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CmoCh04G014460 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G014460
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCytochrome c oxidase assembly protein cox16
Genome locationCmo_Chr04:7411518..7412723
RNA-Seq ExpressionCmoCh04G014460
SyntenyCmoCh04G014460
Gene Ontology termsGO:0005743 - mitochondrial inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR020164 - Cytochrome c oxidase assembly protein COX16


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7031970.1 hypothetical protein SDJN02_06012, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-6292.2Show/hide
Query:  MTSTEAGMGQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNI
        MTSTEAGMGQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNI
Subjt:  MTSTEAGMGQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNI

Query:  SLEEELR----------ALQEKVDINNYEYKRIPKPTDRTS
        SLEEEL           ALQEKVDINNYEYKRIPKPTDRTS
Subjt:  SLEEELR----------ALQEKVDINNYEYKRIPKPTDRTS

XP_022956367.1 uncharacterized protein LOC111458129 [Cucurbita moschata]1.1e-65100Show/hide
Query:  MTSTEAGMGQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNI
        MTSTEAGMGQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNI
Subjt:  MTSTEAGMGQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNI

Query:  SLEEELRALQEKVDINNYEYKRIPKPTDRTS
        SLEEELRALQEKVDINNYEYKRIPKPTDRTS
Subjt:  SLEEELRALQEKVDINNYEYKRIPKPTDRTS

XP_022969704.1 uncharacterized protein LOC111468648 [Cucurbita maxima]3.2e-6599.24Show/hide
Query:  MTSTEAGMGQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNI
        MTSTEAG+GQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNI
Subjt:  MTSTEAGMGQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNI

Query:  SLEEELRALQEKVDINNYEYKRIPKPTDRTS
        SLEEELRALQEKVDINNYEYKRIPKPTDRTS
Subjt:  SLEEELRALQEKVDINNYEYKRIPKPTDRTS

XP_023533207.1 uncharacterized protein LOC111795161 [Cucurbita pepo subsp. pepo]2.5e-6599.24Show/hide
Query:  MTSTEAGMGQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNI
        MTSTEAGMGQSTEQKKSVSANNAARSSPSMF+RWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNI
Subjt:  MTSTEAGMGQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNI

Query:  SLEEELRALQEKVDINNYEYKRIPKPTDRTS
        SLEEELRALQEKVDINNYEYKRIPKPTDRTS
Subjt:  SLEEELRALQEKVDINNYEYKRIPKPTDRTS

XP_038891357.1 uncharacterized protein LOC120080793 isoform X2 [Benincasa hispida]2.8e-6193.13Show/hide
Query:  MTSTEAGMGQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNI
        MTSTEAG+GQSTE KK  S NNA R+SPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKV+DDQEWEITEMRKALSRTGPIDAYKPKNI
Subjt:  MTSTEAGMGQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNI

Query:  SLEEELRALQEKVDINNYEYKRIPKPTDRTS
        SLEEELRALQEKVDINNYEYKRIPKPTD+TS
Subjt:  SLEEELRALQEKVDINNYEYKRIPKPTDRTS

TrEMBL top hitse value%identityAlignment
A0A1S4DWC3 uncharacterized protein LOC103489460 isoform X12.3e-6193.13Show/hide
Query:  MTSTEAGMGQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNI
        MTSTEAGMG+STE KK  SA+NAAR+SPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMR+ALSRTGPIDAYKPKNI
Subjt:  MTSTEAGMGQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNI

Query:  SLEEELRALQEKVDINNYEYKRIPKPTDRTS
        SLEEELRALQE+VDINNYEYKRIP+PTDRTS
Subjt:  SLEEELRALQEKVDINNYEYKRIPKPTDRTS

A0A5A7SXX4 Cytochrome c oxidase assembly protein cox161.3e-5182.81Show/hide
Query:  TEAGMGQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNISLE
        TEAGMG+STE KK  SA+NAAR+SPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMR+ALSRTGPIDA+   ++ + 
Subjt:  TEAGMGQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNISLE

Query:  EELRALQEKVDINNYEYKRIPKPTDRTS
        ++ +ALQE+VDINNYEYKRIP+PTDRTS
Subjt:  EELRALQEKVDINNYEYKRIPKPTDRTS

A0A6J1CBH5 uncharacterized protein LOC1110100642.2e-5687.79Show/hide
Query:  MTSTEAGMGQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNI
        MTS E GM QS E  K  SA N AR+SPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGP+DAYKPKNI
Subjt:  MTSTEAGMGQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNI

