; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G016030 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G016030
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionHomologous-pairing protein 2 homolog
Genome locationCmo_Chr04:8170795..8172574
RNA-Seq ExpressionCmoCh04G016030
SyntenyCmoCh04G016030
Gene Ontology termsGO:0000709 - meiotic joint molecule formation (biological process)
GO:0007129 - synapsis (biological process)
GO:0010774 - meiotic strand invasion involved in reciprocal meiotic recombination (biological process)
GO:0050790 - regulation of catalytic activity (biological process)
GO:0000794 - condensed nuclear chromosome (cellular component)
GO:0120231 - DNA recombinase auxiliary factor complex (cellular component)
GO:0003690 - double-stranded DNA binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
GO:0120230 - recombinase activator activity (molecular function)
InterPro domainsIPR010776 - Homologous-pairing protein 2, winged helix domain
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR040461 - Homologous-pairing protein 2
IPR040661 - Leucine zipper with capping helix domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601313.1 Homologous-pairing protein 2-like protein, partial [Cucurbita argyrosperma subsp. sororia]1.8e-10698.58Show/hide
Query:  FYSLQNRPLNSQNVADSLQKFNLKKTGVQKALDALADSGRISFKEYGKQKIYLARQDQFKIPNSEELTQMKEANAKLQQHLSEQKKAITQVEEEIRTLQS
        F + QNRPLNSQNVADSLQKFNLKKTGVQKALDALADSGRISFKEYGKQKIYLARQDQFKIPNSEELTQMKEANAKLQQHLSEQKKAITQVEEEIRTLQS
Subjt:  FYSLQNRPLNSQNVADSLQKFNLKKTGVQKALDALADSGRISFKEYGKQKIYLARQDQFKIPNSEELTQMKEANAKLQQHLSEQKKAITQVEEEIRTLQS

Query:  NLTLKEMREKEAMLRKEVKELEEKLETLRGGVTLVSPEDRKAIEQIYSEKLGQWRKRKRMFKDIWDVITENSPKNLKDFKEELGIEYDEDVGVNLQSFSD
        NLTLKEMREKEAMLRKEVKELEEKLETLRGGVTLVSPEDRKAIEQIYSEKLGQWRKRKRMFKDIWDVITENSPKNLKDFKEELGIEYDEDVGVNLQSFSD
Subjt:  NLTLKEMREKEAMLRKEVKELEEKLETLRGGVTLVSPEDRKAIEQIYSEKLGQWRKRKRMFKDIWDVITENSPKNLKDFKEELGIEYDEDVGVNLQSFSD

Query:  MLPQNRKRPRGK
        MLPQNRKRPRGK
Subjt:  MLPQNRKRPRGK

XP_022956936.1 homologous-pairing protein 2 homolog [Cucurbita moschata]1.8e-10698.58Show/hide
Query:  FYSLQNRPLNSQNVADSLQKFNLKKTGVQKALDALADSGRISFKEYGKQKIYLARQDQFKIPNSEELTQMKEANAKLQQHLSEQKKAITQVEEEIRTLQS
        F + QNRPLNSQNVADSLQKFNLKKTGVQKALDALADSGRISFKEYGKQKIYLARQDQFKIPNSEELTQMKEANAKLQQHLSEQKKAITQVEEEIRTLQS
Subjt:  FYSLQNRPLNSQNVADSLQKFNLKKTGVQKALDALADSGRISFKEYGKQKIYLARQDQFKIPNSEELTQMKEANAKLQQHLSEQKKAITQVEEEIRTLQS

Query:  NLTLKEMREKEAMLRKEVKELEEKLETLRGGVTLVSPEDRKAIEQIYSEKLGQWRKRKRMFKDIWDVITENSPKNLKDFKEELGIEYDEDVGVNLQSFSD
        NLTLKEMREKEAMLRKEVKELEEKLETLRGGVTLVSPEDRKAIEQIYSEKLGQWRKRKRMFKDIWDVITENSPKNLKDFKEELGIEYDEDVGVNLQSFSD
Subjt:  NLTLKEMREKEAMLRKEVKELEEKLETLRGGVTLVSPEDRKAIEQIYSEKLGQWRKRKRMFKDIWDVITENSPKNLKDFKEELGIEYDEDVGVNLQSFSD

