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CmoCh04G015070 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G015070
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptioniron-sulfur assembly protein IscA-like 1, mitochondrial
Genome locationCmo_Chr04:7715835..7720698
RNA-Seq ExpressionCmoCh04G015070
SyntenyCmoCh04G015070
Gene Ontology termsGO:0006260 - DNA replication (biological process)
GO:0006281 - DNA repair (biological process)
GO:0006310 - DNA recombination (biological process)
GO:0016226 - iron-sulfur cluster assembly (biological process)
GO:0097428 - protein maturation by iron-sulfur cluster transfer (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005739 - mitochondrion (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0051537 - 2 iron, 2 sulfur cluster binding (molecular function)
InterPro domainsIPR000361 - FeS cluster biogenesis
IPR012340 - Nucleic acid-binding, OB-fold
IPR013970 - Replication factor A protein 3
IPR016092 - FeS cluster insertion protein
IPR035903 - HesB-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7032017.1 Iron-sulfur assembly protein IscA-like 1, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]7.6e-4691.96Show/hide
Query:  ICSYAMRRASSSSFLAAASQKVGPAARRKILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLNYADEKGKFDELVEDQNVKILIEPKALMHVI
        I S+    ASSSSF AAASQKVGPAARR+ILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLNYADEKGKFDELVEDQNVKILIEPKALMHVI
Subjt:  ICSYAMRRASSSSFLAAASQKVGPAARRKILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLNYADEKGKFDELVEDQNVKILIEPKALMHVI

Query:  GTKMDFVDDKLR
        GTKMDF+DDKLR
Subjt:  GTKMDFVDDKLR

XP_022956980.1 iron-sulfur assembly protein IscA-like 1, mitochondrial [Cucurbita moschata]6.8e-47100Show/hide
Query:  ASSSSFLAAASQKVGPAARRKILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLNYADEKGKFDELVEDQNVKILIEPKALMHVIGTKMDFVD
        ASSSSFLAAASQKVGPAARRKILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLNYADEKGKFDELVEDQNVKILIEPKALMHVIGTKMDFVD
Subjt:  ASSSSFLAAASQKVGPAARRKILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLNYADEKGKFDELVEDQNVKILIEPKALMHVIGTKMDFVD

Query:  DKLR
        DKLR
Subjt:  DKLR

XP_022987453.1 iron-sulfur assembly protein IscA-like 1, mitochondrial [Cucurbita maxima]5.8e-4692.86Show/hide
Query:  ICSYAMRRASSSSFLAAASQKVGPAARRKILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLNYADEKGKFDELVEDQNVKILIEPKALMHVI
        I S+    ASSSSF AAASQKVGPAARR+ILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLNYADEKGKFDELVEDQNVKILIEPKALMHVI
Subjt:  ICSYAMRRASSSSFLAAASQKVGPAARRKILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLNYADEKGKFDELVEDQNVKILIEPKALMHVI

Query:  GTKMDFVDDKLR
        GTKMDFVDDKLR
Subjt:  GTKMDFVDDKLR

XP_023539778.1 iron-sulfur assembly protein IscA-like 1, mitochondrial [Cucurbita pepo subsp. pepo]2.0e-4699.04Show/hide
Query:  ASSSSFLAAASQKVGPAARRKILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLNYADEKGKFDELVEDQNVKILIEPKALMHVIGTKMDFVD
        ASSSSFLAAASQKVGPAARR+ILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLNYADEKGKFDELVEDQNVKILIEPKALMHVIGTKMDFVD
Subjt:  ASSSSFLAAASQKVGPAARRKILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLNYADEKGKFDELVEDQNVKILIEPKALMHVIGTKMDFVD

Query:  DKLR
        DKLR
Subjt:  DKLR

XP_038891788.1 iron-sulfur assembly protein IscA-like 1, mitochondrial isoform X2 [Benincasa hispida]1.7e-5369.83Show/hide
Query:  ASSSSFLAAASQKVGPAARRKILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLNYADEKGKFDELVEDQNVKILIEPKALMHVIGTKMDFVD
        ASSSSF AAASQKVGPAARR+ILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLNYADEKGKFDELVEDQNVKILI+PKALMHVIGTKMDFVD
Subjt:  ASSSSFLAAASQKVGPAARRKILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLNYADEKGKFDELVEDQNVKILIEPKALMHVIGTKMDFVD

