKPPTACNYDMMAAGA+V+QDPDCYRWNNAP 
Subjt:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN

Query:  LLCYECDSCKAGVLEDIRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY
        LLCYECDSCKAGVLE++RRDWHKLSVLNVVVV+LLIGVY VGCCAFRNTKRAETDYPYGHN+MTKVRPRWDYYWWRWLHDK+EQLY
Subjt:  LLCYECDSCKAGVLEDIRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY

A0A1S3BFM9 tetraspanin-65.3e-15993.01Show/hide
Query:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGG
        MYRFSNT+IGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVML LIATLMGLTIFGF+VT  GG
Subjt:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGG

Query:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN
        GVEAPGGRVYREYHLEQYS WLRKR+KDPRYW+TIRSC+LGSKTCA+LASWTPLDYL+RDM+PIQSGCCKPPTACNYDMMAAGA+V+QDPDCYRWNNAP 
Subjt:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN

Query:  LLCYECDSCKAGVLEDIRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY
        LLCYECDSCKAGVLE++RRDWHKLSVLNVVVV+LLIGVY VGCCAFRNTKRAETDYPYGHN+MTKVRPRWDYYWWRWLHDKREQLY
Subjt:  LLCYECDSCKAGVLEDIRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY

A0A6J1CB91 tetraspanin-6-like isoform X26.0e-15591.61Show/hide
Query:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGG
        MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNV WALWVYLVVML LIATLMGLTIFGFVVTGPGG
Subjt:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGG

Query:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN
        GVEAPGGRVYREYHLE+YS WLR R+KDPRYW+TIRSC+LGS+TCAKLASWTPLDYLERDMTPIQSGCCKPPTACNY+     A+ AQDPDCYRWNNA N
Subjt:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN

Query:  LLCYECDSCKAGVLEDIRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY
        +LCYEC+SCKAGVLE +RRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAE+DYPYGHNRMTKVRPRWDYYWWRWLHDK+EQLY
Subjt:  LLCYECDSCKAGVLEDIRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY

A0A6J1GZW8 tetraspanin-66.2e-168100Show/hide
Query:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGG
        MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGG
Subjt:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGG

Query:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN
        GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN
Subjt:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN

Query:  LLCYECDSCKAGVLEDIRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY
        LLCYECDSCKAGVLEDIRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY
Subjt:  LLCYECDSCKAGVLEDIRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY

A0A6J1JUI8 tetraspanin-64.0e-16798.95Show/hide
Query:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGG
        MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVML LIATLMGLTIFGFVVTGPGG
Subjt:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGG

Query:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN
        GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN
Subjt:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN

Query:  LLCYECDSCKAGVLEDIRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY
        LLCYECDSCKAGVLED+RRDWHKLSVLNVVVVVLLIGVYS+GCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY
Subjt:  LLCYECDSCKAGVLEDIRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY

SwissProt top hitse value%identityAlignment
Q84WF6 Tetraspanin-52.2e-10160.28Show/hide
Query:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGG
        M R SNTVIGFLN+ TLI+SI ++G  LWM RS TTCE FLQ PLL++G  +L++S+AG +GAC +VAW LWVYL  M+ +I  LMGLT+FGF+VT   G
Subjt:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGG

Query:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN
        GV    GRVY+E+ LE Y  WL+ RV D  YWVTI++C+LGS TC+KLA WTPLDYL++D++P+QSGCCKPPT+C Y+      V+ QDPDCYRWNNA  
Subjt:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN

Query:  LLCYECDSCKAGVLEDIRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAE-TDYPYGHNRMTKVRPRWDYYWWRWLHDK
        +LCY+CD+C+AGVLE +RRDWHKLS++NV+VV+ LI VY VGCCAF+N KR +   +PYG   M+K RP W+  W RW H +
Subjt:  LLCYECDSCKAGVLEDIRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAE-TDYPYGHNRMTKVRPRWDYYWWRWLHDK

Q8S8Q6 Tetraspanin-82.2e-6144.15Show/hide
Query:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMA-RSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPG
        M R SN ++G LN    + SIPI+ GG+W++ + ST CE FL  P++ +G  ++VV++AG IG+C  V W LWVYL VM +LI  +  +T+F FVVT  G
Subjt:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMA-RSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPG

Query:  GGVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASW---TPLD-YLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQ------D
         G EA  G+ Y+EY L  YS WL+KRV++ + W  IRSC++ SK C+KL +     P++ + +  +T +QSGCCKP   C ++ +              +
Subjt:  GGVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASW---TPLD-YLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQ------D

Query:  PDCYRWNNAPNLLCYECDSCKAGVLEDIRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAET
        PDC  W+NA   LC++C SCKAG+L++++  W K++++N+V +V LI VYSVGCCAFRN KR ++
Subjt:  PDCYRWNNAPNLLCYECDSCKAGVLEDIRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAET

Q9C7C1 Tetraspanin-63.0e-11970.73Show/hide
Query:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGG
        MYRFSNTVIG LNL TL+ASIPIIG  L+ ARSSTTCE+FLQTPLLV+GF++L+VSLAGFIGACFNVAWALWVYLVVM+ LIATLMGLT+FG VVT  GG
Subjt:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGG

Query:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN
        GVE P GR+Y+EY L  Y  WLR+RV+DP YW +IRSC+L SKTC K+ SWT LDY +RDMT +QSGCCKPPTAC Y+      VV    DC+RWNN   
Subjt:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN

Query:  LLCYECDSCKAGVLEDIRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAETDY-PYGHNRMTKVRPRWDYYWWRWLHDKREQLY
        +LCYECD+CKAGVLE+IR DW KLSV+N++V+VLLI VY+ GCCAF NT+ A   Y P   NRMT+VRPRWDYYWWRW H+K+EQLY
Subjt:  LLCYECDSCKAGVLEDIRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAETDY-PYGHNRMTKVRPRWDYYWWRWLHDKREQLY

Q9LSS4 Tetraspanin-43.6e-6443.88Show/hide
Query:  RFSNTVIGFLNLFTLIASIPIIGGGLWMA--RSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGG
        R  + +IG +N FT + SIPI+GGG+W++   +ST C  FLQ PL+++G  ++V+SLAG  GAC+   + +W+YL  M  +IA L+G TIF +VVT  G 
Subjt:  RFSNTVIGFLNLFTLIASIPIIGGGLWMA--RSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGG

Query:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKL------ASWTPLDYLERDMTPIQSGCCKPPTACNYD------MMAAGAVVAQ
        G      R Y +Y+L  YSGWL+ RV D  YW  I SCV  S  C K+         T   +  R+++P++SGCCKPPT C Y        +  G +V  
Subjt:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKL------ASWTPLDYLERDMTPIQSGCCKPPTACNYD------MMAAGAVVAQ

Query:  DPDCYRWNNAPNLLCYECDSCKAGVLEDIRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAETDYPYGHNRMTKV
        +PDC  WNN   LLCY+C SCKAGVL  +++ W K+SV+N+VVV++L+  Y + C A++N KR   D P G  RMT +
Subjt:  DPDCYRWNNAPNLLCYECDSCKAGVLEDIRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAETDYPYGHNRMTKV

Q9M1E7 Tetraspanin-32.1e-6443.93Show/hide
Query:  RFSNTVIGFLNLFTLIASIPIIGGGLWMA--RSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGG
        R SN +IG +N  T + SIPI+GGG+W++   +ST C  FLQ PL+V+G  ++VVSLAGF GAC+   + +W+YLVVML++IA L+G  IF + VT  G 
Subjt:  RFSNTVIGFLNLFTLIASIPIIGGGLWMA--RSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGG

Query:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKL------ASWTPLDYLERDMTPIQSGCCKPPTACNYDMM------AAGAVVAQ
        G      R Y +Y+LE YSGWL+ RV D  YW  I SC+  S  C K+         T   +  R ++P++SGCCKPPT C +  +        G ++  
Subjt:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKL------ASWTPLDYLERDMTPIQSGCCKPPTACNYDMM------AAGAVVAQ

Query:  DPDCYRWNNAPNLLCYECDSCKAGVLEDIRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAETDYPYGHNRMTKVRP
        + DC  W+N  ++LCY+C SCKAGVL  +++ W K+SV+N+VV+++L+  Y +   A+RN KR + D P G  RMTK  P
Subjt:  DPDCYRWNNAPNLLCYECDSCKAGVLEDIRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAETDYPYGHNRMTKVRP

Arabidopsis top hitse value%identityAlignment
AT2G23810.1 tetraspanin81.6e-6244.15Show/hide
Query:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMA-RSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPG
        M R SN ++G LN    + SIPI+ GG+W++ + ST CE FL  P++ +G  ++VV++AG IG+C  V W LWVYL VM +LI  +  +T+F FVVT  G
Subjt:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMA-RSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPG

Query:  GGVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASW---TPLD-YLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQ------D
         G EA  G+ Y+EY L  YS WL+KRV++ + W  IRSC++ SK C+KL +     P++ + +  +T +QSGCCKP   C ++ +              +
Subjt:  GGVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASW---TPLD-YLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQ------D

Query:  PDCYRWNNAPNLLCYECDSCKAGVLEDIRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAET
        PDC  W+NA   LC++C SCKAG+L++++  W K++++N+V +V LI VYSVGCCAFRN KR ++
Subjt:  PDCYRWNNAPNLLCYECDSCKAGVLEDIRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAET

AT3G12090.1 tetraspanin62.1e-12070.73Show/hide
Query:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGG
        MYRFSNTVIG LNL TL+ASIPIIG  L+ ARSSTTCE+FLQTPLLV+GF++L+VSLAGFIGACFNVAWALWVYLVVM+ LIATLMGLT+FG VVT  GG
Subjt:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGG

Query:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN
        GVE P GR+Y+EY L  Y  WLR+RV+DP YW +IRSC+L SKTC K+ SWT LDY +RDMT +QSGCCKPPTAC Y+      VV    DC+RWNN   
Subjt:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN

Query:  LLCYECDSCKAGVLEDIRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAETDY-PYGHNRMTKVRPRWDYYWWRWLHDKREQLY
        +LCYECD+CKAGVLE+IR DW KLSV+N++V+VLLI VY+ GCCAF NT+ A   Y P   NRMT+VRPRWDYYWWRW H+K+EQLY
Subjt:  LLCYECDSCKAGVLEDIRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAETDY-PYGHNRMTKVRPRWDYYWWRWLHDKREQLY

AT3G45600.1 tetraspanin31.5e-6543.93Show/hide
Query:  RFSNTVIGFLNLFTLIASIPIIGGGLWMA--RSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGG
        R SN +IG +N  T + SIPI+GGG+W++   +ST C  FLQ PL+V+G  ++VVSLAGF GAC+   + +W+YLVVML++IA L+G  IF + VT  G 
Subjt:  RFSNTVIGFLNLFTLIASIPIIGGGLWMA--RSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGG

Query:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKL------ASWTPLDYLERDMTPIQSGCCKPPTACNYDMM------AAGAVVAQ
        G      R Y +Y+LE YSGWL+ RV D  YW  I SC+  S  C K+         T   +  R ++P++SGCCKPPT C +  +        G ++  
Subjt:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKL------ASWTPLDYLERDMTPIQSGCCKPPTACNYDMM------AAGAVVAQ

Query:  DPDCYRWNNAPNLLCYECDSCKAGVLEDIRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAETDYPYGHNRMTKVRP
        + DC  W+N  ++LCY+C SCKAGVL  +++ W K+SV+N+VV+++L+  Y +   A+RN KR + D P G  RMTK  P
Subjt:  DPDCYRWNNAPNLLCYECDSCKAGVLEDIRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAETDYPYGHNRMTKVRP

AT4G23410.1 tetraspanin51.5e-10260.28Show/hide
Query:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGG
        M R SNTVIGFLN+ TLI+SI ++G  LWM RS TTCE FLQ PLL++G  +L++S+AG +GAC +VAW LWVYL  M+ +I  LMGLT+FGF+VT   G
Subjt:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGG

Query:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN
        GV    GRVY+E+ LE Y  WL+ RV D  YWVTI++C+LGS TC+KLA WTPLDYL++D++P+QSGCCKPPT+C Y+      V+ QDPDCYRWNNA  
Subjt:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN

Query:  LLCYECDSCKAGVLEDIRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAE-TDYPYGHNRMTKVRPRWDYYWWRWLHDK
        +LCY+CD+C+AGVLE +RRDWHKLS++NV+VV+ LI VY VGCCAF+N KR +   +PYG   M+K RP W+  W RW H +
Subjt:  LLCYECDSCKAGVLEDIRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAE-TDYPYGHNRMTKVRPRWDYYWWRWLHDK

AT5G60220.1 tetraspanin42.6e-6543.88Show/hide
Query:  RFSNTVIGFLNLFTLIASIPIIGGGLWMA--RSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGG
        R  + +IG +N FT + SIPI+GGG+W++   +ST C  FLQ PL+++G  ++V+SLAG  GAC+   + +W+YL  M  +IA L+G TIF +VVT  G 
Subjt:  RFSNTVIGFLNLFTLIASIPIIGGGLWMA--RSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGG

Query:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKL------ASWTPLDYLERDMTPIQSGCCKPPTACNYD------MMAAGAVVAQ
        G      R Y +Y+L  YSGWL+ RV D  YW  I SCV  S  C K+         T   +  R+++P++SGCCKPPT C Y        +  G +V  
Subjt:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKL------ASWTPLDYLERDMTPIQSGCCKPPTACNYD------MMAAGAVVAQ