Query:  MLPQNRKRPRGK
        MLPQNRKRPRGK
Subjt:  MLPQNRKRPRGK

XP_022985544.1 homologous-pairing protein 2 homolog [Cucurbita maxima]1.2e-10597.64Show/hide
Query:  FYSLQNRPLNSQNVADSLQKFNLKKTGVQKALDALADSGRISFKEYGKQKIYLARQDQFKIPNSEELTQMKEANAKLQQHLSEQKKAITQVEEEIRTLQS
        F + QNRPLNSQNVADSLQKFNLKKTGVQKALDALADSGRISFKEYGKQKIYLARQDQFKIPNSEELTQMKEANAKLQQHL+EQKKAITQVEEEIRTLQS
Subjt:  FYSLQNRPLNSQNVADSLQKFNLKKTGVQKALDALADSGRISFKEYGKQKIYLARQDQFKIPNSEELTQMKEANAKLQQHLSEQKKAITQVEEEIRTLQS

Query:  NLTLKEMREKEAMLRKEVKELEEKLETLRGGVTLVSPEDRKAIEQIYSEKLGQWRKRKRMFKDIWDVITENSPKNLKDFKEELGIEYDEDVGVNLQSFSD
        NLTLKEMREKEAMLRKEVKELEEKLETLRGGVTLVSPEDRKAIEQIYSEKLGQWRKRKRMFKDIWDVITENSPKNLK+FKEELGIEYDEDVGVNLQSFSD
Subjt:  NLTLKEMREKEAMLRKEVKELEEKLETLRGGVTLVSPEDRKAIEQIYSEKLGQWRKRKRMFKDIWDVITENSPKNLKDFKEELGIEYDEDVGVNLQSFSD

Query:  MLPQNRKRPRGK
        MLPQNRKRPRGK
Subjt:  MLPQNRKRPRGK

XP_023547702.1 homologous-pairing protein 2 homolog [Cucurbita pepo subsp. pepo]4.1e-10698.11Show/hide
Query:  FYSLQNRPLNSQNVADSLQKFNLKKTGVQKALDALADSGRISFKEYGKQKIYLARQDQFKIPNSEELTQMKEANAKLQQHLSEQKKAITQVEEEIRTLQS
        F + QNRPLNSQNVADSLQKFNLKKTGVQKALDALADSGRISFKEYGKQKIYLARQDQFKIPNSEELTQMKEANAKLQQHL+EQKKAITQVEEEIRTLQS
Subjt:  FYSLQNRPLNSQNVADSLQKFNLKKTGVQKALDALADSGRISFKEYGKQKIYLARQDQFKIPNSEELTQMKEANAKLQQHLSEQKKAITQVEEEIRTLQS

Query:  NLTLKEMREKEAMLRKEVKELEEKLETLRGGVTLVSPEDRKAIEQIYSEKLGQWRKRKRMFKDIWDVITENSPKNLKDFKEELGIEYDEDVGVNLQSFSD
        NLTLKEMREKEAMLRKEVKELEEKLETLRGGVTLVSPEDRKAIEQIYSEKLGQWRKRKRMFKDIWDVITENSPKNLKDFKEELGIEYDEDVGVNLQSFSD
Subjt:  NLTLKEMREKEAMLRKEVKELEEKLETLRGGVTLVSPEDRKAIEQIYSEKLGQWRKRKRMFKDIWDVITENSPKNLKDFKEELGIEYDEDVGVNLQSFSD