Query:  DKLRYLRNLLPTILCFQLNYHPYCLELFTTCKDPINFFLHRTIGVYLYQSKFERSMWLWGVLYDNRQCRSQQKMRQLEQ
        DKL                                                  RSMWLWGVLYDNRQCRSQQKMRQ EQ
Subjt:  DKLRYLRNLLPTILCFQLNYHPYCLELFTTCKDPINFFLHRTIGVYLYQSKFERSMWLWGVLYDNRQCRSQQKMRQLEQ

TrEMBL top hitse value%identityAlignment
A0A0A0KTF0 Fe-S_biosyn domain-containing protein8.2e-4697.12Show/hide
Query:  ASSSSFLAAASQKVGPAARRKILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLNYADEKGKFDELVEDQNVKILIEPKALMHVIGTKMDFVD
        ASSSSF AAASQK GPAARR+ILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLNYADEKGKFDELVEDQNVKILIEPKALMHVIGTKMDFVD
Subjt:  ASSSSFLAAASQKVGPAARRKILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLNYADEKGKFDELVEDQNVKILIEPKALMHVIGTKMDFVD

Query:  DKLR
        DKLR
Subjt:  DKLR

A0A1S3BFV2 iron-sulfur assembly protein IscA-like 1, mitochondrial5.3e-4595.19Show/hide
Query:  ASSSSFLAAASQKVGPAARRKILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLNYADEKGKFDELVEDQNVKILIEPKALMHVIGTKMDFVD
        ASSSSF AAASQK GPA RR+ILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLNYADEKGKFDELVEDQNVKILI+PKALMHVIGTKMDFVD
Subjt:  ASSSSFLAAASQKVGPAARRKILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLNYADEKGKFDELVEDQNVKILIEPKALMHVIGTKMDFVD

Query:  DKLR
        DKLR
Subjt:  DKLR

A0A5A7SVZ7 Iron-sulfur assembly protein IscA-like 15.3e-4595.19Show/hide
Query:  ASSSSFLAAASQKVGPAARRKILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLNYADEKGKFDELVEDQNVKILIEPKALMHVIGTKMDFVD
        ASSSSF AAASQK GPA RR+ILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLNYADEKGKFDELVEDQNVKILI+PKALMHVIGTKMDFVD
Subjt:  ASSSSFLAAASQKVGPAARRKILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLNYADEKGKFDELVEDQNVKILIEPKALMHVIGTKMDFVD

Query:  DKLR
        DKLR
Subjt:  DKLR

A0A6J1GZ87 iron-sulfur assembly protein IscA-like 1, mitochondrial3.3e-47100Show/hide
Query:  ASSSSFLAAASQKVGPAARRKILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLNYADEKGKFDELVEDQNVKILIEPKALMHVIGTKMDFVD
        ASSSSFLAAASQKVGPAARRKILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLNYADEKGKFDELVEDQNVKILIEPKALMHVIGTKMDFVD
Subjt:  ASSSSFLAAASQKVGPAARRKILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLNYADEKGKFDELVEDQNVKILIEPKALMHVIGTKMDFVD

Query:  DKLR
        DKLR
Subjt:  DKLR

A0A6J1JJH4 iron-sulfur assembly protein IscA-like 1, mitochondrial2.8e-4692.86Show/hide
Query:  ICSYAMRRASSSSFLAAASQKVGPAARRKILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLNYADEKGKFDELVEDQNVKILIEPKALMHVI
        I S+    ASSSSF AAASQKVGPAARR+ILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLNYADEKGKFDELVEDQNVKILIEPKALMHVI
Subjt:  ICSYAMRRASSSSFLAAASQKVGPAARRKILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLNYADEKGKFDELVEDQNVKILIEPKALMHVI