Query:  SLEEELRALQEKVDINNYEYKRIPKPTDRTS
        SLEEELRALQEKV+IN+YEYKRIPKP+ RTS
Subjt:  SLEEELRALQEKVDINNYEYKRIPKPTDRTS

A0A6J1GWL5 uncharacterized protein LOC1114581295.3e-66100Show/hide
Query:  MTSTEAGMGQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNI
        MTSTEAGMGQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNI
Subjt:  MTSTEAGMGQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNI

Query:  SLEEELRALQEKVDINNYEYKRIPKPTDRTS
        SLEEELRALQEKVDINNYEYKRIPKPTDRTS
Subjt:  SLEEELRALQEKVDINNYEYKRIPKPTDRTS

A0A6J1HX89 uncharacterized protein LOC1114686481.6e-6599.24Show/hide
Query:  MTSTEAGMGQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNI
        MTSTEAG+GQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNI
Subjt:  MTSTEAGMGQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNI

Query:  SLEEELRALQEKVDINNYEYKRIPKPTDRTS
        SLEEELRALQEKVDINNYEYKRIPKPTDRTS
Subjt:  SLEEELRALQEKVDINNYEYKRIPKPTDRTS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G14145.1 unknown protein2.0e-4465.41Show/hide
Query:  MTSTEAGM--GQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPK
        MT+ E G    +S+      +     + S + F+RWGRRHPF+RYGLPMISLTV GA+GLG LLQGSKDIAKVKDDQEWEI E RKALSRTGP+DAYKPK
Subjt:  MTSTEAGM--GQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPK

Query:  NISLEEELRALQEKVDINNYEYKRIPKPTDRTS
        N S+E+EL+A+QEKVDIN YEYK+IPK  +  S
Subjt:  NISLEEELRALQEKVDINNYEYKRIPKPTDRTS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCAGCACTGAGGCAGGAATGGGTCAGTCTACAGAACAAAAGAAGAGTGTTTCTGCCAACAATGCAGCTCGGTCGTCTCCATCCATGTTTAGAAGATGGGGTAGAAG
ACACCCATTTATCAGATATGGACTTCCAATGATCTCTCTCACTGTGCTTGGGGCAGTTGGTCTTGGCCATCTCTTGCAAGGAAGTAAAGATATTGCAAAGGTGAAAGATG
ATCAAGAATGGGAGATCACTGAGATGAGAAAAGCCCTGTCAAGAACGGGACCTATTGACGCGTATAAGCCGAAAAATATATCGTTAGAAGAAGAACTGAGGGCTTTACAA
GAGAAGGTAGACATCAACAACTATGAATACAAGAGAATTCCAAAGCCCACTGATCGAACATCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGACCAGCACTGAGGCAGGAATGGGTCAGTCTACAGAACAAAAGAAGAGTGTTTCTGCCAACAATGCAGCTCGGTCGTCTCCATCCATGTTTAGAAGATGGGGTAGAAG
ACACCCATTTATCAGATATGGACTTCCAATGATCTCTCTCACTGTGCTTGGGGCAGTTGGTCTTGGCCATCTCTTGCAAGGAAGTAAAGATATTGCAAAGGTGAAAGATG
ATCAAGAATGGGAGATCACTGAGATGAGAAAAGCCCTGTCAAGAACGGGACCTATTGACGCGTATAAGCCGAAAAATATATCGTTAGAAGAAGAACTGAGGGCTTTACAA
GAGAAGGTAGACATCAACAACTATGAATACAAGAGAATTCCAAAGCCCACTGATCGAACATCCTGAAATTTAGCCCTCCAAAAGTTGCATACAACACCAGTTCAGGTATT
TTGTATCCTCACTTGTAATTCCTTTTGAAGATTATGACAATAAACATCCTTTTCGAATGAGCAAAATGTTCCCTTTTTTGAGTTTTGTTTCAACCTTTTGGAATTTTTTA
TGCTCATCTTTTCTCTACATATTGCTGTGACCTCTTTGTTTCAACCTTTTTATGCTTATTTATTTAATTGTTTTTTTGTAAAAAAAATTATTGTTTTTAATTTTAGAAAC
GATAATAAAATTGTGACTTTGGGGCGTCTACC
Protein sequenceShow/hide protein sequence
MTSTEAGMGQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNISLEEELRALQ
EKVDINNYEYKRIPKPTDRTS