Query:  MLPQNRKRPRGK
        MLPQNRKRPRGK
Subjt:  MLPQNRKRPRGK

XP_038893461.1 homologous-pairing protein 2 homolog [Benincasa hispida]1.4e-9891.04Show/hide
Query:  FYSLQNRPLNSQNVADSLQKFNLKKTGVQKALDALADSGRISFKEYGKQKIYLARQDQFKIPNSEELTQMKEANAKLQQHLSEQKKAITQVEEEIRTLQS
        F + QNRPLNSQN ADSLQKFNLKKT VQKALDALADSGRISFKEYGKQKIY+ARQDQF+IPNSEELTQMKEANAKLQQHL E KK I+QVEEEIRTLQS
Subjt:  FYSLQNRPLNSQNVADSLQKFNLKKTGVQKALDALADSGRISFKEYGKQKIYLARQDQFKIPNSEELTQMKEANAKLQQHLSEQKKAITQVEEEIRTLQS

Query:  NLTLKEMREKEAMLRKEVKELEEKLETLRGGVTLVSPEDRKAIEQIYSEKLGQWRKRKRMFKDIWDVITENSPKNLKDFKEELGIEYDEDVGVNLQSFSD
        NLTL++MREKEAMLRKEVKELE+KLE LRGGVTLVSPEDRKAIEQI+SEKL QWRKRKRMFKDIWD ITENSPK+LKDFKEELGIEYDEDVGVNLQSFSD
Subjt:  NLTLKEMREKEAMLRKEVKELEEKLETLRGGVTLVSPEDRKAIEQIYSEKLGQWRKRKRMFKDIWDVITENSPKNLKDFKEELGIEYDEDVGVNLQSFSD

Query:  MLPQNRKRPRGK
        MLPQNRKRPRGK
Subjt:  MLPQNRKRPRGK

TrEMBL top hitse value%identityAlignment
A0A1S3BG28 Homologous-pairing protein 2 homolog6.4e-9789.15Show/hide
Query:  FYSLQNRPLNSQNVADSLQKFNLKKTGVQKALDALADSGRISFKEYGKQKIYLARQDQFKIPNSEELTQMKEANAKLQQHLSEQKKAITQVEEEIRTLQS
        F + QNRPLNSQN ADSLQKFNLKKT VQKALD+LAD+GRISFKEYGKQKIY+ARQDQF+IPNSEELTQMKEANAKLQ+HL E KKAI+QVEEEIRTLQS
Subjt:  FYSLQNRPLNSQNVADSLQKFNLKKTGVQKALDALADSGRISFKEYGKQKIYLARQDQFKIPNSEELTQMKEANAKLQQHLSEQKKAITQVEEEIRTLQS

Query:  NLTLKEMREKEAMLRKEVKELEEKLETLRGGVTLVSPEDRKAIEQIYSEKLGQWRKRKRMFKDIWDVITENSPKNLKDFKEELGIEYDEDVGVNLQSFSD
        NLTL++MREKE MLRKEVKELE+KLE LR GVTLVSPEDRKAIEQIYSEKL QWRKRKRMFKDIWD ITENSPK+LK+FKEELGIEYDEDVGVNLQSFSD
Subjt:  NLTLKEMREKEAMLRKEVKELEEKLETLRGGVTLVSPEDRKAIEQIYSEKLGQWRKRKRMFKDIWDVITENSPKNLKDFKEELGIEYDEDVGVNLQSFSD

Query:  MLPQNRKRPRGK
        MLPQNRKRPRGK
Subjt:  MLPQNRKRPRGK

A0A1S3BG80 Homologous-pairing protein 2 homolog2.4e-9689.1Show/hide
Query:  FYSLQNRPLNSQNVADSLQKFNLKKTGVQKALDALADSGRISFKEYGKQKIYLARQDQFKIPNSEELTQMKEANAKLQQHLSEQKKAITQVEEEIRTLQS
        F + QNRPLNSQN ADSLQKFNLKKT VQKALD+LAD+GRISFKEYGKQKIY+ARQDQF+IPNSEELTQMKEANAKLQ+HL E KKAI+QVEEEIRTLQS
Subjt:  FYSLQNRPLNSQNVADSLQKFNLKKTGVQKALDALADSGRISFKEYGKQKIYLARQDQFKIPNSEELTQMKEANAKLQQHLSEQKKAITQVEEEIRTLQS