Query:  DPDCYRWNNAPNLLCYECDSCKAGVLEDIRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAETDYPYGHNRMTKV
        +PDC  WNN   LLCY+C SCKAGVL  +++ W K+SV+N+VVV++L+  Y + C A++N KR   D P G  RMT +
Subjt:  DPDCYRWNNAPNLLCYECDSCKAGVLEDIRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAETDYPYGHNRMTKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATCGATTCAGCAACACGGTGATCGGGTTCTTGAACCTGTTCACGCTCATAGCCTCGATCCCGATCATCGGCGGCGGGCTGTGGATGGCGAGAAGCAGCACGACGTG
CGAGAGCTTCTTGCAGACGCCGCTGCTGGTGGTGGGGTTCGTGGTACTGGTGGTGTCTTTGGCGGGGTTCATTGGTGCTTGTTTTAACGTTGCGTGGGCGCTATGGGTTT
ACTTGGTGGTTATGTTGGTTCTAATTGCGACGCTTATGGGCCTGACGATTTTTGGGTTTGTGGTTACTGGGCCTGGCGGTGGAGTGGAGGCGCCTGGTGGGAGGGTGTAT
AGAGAGTACCATTTGGAGCAATATTCGGGTTGGTTGAGGAAGAGGGTTAAGGATCCGAGGTATTGGGTTACTATTAGGAGCTGTGTTTTGGGGTCTAAAACTTGTGCTAA
GCTTGCTTCTTGGACTCCTCTTGATTATCTTGAAAGAGATATGACCCCGATTCAGTCAGGTTGTTGCAAGCCGCCAACGGCGTGCAACTACGACATGATGGCGGCGGGGG
CGGTGGTGGCTCAGGATCCCGATTGCTACCGGTGGAACAATGCCCCTAACTTGCTGTGCTACGAGTGCGACTCTTGTAAGGCGGGTGTCCTTGAGGACATTCGAAGGGAC
TGGCACAAGCTCTCCGTCCTCAACGTCGTCGTTGTCGTCCTCCTCATCGGCGTTTACTCTGTCGGCTGCTGTGCCTTCCGTAACACCAAGAGGGCCGAGACCGACTACCC
TTATGGTCACAACCGGATGACCAAAGTTCGACCAAGATGGGACTACTATTGGTGGAGATGGTTGCATGACAAGAGAGAACAACTTTATTAA
mRNA sequenceShow/hide mRNA sequence
AAAGATAAACACATTAGTGCATAAAAAAAAAAATTAAAAAATATCCAAATTTTTTTAATTTAAAGCATTGAAAAAGGGTTTCCTTAATGTGTAAGAAGCAGAGTTCGAGT
CTTTATCACATGCTGATTCAGACCAACGCCACTTTAAAAACACACACGACCAACCAAATTGCACAAAAGGGAACCCCAAAAGCTCCGGTATGTATCGATTCAGCAACACG
GTGATCGGGTTCTTGAACCTGTTCACGCTCATAGCCTCGATCCCGATCATCGGCGGCGGGCTGTGGATGGCGAGAAGCAGCACGACGTGCGAGAGCTTCTTGCAGACGCC
GCTGCTGGTGGTGGGGTTCGTGGTACTGGTGGTGTCTTTGGCGGGGTTCATTGGTGCTTGTTTTAACGTTGCGTGGGCGCTATGGGTTTACTTGGTGGTTATGTTGGTTC
TAATTGCGACGCTTATGGGCCTGACGATTTTTGGGTTTGTGGTTACTGGGCCTGGCGGTGGAGTGGAGGCGCCTGGTGGGAGGGTGTATAGAGAGTACCATTTGGAGCAA
TATTCGGGTTGGTTGAGGAAGAGGGTTAAGGATCCGAGGTATTGGGTTACTATTAGGAGCTGTGTTTTGGGGTCTAAAACTTGTGCTAAGCTTGCTTCTTGGACTCCTCT
TGATTATCTTGAAAGAGATATGACCCCGATTCAGTCAGGTTGTTGCAAGCCGCCAACGGCGTGCAACTACGACATGATGGCGGCGGGGGCGGTGGTGGCTCAGGATCCCG
ATTGCTACCGGTGGAACAATGCCCCTAACTTGCTGTGCTACGAGTGCGACTCTTGTAAGGCGGGTGTCCTTGAGGACATTCGAAGGGACTGGCACAAGCTCTCCGTCCTC
AACGTCGTCGTTGTCGTCCTCCTCATCGGCGTTTACTCTGTCGGCTGCTGTGCCTTCCGTAACACCAAGAGGGCCGAGACCGACTACCCTTATGGTCACAACCGGATGAC
CAAAGTTCGACCAAGATGGGACTACTATTGGTGGAGATGGTTGCATGACAAGAGAGAACAACTTTATTAAGATAGAAGAAATATTCCCCATTTCTTCACTTTTTACTTAC
TTTTTTTATTTGTATAAACTTTTTTTTTTTTTGGCTAGTTTTTCATTTCCCTATATAAAGAACGACTTTTACCTTTTTACCTCAAATATTTGTTGGTTCGTTTAGGTCGG
CTCGACTTTACTGATTTTCTCTTTTGAGTAGCCTAGTTCAATAATAATCAACGTATATTAGTCT
Protein sequenceShow/hide protein sequence
MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGGGVEAPGGRVY
REYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPNLLCYECDSCKAGVLEDIRRD
WHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY