; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G014390 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G014390
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionglycine-rich cell wall structural protein 1.0-like
Genome locationCmo_Chr04:7364763..7365245
RNA-Seq ExpressionCmoCh04G014390
SyntenyCmoCh04G014390
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601160.1 hypothetical protein SDJN03_06393, partial [Cucurbita argyrosperma subsp. sororia]1.6e-5892.67Show/hide
Query:  MPAFCPPLSPFESAPPFSFNALFVPGAGGGDELTSGEGAGGEMLVSGGGGGLSVVFDGGGGGLPVVLDGGGGGGLPVVLDGAGGGGLPVVLDGAGGGGLP
        MPAFCPPLSPFESAPPFSFNALFVPGAGGGDELTSGEGAGGEMLVSGGGGGLSVVFDGGGGGLPVVLDGGGGGGLPVVLDGAGGGGLPVVLDGAGGGGLP
Subjt:  MPAFCPPLSPFESAPPFSFNALFVPGAGGGDELTSGEGAGGEMLVSGGGGGLSVVFDGGGGGLPVVLDGGGGGGLPVVLDGAGGGGLPVVLDGAGGGGLP

Query:  VVLDGTGGGGLPVVLDGGG---------GGGGGAPSVVFNGGGGGGGDAS
        VVLDG GGGGLPVVLDG G         GGGGGAPSVVFNGGGGGGGDAS
Subjt:  VVLDGTGGGGLPVVLDGGG---------GGGGGAPSVVFNGGGGGGGDAS

XP_022957272.1 loricrin-like [Cucurbita moschata]2.5e-6492.5Show/hide
Query:  MQMNPKNPNKPAPIITPNAMPAFCPPLSPFESAPPFSFNALFVPGAGGGDELTSGEGAGGEMLVSGGGGGLSVVFDGGGGGLPVVLDGGGGGGLPVVLDG
        MQMNPKNPNKPAPIITPNAMPAFCPPLSPFESAPPFSFNALFVPGAGGGDELTSGEGAGGEMLVSGGGGGLSVVFDGGGGGLPVVLDGGGGGGLPVVLDG
Subjt:  MQMNPKNPNKPAPIITPNAMPAFCPPLSPFESAPPFSFNALFVPGAGGGDELTSGEGAGGEMLVSGGGGGLSVVFDGGGGGLPVVLDGGGGGGLPVVLDG

Query:  AGGGGLPVVLDGAGGGGLPVVLDGTGGGGLPVVLDGGGGGGGGAPSVVFNGGGGGGGDAS
        AGGGGLPVVLDGA            GGGGLPVVLDGGGGGGGGAPSVVFNGGGGGGGDAS
Subjt:  AGGGGLPVVLDGAGGGGLPVVLDGTGGGGLPVVLDGGGGGGGGAPSVVFNGGGGGGGDAS

XP_022990509.1 glycine-rich cell wall structural protein 1.0-like [Cucurbita maxima]7.2e-5181.65Show/hide
Query:  MNPKNPNKPAPIITPNAMPAFCPPLSPFESAPPFSFNALFVPGAGGGDELTSGEGAGGEMLVSGGGGGLSVVFDGGGGGLPVVLDGGGGGGLPVVLDGAG
        MNPKNPNKPAPIITP  MPAFCPPLSPFESAPPFSFNA FV GAGGGDE TSGEGA       GGGGG+SVVFDG          GGGGGGLP VLDG G
Subjt:  MNPKNPNKPAPIITPNAMPAFCPPLSPFESAPPFSFNALFVPGAGGGDELTSGEGAGGEMLVSGGGGGLSVVFDGGGGGLPVVLDGGGGGGLPVVLDGAG

Query:  GGGLPVVLDGAGGGGLPVVLDGTGGGGLPVVLDGGGGGGGGAPSVVFNGGGGGGGDAS
        GGGLPVVLDG GGGGLPVVLDG GGGGLPVVLD  GGGGGGAPSVVFNGGGGGGGDAS
Subjt:  GGGLPVVLDGAGGGGLPVVLDGTGGGGLPVVLDGGGGGGGGAPSVVFNGGGGGGGDAS

XP_023549817.1 glycine-rich cell wall structural protein-like [Cucurbita pepo subsp. pepo]2.7e-5886.25Show/hide
Query:  MQMNPKNPNKPAPIITPNAMPAFCPPLSPFESAPPFSFNALFVPGAGGGDELTSGEGAGGEMLVSGGGGGLSVVFDGGGGGLPVVLDGGGGGGLPVVLDG
        MQMNPKNPNKPAP+ITPNAMPAFCPPLSPFESAPPFSFNALFV GAG GDELTSGEGAGGEMLVSGGGGGLSVVFDGGGGG  VV +GGGGGGLPVVLD 
Subjt:  MQMNPKNPNKPAPIITPNAMPAFCPPLSPFESAPPFSFNALFVPGAGGGDELTSGEGAGGEMLVSGGGGGLSVVFDGGGGGLPVVLDGGGGGGLPVVLDG

Query:  AGGGGLPVVLDGAGGGGLPVVLDGTGGGGLPVVLDGGGGGGGGAPSVVFNGGGGGGGDAS
        AGGGGLPVVLDGAGGGGLPVVLD              GGGGGGAPSVVFNGGGGGGGDAS
Subjt:  AGGGGLPVVLDGAGGGGLPVVLDGTGGGGLPVVLDGGGGGGGGAPSVVFNGGGGGGGDAS

XP_031741791.1 glycine-rich protein 23-like [Cucumis sativus]3.2e-3560.22Show/hide
Query:  MQMNPKNPNKPAPIITPNAMPAFCPPLSPFESAPPFSFNALFVPGAGGGDELTSGEGA-----------GGEMLVSGGGGGLSVVFDG-GGGGLPVVLDG
        MQ+NP NPNKP P+ITPNA+PAFCPPL+PFE  PPFSFNA    G GGGDE   G GA           GGE++V  GGGG+SV  DG GGGG  VVL G
Subjt:  MQMNPKNPNKPAPIITPNAMPAFCPPLSPFESAPPFSFNALFVPGAGGGDELTSGEGA-----------GGEMLVSGGGGGLSVVFDG-GGGGLPVVLDG

Query:  GGGGGLPVVLDGAGGGGLPVVLDGAGGGGLPVVLDGTGGGGLPVVLDGGG---------GGGGGAPSVVFNGGGGGGGDAS
        GGGGG  V LDG GGGG  V LDG GGGG  V LDG GGGG  V LDGGG         GGGGG  SV  +GGGGGG   +
Subjt:  GGGGGLPVVLDGAGGGGLPVVLDGAGGGGLPVVLDGTGGGGLPVVLDGGG---------GGGGGAPSVVFNGGGGGGGDAS

TrEMBL top hitse value%identityAlignment
A0A1S4DW63 loricrin-like1.1e-2063.71Show/hide
Query:  FVPGAGGGDELTSGEGAGG-EMLVSGGGGGLSVVFD-GGGGGLPVVLDGGGGGGLPVVLDGAGGGGLPVVLDGAGGGGLPVVLDGTGGGGLPVVLDGGGG
        F  G GGGDEL   +G GG  +++ GGGGG+SVVFD GGGGG+ VV DGGGGGG+ VV DG GGGG+ VV DG GGGG+ VVLDG GGGG+ VV DGGGG
Subjt:  FVPGAGGGDELTSGEGAGG-EMLVSGGGGGLSVVFD-GGGGGLPVVLDGGGGGGLPVVLDGAGGGGLPVVLDGAGGGGLPVVLDGTGGGGLPVVLDGGGG

Query:  -------GGGGAPSVVFNGGGGGG
               GGGG  SV+ +GGGGGG
Subjt:  -------GGGGAPSVVFNGGGGGG

A0A6J1GYP3 loricrin-like1.2e-6492.5Show/hide
Query:  MQMNPKNPNKPAPIITPNAMPAFCPPLSPFESAPPFSFNALFVPGAGGGDELTSGEGAGGEMLVSGGGGGLSVVFDGGGGGLPVVLDGGGGGGLPVVLDG
        MQMNPKNPNKPAPIITPNAMPAFCPPLSPFESAPPFSFNALFVPGAGGGDELTSGEGAGGEMLVSGGGGGLSVVFDGGGGGLPVVLDGGGGGGLPVVLDG
Subjt:  MQMNPKNPNKPAPIITPNAMPAFCPPLSPFESAPPFSFNALFVPGAGGGDELTSGEGAGGEMLVSGGGGGLSVVFDGGGGGLPVVLDGGGGGGLPVVLDG

Query:  AGGGGLPVVLDGAGGGGLPVVLDGTGGGGLPVVLDGGGGGGGGAPSVVFNGGGGGGGDAS
        AGGGGLPVVLDGA            GGGGLPVVLDGGGGGGGGAPSVVFNGGGGGGGDAS
Subjt:  AGGGGLPVVLDGAGGGGLPVVLDGTGGGGLPVVLDGGGGGGGGAPSVVFNGGGGGGGDAS

A0A6J1JS83 glycine-rich cell wall structural protein 1.0-like3.5e-5181.65Show/hide
Query:  MNPKNPNKPAPIITPNAMPAFCPPLSPFESAPPFSFNALFVPGAGGGDELTSGEGAGGEMLVSGGGGGLSVVFDGGGGGLPVVLDGGGGGGLPVVLDGAG
        MNPKNPNKPAPIITP  MPAFCPPLSPFESAPPFSFNA FV GAGGGDE TSGEGA       GGGGG+SVVFDG          GGGGGGLP VLDG G
Subjt:  MNPKNPNKPAPIITPNAMPAFCPPLSPFESAPPFSFNALFVPGAGGGDELTSGEGAGGEMLVSGGGGGLSVVFDGGGGGLPVVLDGGGGGGLPVVLDGAG

Query:  GGGLPVVLDGAGGGGLPVVLDGTGGGGLPVVLDGGGGGGGGAPSVVFNGGGGGGGDAS
        GGGLPVVLDG GGGGLPVVLDG GGGGLPVVLD  GGGGGGAPSVVFNGGGGGGGDAS
Subjt:  GGGLPVVLDGAGGGGLPVVLDGTGGGGLPVVLDGGGGGGGGAPSVVFNGGGGGGGDAS

A0A7I8IHU7 Hypothetical protein1.8e-0747.14Show/hide
Query:  GAGGGDELTSGEGAGGEMLVSGGGGGLSVVFDG--------GGGGLPVVLDGGGGGGLPVVL-------DGAGGGGLPVVL-------DGAGGGGLPVVL
        G GGG  +  G G GG     GGGGG  +   G        GGGG P+ L GGGGGG P+ L        G GGGG P+ L        G GGGG P+ L
Subjt:  GAGGGDELTSGEGAGGEMLVSGGGGGLSVVFDG--------GGGGLPVVLDGGGGGGLPVVL-------DGAGGGGLPVVL-------DGAGGGGLPVVL

Query:  DGTGGGGLPVVLDGGGG-----GGGGAPSVVFNGGGGGGG
         G GGGG P+ L GGGG     GGGGAP  +  GGGGGGG
Subjt:  DGTGGGGLPVVLDGGGG-----GGGGAPSVVFNGGGGGGG

A0A7I8K922 Hypothetical protein1.1e-0752.54Show/hide
Query:  GAGGGDELTSGEGAGGEMLVSGGGGGLSVVFDGGGGGLPVVLDGGGGGGLPVVLDGAGGGGLPVVLDGAGGGGLPVVLDGTGGGGLPVVLDGGGG-----
        G GGG  +  G G GG     GGGGG  +   GGGGG      GGGGGG P+ L G GGGG      G GGGG P+ L G GGGG P+ L GGGG     
Subjt:  GAGGGDELTSGEGAGGEMLVSGGGGGLSVVFDGGGGGLPVVLDGGGGGGLPVVLDGAGGGGLPVVLDGAGGGGLPVVLDGTGGGGLPVVLDGGGG-----

Query:  GGGGAPSVVFNGGGGGGG
        GGGGAP  +  GGGGGGG
Subjt:  GGGGAPSVVFNGGGGGGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAATGAATCCTAAGAATCCCAACAAGCCTGCTCCTATAATCACTCCAAACGCAATGCCTGCCTTTTGTCCGCCACTCAGTCCTTTTGAATCTGCACCACCCTTTTC
ATTCAATGCTTTGTTCGTGCCCGGCGCCGGCGGCGGAGATGAGCTTACGTCAGGCGAAGGTGCGGGTGGTGAGATGTTGGTGTCGGGTGGCGGTGGTGGACTCTCAGTGG
TATTTGATGGTGGCGGAGGCGGACTGCCAGTTGTGTTGGATGGCGGCGGCGGAGGTGGACTGCCAGTTGTGTTGGATGGCGCTGGCGGAGGTGGACTGCCAGTTGTGTTG
GATGGCGCTGGCGGAGGTGGGCTGCCAGTTGTGTTGGATGGCACTGGCGGAGGTGGACTGCCAGTTGTGTTGGATGGCGGCGGCGGCGGCGGCGGCGGTGCACCATCGGT
TGTATTCAACGGCGGCGGTGGAGGAGGAGGAGATGCATCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAAATGAATCCTAAGAATCCCAACAAGCCTGCTCCTATAATCACTCCAAACGCAATGCCTGCCTTTTGTCCGCCACTCAGTCCTTTTGAATCTGCACCACCCTTTTC
ATTCAATGCTTTGTTCGTGCCCGGCGCCGGCGGCGGAGATGAGCTTACGTCAGGCGAAGGTGCGGGTGGTGAGATGTTGGTGTCGGGTGGCGGTGGTGGACTCTCAGTGG
TATTTGATGGTGGCGGAGGCGGACTGCCAGTTGTGTTGGATGGCGGCGGCGGAGGTGGACTGCCAGTTGTGTTGGATGGCGCTGGCGGAGGTGGACTGCCAGTTGTGTTG
GATGGCGCTGGCGGAGGTGGGCTGCCAGTTGTGTTGGATGGCACTGGCGGAGGTGGACTGCCAGTTGTGTTGGATGGCGGCGGCGGCGGCGGCGGCGGTGCACCATCGGT
TGTATTCAACGGCGGCGGTGGAGGAGGAGGAGATGCATCTTGA
Protein sequenceShow/hide protein sequence
MQMNPKNPNKPAPIITPNAMPAFCPPLSPFESAPPFSFNALFVPGAGGGDELTSGEGAGGEMLVSGGGGGLSVVFDGGGGGLPVVLDGGGGGGLPVVLDGAGGGGLPVVL
DGAGGGGLPVVLDGTGGGGLPVVLDGGGGGGGGAPSVVFNGGGGGGGDAS