Query:  NLTLKEMREKEAMLRKEVKELEEKLETLRGGVTLVSPEDRKAIEQIYSEKLGQWRKRKRMFKDIWDVITENSPKNLKDFKEELGIEYDEDVGVNLQSFSD
        NLTL++MREKE MLRKEVKELE+KLE LR GVTLVSPEDRKAIEQIYSEKL QWRKRKRMFKDIWD ITENSPK+LK+FKEELGIEYDEDVGVNLQSFSD
Subjt:  NLTLKEMREKEAMLRKEVKELEEKLETLRGGVTLVSPEDRKAIEQIYSEKLGQWRKRKRMFKDIWDVITENSPKNLKDFKEELGIEYDEDVGVNLQSFSD

Query:  MLPQNRKRPRG
        MLPQNRKRPRG
Subjt:  MLPQNRKRPRG

A0A5A7SYM2 Homologous-pairing protein 2 homolog6.4e-9789.15Show/hide
Query:  FYSLQNRPLNSQNVADSLQKFNLKKTGVQKALDALADSGRISFKEYGKQKIYLARQDQFKIPNSEELTQMKEANAKLQQHLSEQKKAITQVEEEIRTLQS
        F + QNRPLNSQN ADSLQKFNLKKT VQKALD+LAD+GRISFKEYGKQKIY+ARQDQF+IPNSEELTQMKEANAKLQ+HL E KKAI+QVEEEIRTLQS
Subjt:  FYSLQNRPLNSQNVADSLQKFNLKKTGVQKALDALADSGRISFKEYGKQKIYLARQDQFKIPNSEELTQMKEANAKLQQHLSEQKKAITQVEEEIRTLQS

Query:  NLTLKEMREKEAMLRKEVKELEEKLETLRGGVTLVSPEDRKAIEQIYSEKLGQWRKRKRMFKDIWDVITENSPKNLKDFKEELGIEYDEDVGVNLQSFSD
        NLTL++MREKE MLRKEVKELE+KLE LR GVTLVSPEDRKAIEQIYSEKL QWRKRKRMFKDIWD ITENSPK+LK+FKEELGIEYDEDVGVNLQSFSD
Subjt:  NLTLKEMREKEAMLRKEVKELEEKLETLRGGVTLVSPEDRKAIEQIYSEKLGQWRKRKRMFKDIWDVITENSPKNLKDFKEELGIEYDEDVGVNLQSFSD

Query:  MLPQNRKRPRGK
        MLPQNRKRPRGK
Subjt:  MLPQNRKRPRGK

A0A6J1GYP4 Homologous-pairing protein 2 homolog8.8e-10798.58Show/hide
Query:  FYSLQNRPLNSQNVADSLQKFNLKKTGVQKALDALADSGRISFKEYGKQKIYLARQDQFKIPNSEELTQMKEANAKLQQHLSEQKKAITQVEEEIRTLQS
        F + QNRPLNSQNVADSLQKFNLKKTGVQKALDALADSGRISFKEYGKQKIYLARQDQFKIPNSEELTQMKEANAKLQQHLSEQKKAITQVEEEIRTLQS
Subjt:  FYSLQNRPLNSQNVADSLQKFNLKKTGVQKALDALADSGRISFKEYGKQKIYLARQDQFKIPNSEELTQMKEANAKLQQHLSEQKKAITQVEEEIRTLQS