Query:  GTKMDFVDDKLR
        GTKMDFVDDKLR
Subjt:  GTKMDFVDDKLR

SwissProt top hitse value%identityAlignment
Q07821 Iron-sulfur assembly protein 18.5e-1647.06Show/hide
Query:  RRKILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLNYADEKGKFDELVEDQNVKILIEPKALMHVIGTKMDFVDDKL
        R+ ++TL+  A   +R LL Q +   +R+  + RGC+GL+Y L Y  E GKFDE+VE   VKI+I+ KAL  +IG++MD++DDKL
Subjt:  RRKILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLNYADEKGKFDELVEDQNVKILIEPKALMHVIGTKMDFVDDKL

Q8L8C0 Iron-sulfur assembly protein IscA-like 3, mitochondrial7.1e-3173.26Show/hide
Query:  RRKILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLNYADEKGKFDELVEDQNVKILIEPKALMHVIGTKMDFVDDKLR
        R+++L L++ AAARIRQLLQ +Q+PFLRL V+A+GCNGLSY LNYA EKGKFDE+VE++ VKIL++PKA+MHVIGT+MDFVDDKLR
Subjt:  RRKILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLNYADEKGKFDELVEDQNVKILIEPKALMHVIGTKMDFVDDKLR

Q8LBM4 Iron-sulfur assembly protein IscA-like 1, mitochondrial1.4e-3978.43Show/hide
Query:  SSSFLAAASQKVGPAARRKILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLNYADEKGKFDELVEDQNVKILIEPKALMHVIGTKMDFVDDK
        +S  LAAA+ +VGPA R+++LTLT+ AA+R+  LLQQRQ+PFLRLGVKARGCNGLSYTLNYADEKGKFDELVE++ V+IL+EPKALMHVIGTKMDFVDDK
Subjt:  SSSFLAAASQKVGPAARRKILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLNYADEKGKFDELVEDQNVKILIEPKALMHVIGTKMDFVDDK

Query:  LR
        LR
Subjt:  LR

Q8T3X9 Iron-sulfur cluster assembly 1 homolog, mitochondrial1.1e-1546.3Show/hide
Query:  AMRRASSSSFLAAASQKVGPAARRKILTLTEAAAARIRQLLQQR-QRPFLRLGVKARGCNGLSYTLNYADEKGKFDELVEDQNVKILIEPKALMHVIGTK
        A R  ++++  A   +K+ P   R  LTLT AA  RI+ LLQ +     L++GV+ RGCNGLSYTL+YA +K K DE V    VK+ I+ KA + ++GT+
Subjt:  AMRRASSSSFLAAASQKVGPAARRKILTLTEAAAARIRQLLQQR-QRPFLRLGVKARGCNGLSYTLNYADEKGKFDELVEDQNVKILIEPKALMHVIGTK

Query:  MDFVDDKL
        MDFV+ KL
Subjt:  MDFVDDKL

Q9ZD62 Uncharacterized protein RP4843.8e-1641.38Show/hide
Query:  RKILTLTEAAAARIRQLLQQRQRPF--LRLGVKARGCNGLSYTLNYADEKGKFDELVEDQNVKILIEPKALMHVIGTKMDFVDDKLR
        + +++LT+AAA +++ L+++R +P   +R+G+K+ GC G +Y + YAD K +FDE+VE++ V+ILI+PK LM+++G++MD+V+   +
Subjt:  RKILTLTEAAAARIRQLLQQRQRPF--LRLGVKARGCNGLSYTLNYADEKGKFDELVEDQNVKILIEPKALMHVIGTKMDFVDDKLR

Arabidopsis top hitse value%identityAlignment
AT2G16710.1 Iron-sulphur cluster biosynthesis family protein1.0e-4078.43Show/hide
Query:  SSSFLAAASQKVGPAARRKILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLNYADEKGKFDELVEDQNVKILIEPKALMHVIGTKMDFVDDK
        +S  LAAA+ +VGPA R+++LTLT+ AA+R+  LLQQRQ+PFLRLGVKARGCNGLSYTLNYADEKGKFDELVE++ V+IL+EPKALMHVIGTKMDFVDDK
Subjt:  SSSFLAAASQKVGPAARRKILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLNYADEKGKFDELVEDQNVKILIEPKALMHVIGTKMDFVDDK

