CuGenDBv2

Gene ID	CmoCh04G015140
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Nuclear transport factor 2 (NTF2) family protein
Genome location	Cmo_Chr04:7743374..7746081
RNA-Seq Expression	CmoCh04G015140
Synteny	CmoCh04G015140
Gene Ontology terms	NA
InterPro domains	IPR032710 - NTF2-like domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6601231.1 Exocyst complex component EXO70A1, partial [Cucurbita argyrosperma subsp. sororia]

3.3e-86

92.86

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Query:  MLGDGEITEDPTIEASSKEACDLKATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISP
        MLGDGEITEDPTIEASSKEACDLKATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISP
Subjt:  MLGDGEITEDPTIEASSKEACDLKATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISP

Query:  GKHEITVDNKQHYKFLGRNIDLESLIKL-------------WNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD
        GKHEITVDNKQHYKFLGRNIDLESLIKL             WNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD
Subjt:  GKHEITVDNKQHYKFLGRNIDLESLIKL-------------WNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD

XP_004135041.1 uncharacterized protein LOC101206496 isoform X2 [Cucumis sativus]

8.0e-77

84.07

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Query:  MLGDGEITEDPTIEASSKEACDLKATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISP
        M G GEIT DPTIEA +KEACD K TKR ADDIMPHILNLYGSSATPRDFEIYA DASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEY+  E+LISP
Subjt:  MLGDGEITEDPTIEASSKEACDLKATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISP

Query:  GKHEITVDNKQHYKFLGRNIDLESLIKL-------------WNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD
        GKHEITVDNKQHYKFLGRNIDLESLIKL             WNKKPLLNRETV+LPMVGR LEMTRRCAMLATHAMM FGKD
Subjt:  GKHEITVDNKQHYKFLGRNIDLESLIKL-------------WNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD

XP_022957109.1 uncharacterized protein LOC111458589 [Cucurbita moschata]

3.3e-86

92.86

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Query:  MLGDGEITEDPTIEASSKEACDLKATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISP
        MLGDGEITEDPTIEASSKEACDLKATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISP
Subjt:  MLGDGEITEDPTIEASSKEACDLKATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISP

Query:  GKHEITVDNKQHYKFLGRNIDLESLIKL-------------WNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD
        GKHEITVDNKQHYKFLGRNIDLESLIKL             WNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD
Subjt:  GKHEITVDNKQHYKFLGRNIDLESLIKL-------------WNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD

XP_022986748.1 uncharacterized protein LOC111484382 [Cucurbita maxima]

5.2e-84

91.21

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Query:  MLGDGEITEDPTIEASSKEACDLKATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISP
        M GDGEITEDP IEASSKEACD KATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISP
Subjt:  MLGDGEITEDPTIEASSKEACDLKATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISP

Query:  GKHEITVDNKQHYKFLGRNIDLESLIKL-------------WNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD
        GKHEITVDNKQHYKFLGRNIDLESLIKL             WNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD
Subjt:  GKHEITVDNKQHYKFLGRNIDLESLIKL-------------WNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD

XP_023529231.1 uncharacterized protein LOC111792126 [Cucurbita pepo subsp. pepo]

2.3e-84

91.21

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Query:  MLGDGEITEDPTIEASSKEACDLKATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISP
        M GDGEITEDPTIEA+SKEACD KATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISP
Subjt:  MLGDGEITEDPTIEASSKEACDLKATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISP

Query:  GKHEITVDNKQHYKFLGRNIDLESLIKL-------------WNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD
        GKHEITVDNKQHYKFLGRNIDLESLIKL             WNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD
Subjt:  GKHEITVDNKQHYKFLGRNIDLESLIKL-------------WNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KUR1 Uncharacterized protein

3.9e-77

84.07

Show/hide

Query:  MLGDGEITEDPTIEASSKEACDLKATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISP
        M G GEIT DPTIEA +KEACD K TKR ADDIMPHILNLYGSSATPRDFEIYA DASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEY+  E+LISP
Subjt:  MLGDGEITEDPTIEASSKEACDLKATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISP

Query:  GKHEITVDNKQHYKFLGRNIDLESLIKL-------------WNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD
        GKHEITVDNKQHYKFLGRNIDLESLIKL             WNKKPLLNRETV+LPMVGR LEMTRRCAMLATHAMM FGKD
Subjt:  GKHEITVDNKQHYKFLGRNIDLESLIKL-------------WNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD

A0A1S3BFU1 uncharacterized protein LOC103489375 isoform X2

1.1e-74

82.42

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Query:  MLGDGEITEDPTIEASSKEACDLKATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISP
        M GDGEIT DPTIEA +KEACD K TKR ADDIMPHILNLYGSSATPRDFEIYA DASF+DPLTRA+GVKEIKSAFYSLSKVFSESRIVEY  KE+LISP
Subjt:  MLGDGEITEDPTIEASSKEACDLKATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISP

Query:  GKHEITVDNKQHYKFLGRNIDLESLIKL-------------WNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD
        GKHEI VDNKQHYKFLGRNIDLESLIKL             WNKKPLLNRETV+LPMVGR LEMTRR  MLATHAMM FGKD
Subjt:  GKHEITVDNKQHYKFLGRNIDLESLIKL-------------WNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD

A0A5D3CB20 Nuclear transport factor 2 family protein

1.1e-74

82.42

Show/hide

Query:  MLGDGEITEDPTIEASSKEACDLKATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISP
        M GDGEIT DPTIEA +KEACD K TKR ADDIMPHILNLYGSSATPRDFEIYA DASF+DPLTRA+GVKEIKSAFYSLSKVFSESRIVEY  KE+LISP
Subjt:  MLGDGEITEDPTIEASSKEACDLKATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISP

Query:  GKHEITVDNKQHYKFLGRNIDLESLIKL-------------WNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD
        GKHEI VDNKQHYKFLGRNIDLESLIKL             WNKKPLLNRETV+LPMVGR LEMTRR  MLATHAMM FGKD
Subjt:  GKHEITVDNKQHYKFLGRNIDLESLIKL-------------WNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD

A0A6J1H109 uncharacterized protein LOC111458589

1.6e-86

92.86

Show/hide

Query:  MLGDGEITEDPTIEASSKEACDLKATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISP
        MLGDGEITEDPTIEASSKEACDLKATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISP
Subjt:  MLGDGEITEDPTIEASSKEACDLKATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISP

Query:  GKHEITVDNKQHYKFLGRNIDLESLIKL-------------WNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD
        GKHEITVDNKQHYKFLGRNIDLESLIKL             WNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD
Subjt:  GKHEITVDNKQHYKFLGRNIDLESLIKL-------------WNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD

A0A6J1JHF8 uncharacterized protein LOC111484382

2.5e-84

91.21

Show/hide

Query:  MLGDGEITEDPTIEASSKEACDLKATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISP
        M GDGEITEDP IEASSKEACD KATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISP
Subjt:  MLGDGEITEDPTIEASSKEACDLKATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISP

Query:  GKHEITVDNKQHYKFLGRNIDLESLIKL-------------WNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD
        GKHEITVDNKQHYKFLGRNIDLESLIKL             WNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD
Subjt:  GKHEITVDNKQHYKFLGRNIDLESLIKL-------------WNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G04830.1 Nuclear transport factor 2 (NTF2) family protein

1.5e-57

64.74

Show/hide

Query:  DPTIEASSKEACDLKATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISPGKHEITVDN
        DP  E   K AC+LK+ KRFAD IMPH+LNLYGSSA   DF++YA +ASFEDPLT A GVK+IKSAFYSL KVF ES+IVEY ++E   SPGK EI +DN
Subjt:  DPTIEASSKEACDLKATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISPGKHEITVDN

Query:  KQHYKFLGRNIDLESLIKL-------------WNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD
        KQHYK +GRNID+ SLIKL             W+KKPL NR+TV  P+VGRV+EM RR  MLATHAMM FGKD
Subjt:  KQHYKFLGRNIDLESLIKL-------------WNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD

AT5G04830.2 Nuclear transport factor 2 (NTF2) family protein

1.5e-57

64.74

Show/hide

Query:  DPTIEASSKEACDLKATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISPGKHEITVDN
        DP  E   K AC+LK+ KRFAD IMPH+LNLYGSSA   DF++YA +ASFEDPLT A GVK+IKSAFYSL KVF ES+IVEY ++E   SPGK EI +DN
Subjt:  DPTIEASSKEACDLKATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISPGKHEITVDN

Query:  KQHYKFLGRNIDLESLIKL-------------WNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD
        KQHYK +GRNID+ SLIKL             W+KKPL NR+TV  P+VGRV+EM RR  MLATHAMM FGKD
Subjt:  KQHYKFLGRNIDLESLIKL-------------WNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD

Sequences

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CDS sequence

Show/hide CDS sequence

ATGCTGGGAGATGGTGAAATCACAGAGGATCCAACCATTGAAGCGAGCAGCAAGGAGGCATGCGATTTGAAAGCGACGAAGCGTTTTGCCGACGATATCATGCCTCATAT
TCTCAATCTTTATGGATCTTCTGCAACGCCTCGGGATTTTGAAATCTACGCTGCCGATGCTTCATTCGAGGATCCACTGACGAGAGCTCACGGAGTGAAGGAAATCAAAT
CGGCATTTTATTCTCTGTCCAAGGTCTTTAGTGAATCAAGAATTGTGGAATACAGTGTCAAAGAGAAACTTATTTCCCCTGGAAAACACGAGATTACAGTCGATAATAAG
CAACACTACAAGTTTCTGGGAAGAAACATAGATTTGGAATCCCTCATCAAGTTGTGGAATAAGAAACCACTTTTGAATAGAGAAACAGTGAAGTTACCAATGGTGGGTCG
AGTTTTGGAAATGACTCGCAGATGTGCGATGTTAGCAACTCATGCAATGATGAGATTTGGCAAGGATTGA

mRNA sequence

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GTCGTGGAGCTTCTTCAGGATTCTAGTTCTGCTTCGCAGCGAAGAAAATTGGAGCATTCTCGAAGAACCACACTCGCTCCGGATTCGTTGCTGTTCCTAAAAATGCTGGG
AGATGGTGAAATCACAGAGGATCCAACCATTGAAGCGAGCAGCAAGGAGGCATGCGATTTGAAAGCGACGAAGCGTTTTGCCGACGATATCATGCCTCATATTCTCAATC
TTTATGGATCTTCTGCAACGCCTCGGGATTTTGAAATCTACGCTGCCGATGCTTCATTCGAGGATCCACTGACGAGAGCTCACGGAGTGAAGGAAATCAAATCGGCATTT
TATTCTCTGTCCAAGGTCTTTAGTGAATCAAGAATTGTGGAATACAGTGTCAAAGAGAAACTTATTTCCCCTGGAAAACACGAGATTACAGTCGATAATAAGCAACACTA
CAAGTTTCTGGGAAGAAACATAGATTTGGAATCCCTCATCAAGTTGTGGAATAAGAAACCACTTTTGAATAGAGAAACAGTGAAGTTACCAATGGTGGGTCGAGTTTTGG
AAATGACTCGCAGATGTGCGATGTTAGCAACTCATGCAATGATGAGATTTGGCAAGGATTGAACTGTACCAAACCCATCCATTAAACTGAATCAGTATAGCTTCTGTCTT
TCACTATGTAGATTTACAGTGTATCACCTCAATGGAAATGAGAACAAAGGTTAGTACATTACTACAAGTTTGTATTTTCTAAATTGTACAAGTTTGTATTCTCTAAATTT
TGTTGCGATGATGATGTAAGTAGTTGATCGTTAATTTTAATGTTGTGTGAATTTTAAAAAACATTAAAGGTAGGGTGTGAGATCCCACGTTAGTTGGAGAAAAGAACAAA
GCATTATAAG

Protein sequence

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MLGDGEITEDPTIEASSKEACDLKATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISPGKHEITVDNK
QHYKFLGRNIDLESLIKLWNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD

CmoCh04G015140 (gene) of Cucurbita moschata (Rifu) v1 genome