; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G015220 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G015220
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr04:7782810..7785558
RNA-Seq ExpressionCmoCh04G015220
SyntenyCmoCh04G015220
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BAF01983.1 hypothetical protein, partial [Arabidopsis thaliana]1.8e-0749.47Show/hide
Query:  LISSHMVSKDMAPLRNSKTPSSSSPSG-----WKNPTYDFSATTDRGRIFASITVSRSK---------------FLHSADPSLIKLSSSDLTGIS
        +ISS ++SKD+ PLR S+  SS S S      WKNP    S TT  G  FA  TVSRSK               FLHS DPSLI+LS+SDL GIS
Subjt:  LISSHMVSKDMAPLRNSKTPSSSSPSG-----WKNPTYDFSATTDRGRIFASITVSRSK---------------FLHSADPSLIKLSSSDLTGIS
TrEMBL top hitse value%identityAlignment
Q0WLM4 Uncharacterized protein (Fragment)8.7e-0849.47Show/hide
Query:  LISSHMVSKDMAPLRNSKTPSSSSPSG-----WKNPTYDFSATTDRGRIFASITVSRSK---------------FLHSADPSLIKLSSSDLTGIS
        +ISS ++SKD+ PLR S+  SS S S      WKNP    S TT  G  FA  TVSRSK               FLHS DPSLI+LS+SDL GIS
Subjt:  LISSHMVSKDMAPLRNSKTPSSSSPSG-----WKNPTYDFSATTDRGRIFASITVSRSK---------------FLHSADPSLIKLSSSDLTGIS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGCTTTTCTCCTTTGCTGGCTCAGAGCTCTTTGATTGTGTTGTGTCAATGGATGTTTCCTCATCTGATGGCGCCGTGCTCTTTGACTCGTTTGTGTTATTGGAGGT
TTGCTCCTCTGATGCCTTTGTGTTGTTTGAATGTATGCCTGATTGCACCCTTCGTACAGCCGCTCGCCCAAGGCTGATTTCATCCCATATGGTGTCAAAAGACATGGCGC
CTTTGAGGAACTCGAAAACACCCTCTTCCTCCAGCCCTTCTGGGTGGAAGAATCCAACATATGACTTCTCTGCAACAACAGATAGAGGTCGGATTTTTGCATCAATTACC
GTGTCAAGATCGAAGTTCCTCCATTCTGCTGATCCTTCTCTGATCAAATTGTCCAGTTCAGACTTGACAGGCATTTCTTCTTGGTTGGATAGCAACCAATCAGCAATAAC
AGCAACTAGAGCCGTGCAGGCGCTTTCCCCAGAAGCACAGGCAAAGAAGACTTCAGTTTCGATCTTCAAGCCTCCGTCACGGCTAGTTATCTCCTTCTGCTCCCAAGTAC
CTACAGCGAAGTTATCGTCCCCAAATGCAGCTGCTGATAACTCCAAACTATACCACTGCAAGAAGAAGAAGGAGAAGAGGAGGCCACTATTAGTACGACCTGCTCTTATT
GCAGCTAACCCATCTTTCTCTGCAGACAAAGTCAACGGTGAAGGCGGGGAGAGCGTAACAGGCATAATCGACCTTTGCACCATCATCAAAGATTTCATCTCCTTGAAGGC
TGGAAGAACACACACAGTTTGTGCTGGCCAAGCAATGTTCTGTTTCTTCCTTATGAGAGCTGAGGAAATCTGGCCAAGCAATGTTCTGTTTCTTCCTTATGAGAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGCTTTTCTCCTTTGCTGGCTCAGAGCTCTTTGATTGTGTTGTGTCAATGGATGTTTCCTCATCTGATGGCGCCGTGCTCTTTGACTCGTTTGTGTTATTGGAGGT
TTGCTCCTCTGATGCCTTTGTGTTGTTTGAATGTATGCCTGATTGCACCCTTCGTACAGCCGCTCGCCCAAGGCTGATTTCATCCCATATGGTGTCAAAAGACATGGCGC
CTTTGAGGAACTCGAAAACACCCTCTTCCTCCAGCCCTTCTGGGTGGAAGAATCCAACATATGACTTCTCTGCAACAACAGATAGAGGTCGGATTTTTGCATCAATTACC
GTGTCAAGATCGAAGTTCCTCCATTCTGCTGATCCTTCTCTGATCAAATTGTCCAGTTCAGACTTGACAGGCATTTCTTCTTGGTTGGATAGCAACCAATCAGCAATAAC
AGCAACTAGAGCCGTGCAGGCGCTTTCCCCAGAAGCACAGGCAAAGAAGACTTCAGTTTCGATCTTCAAGCCTCCGTCACGGCTAGTTATCTCCTTCTGCTCCCAAGTAC
CTACAGCGAAGTTATCGTCCCCAAATGCAGCTGCTGATAACTCCAAACTATACCACTGCAAGAAGAAGAAGGAGAAGAGGAGGCCACTATTAGTACGACCTGCTCTTATT
GCAGCTAACCCATCTTTCTCTGCAGACAAAGTCAACGGTGAAGGCGGGGAGAGCGTAACAGGCATAATCGACCTTTGCACCATCATCAAAGATTTCATCTCCTTGAAGGC
TGGAAGAACACACACAGTTTGTGCTGGCCAAGCAATGTTCTGTTTCTTCCTTATGAGAGCTGAGGAAATCTGGCCAAGCAATGTTCTGTTTCTTCCTTATGAGAGCTGA
Protein sequenceShow/hide protein sequence
MVLFSFAGSELFDCVVSMDVSSSDGAVLFDSFVLLEVCSSDAFVLFECMPDCTLRTAARPRLISSHMVSKDMAPLRNSKTPSSSSPSGWKNPTYDFSATTDRGRIFASIT
VSRSKFLHSADPSLIKLSSSDLTGISSWLDSNQSAITATRAVQALSPEAQAKKTSVSIFKPPSRLVISFCSQVPTAKLSSPNAAADNSKLYHCKKKKEKRRPLLVRPALI
AANPSFSADKVNGEGGESVTGIIDLCTIIKDFISLKAGRTHTVCAGQAMFCFFLMRAEEIWPSNVLFLPYES