Query:  LR
        LR
Subjt:  LR

AT2G16710.2 Iron-sulphur cluster biosynthesis family protein1.0e-4078.43Show/hide
Query:  SSSFLAAASQKVGPAARRKILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLNYADEKGKFDELVEDQNVKILIEPKALMHVIGTKMDFVDDK
        +S  LAAA+ +VGPA R+++LTLT+ AA+R+  LLQQRQ+PFLRLGVKARGCNGLSYTLNYADEKGKFDELVE++ V+IL+EPKALMHVIGTKMDFVDDK
Subjt:  SSSFLAAASQKVGPAARRKILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLNYADEKGKFDELVEDQNVKILIEPKALMHVIGTKMDFVDDK

Query:  LR
        LR
Subjt:  LR

AT2G16710.3 Iron-sulphur cluster biosynthesis family protein9.5e-3974.07Show/hide
Query:  SSSFLAAASQKVGPAARRKILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLNYA------DEKGKFDELVEDQNVKILIEPKALMHVIGTKM
        +S  LAAA+ +VGPA R+++LTLT+ AA+R+  LLQQRQ+PFLRLGVKARGCNGLSYTLNYA      DEKGKFDELVE++ V+IL+EPKALMHVIGTKM
Subjt:  SSSFLAAASQKVGPAARRKILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLNYA------DEKGKFDELVEDQNVKILIEPKALMHVIGTKM

Query:  DFVDDKLR
        DFVDDKLR
Subjt:  DFVDDKLR

AT2G36260.1 Iron-sulphur cluster biosynthesis family protein5.1e-3273.26Show/hide
Query:  RRKILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLNYADEKGKFDELVEDQNVKILIEPKALMHVIGTKMDFVDDKLR
        R+++L L++ AAARIRQLLQ +Q+PFLRL V+A+GCNGLSY LNYA EKGKFDE+VE++ VKIL++PKA+MHVIGT+MDFVDDKLR
Subjt:  RRKILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLNYADEKGKFDELVEDQNVKILIEPKALMHVIGTKMDFVDDKLR

AT4G18590.1 Nucleic acid-binding, OB-fold-like protein6.0e-1756.16Show/hide
Query:  MDTSNPAVFCNGELLNVHSGRKIRAVVQVIQSDGGVVTGKSTDEQHLTVHGLPTAPLMNFVEVVGIAEGNKII
        MDTS+PA F NG LL  + G+K+RAV+QVI+SD G V GKSTD+Q + V G P  PL  ++EV+GIAE +  I
Subjt:  MDTSNPAVFCNGELLNVHSGRKIRAVVQVIQSDGGVVTGKSTDEQHLTVHGLPTAPLMNFVEVVGIAEGNKII


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATACGTCAAACCCTGCAGTTTTTTGCAATGGTGAATTATTGAACGTGCATTCTGGAAGAAAGATTCGAGCAGTTGTTCAAGTTATTCAAAGTGATGGTGGAGTCGT
TACAGGGAAGTCTACGGATGAACAGCATTTGACTGTTCATGGCTTGCCCACAGCCCCTCTCATGAACTTTGTAGAGGTGGTTGGTATTGCTGAGGGCAACAAGATCATCA
ATGGACCGACTTTGGAACCACATTTGGTATGTACTAAAACCAAATGCCCAATCTTACAATCAGCTGTGCCAACTTGCAAATGGGGAATTCAGAAGTTTATTTCTGTAAGG
ATTTGTAGCTACGCAATGAGAAGAGCTTCTTCGTCTTCCTTTCTCGCCGCAGCTTCTCAGAAGGTCGGACCAGCCGCTCGCCGCAAAATTCTTACTCTGACGGAGGCCGC
CGCCGCTAGAATTCGACAACTTCTTCAACAGCGCCAACGTCCATTCCTCCGCCTTGGCGTCAAGGCGCGCGGTTGTAATGGTTTATCCTATACTCTCAACTACGCAGATG
AGAAAGGGAAGTTCGATGAACTGGTCGAGGATCAAAACGTGAAGATACTGATTGAACCGAAGGCGCTGATGCATGTAATAGGAACAAAGATGGACTTCGTAGATGACAAA
TTGAGGTATTTGAGAAATCTCTTACCTACAATTTTATGTTTTCAGCTCAATTATCATCCATATTGCTTGGAGCTATTTACAACATGCAAGGATCCCATTAATTTTTTTTT
GCACAGAACAATCGGAGTTTATCTTTATCAATCCAAATTCGAAAGGTCAATGTGGCTGTGGGGAGTCCTTTATGACAACAGGCAGTGCAGAAGCCAACAAAAAATGAGGC
AGTTGGAGCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATACGTCAAACCCTGCAGTTTTTTGCAATGGTGAATTATTGAACGTGCATTCTGGAAGAAAGATTCGAGCAGTTGTTCAAGTTATTCAAAGTGATGGTGGAGTCGT
TACAGGGAAGTCTACGGATGAACAGCATTTGACTGTTCATGGCTTGCCCACAGCCCCTCTCATGAACTTTGTAGAGGTGGTTGGTATTGCTGAGGGCAACAAGATCATCA
ATGGACCGACTTTGGAACCACATTTGGTATGTACTAAAACCAAATGCCCAATCTTACAATCAGCTGTGCCAACTTGCAAATGGGGAATTCAGAAGTTTATTTCTGTAAGG
ATTTGTAGCTACGCAATGAGAAGAGCTTCTTCGTCTTCCTTTCTCGCCGCAGCTTCTCAGAAGGTCGGACCAGCCGCTCGCCGCAAAATTCTTACTCTGACGGAGGCCGC
CGCCGCTAGAATTCGACAACTTCTTCAACAGCGCCAACGTCCATTCCTCCGCCTTGGCGTCAAGGCGCGCGGTTGTAATGGTTTATCCTATACTCTCAACTACGCAGATG
AGAAAGGGAAGTTCGATGAACTGGTCGAGGATCAAAACGTGAAGATACTGATTGAACCGAAGGCGCTGATGCATGTAATAGGAACAAAGATGGACTTCGTAGATGACAAA
TTGAGGTATTTGAGAAATCTCTTACCTACAATTTTATGTTTTCAGCTCAATTATCATCCATATTGCTTGGAGCTATTTACAACATGCAAGGATCCCATTAATTTTTTTTT
GCACAGAACAATCGGAGTTTATCTTTATCAATCCAAATTCGAAAGGTCAATGTGGCTGTGGGGAGTCCTTTATGACAACAGGCAGTGCAGAAGCCAACAAAAAATGAGGC
AGTTGGAGCAATGAGCACTGTTAGAAAAACTCAAAACTCAAAACTCACAGTTGCATATTTGTTGTGTATTTTGCTGGAATTACAAACCCTAAACCTTAGAGAGTTCTATG
ACAAGAACTTAAAGCAGCTATTGCACTGGCTAATGAGTTCTTCTGAGGTAATAAAATTCTCCCACGACTTTCTTTTGTTATAGGACTTGGTTACCATAACCATCCTGCTT
GCCTTATAATTGGTTAAGTAATAATCAATCGGTTAAATTTTATGTCATCGATTCAAATAAAATAAATTTTAATTTGAGAAGAACACGAGAAAAGCATTAGATTTATGGTG
ACAGTGATTCTCATTCTTGCAACTCACTATAATTATTCCGTTTTACT
Protein sequenceShow/hide protein sequence
MDTSNPAVFCNGELLNVHSGRKIRAVVQVIQSDGGVVTGKSTDEQHLTVHGLPTAPLMNFVEVVGIAEGNKIINGPTLEPHLVCTKTKCPILQSAVPTCKWGIQKFISVR
ICSYAMRRASSSSFLAAASQKVGPAARRKILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLNYADEKGKFDELVEDQNVKILIEPKALMHVIGTKMDFVDDK
LRYLRNLLPTILCFQLNYHPYCLELFTTCKDPINFFLHRTIGVYLYQSKFERSMWLWGVLYDNRQCRSQQKMRQLEQ