Query:  NLTLKEMREKEAMLRKEVKELEEKLETLRGGVTLVSPEDRKAIEQIYSEKLGQWRKRKRMFKDIWDVITENSPKNLKDFKEELGIEYDEDVGVNLQSFSD
        NLTLKEMREKEAMLRKEVKELEEKLETLRGGVTLVSPEDRKAIEQIYSEKLGQWRKRKRMFKDIWDVITENSPKNLKDFKEELGIEYDEDVGVNLQSFSD
Subjt:  NLTLKEMREKEAMLRKEVKELEEKLETLRGGVTLVSPEDRKAIEQIYSEKLGQWRKRKRMFKDIWDVITENSPKNLKDFKEELGIEYDEDVGVNLQSFSD

Query:  MLPQNRKRPRGK
        MLPQNRKRPRGK
Subjt:  MLPQNRKRPRGK

A0A6J1JDK5 Homologous-pairing protein 2 homolog5.7e-10697.64Show/hide
Query:  FYSLQNRPLNSQNVADSLQKFNLKKTGVQKALDALADSGRISFKEYGKQKIYLARQDQFKIPNSEELTQMKEANAKLQQHLSEQKKAITQVEEEIRTLQS
        F + QNRPLNSQNVADSLQKFNLKKTGVQKALDALADSGRISFKEYGKQKIYLARQDQFKIPNSEELTQMKEANAKLQQHL+EQKKAITQVEEEIRTLQS
Subjt:  FYSLQNRPLNSQNVADSLQKFNLKKTGVQKALDALADSGRISFKEYGKQKIYLARQDQFKIPNSEELTQMKEANAKLQQHLSEQKKAITQVEEEIRTLQS

Query:  NLTLKEMREKEAMLRKEVKELEEKLETLRGGVTLVSPEDRKAIEQIYSEKLGQWRKRKRMFKDIWDVITENSPKNLKDFKEELGIEYDEDVGVNLQSFSD
        NLTLKEMREKEAMLRKEVKELEEKLETLRGGVTLVSPEDRKAIEQIYSEKLGQWRKRKRMFKDIWDVITENSPKNLK+FKEELGIEYDEDVGVNLQSFSD
Subjt:  NLTLKEMREKEAMLRKEVKELEEKLETLRGGVTLVSPEDRKAIEQIYSEKLGQWRKRKRMFKDIWDVITENSPKNLKDFKEELGIEYDEDVGVNLQSFSD

Query:  MLPQNRKRPRGK
        MLPQNRKRPRGK
Subjt:  MLPQNRKRPRGK

SwissProt top hitse value%identityAlignment
O35047 Homologous-pairing protein 2 homolog3.7e-2538.54Show/hide
Query:  QNRPLNSQNVADSLQK-FNLKKTGVQKALDALADSGRISFKEYGKQKIYLARQDQFKIPNSEELTQMKEANAKLQQHLSEQKKAITQVEEEIRTLQSNLT
        QNRP ++Q+V  +LQK   L K  V KALD LA  G+I  K YGKQKIY A Q+QF   +  +L  +  +   L   +   +++   +E E++ L S LT
Subjt:  QNRPLNSQNVADSLQK-FNLKKTGVQKALDALADSGRISFKEYGKQKIYLARQDQFKIPNSEELTQMKEANAKLQQHLSEQKKAITQVEEEIRTLQSNLT

Query:  LKEMREKEAMLRKEVKELEEKLETLRGGVTLVSPEDRKAIEQIYSEKLGQWRKRKRMFKDIWDVITENSPKNLKDFKEELGIEYDEDVGVNL
          EM+++   L+KE  +  E+L+ ++     V+PE+++ + +   +   +WRKRKRM  ++ D I E  PK+ K F EE+GIE DED  V L
Subjt:  LKEMREKEAMLRKEVKELEEKLETLRGGVTLVSPEDRKAIEQIYSEKLGQWRKRKRMFKDIWDVITENSPKNLKDFKEELGIEYDEDVGVNL

Q63ZL2 Homologous-pairing protein 2 homolog1.5e-2637.32Show/hide
Query:  QLACSATVIFY-SLQNRPLNSQNVADSLQK-FNLKKTGVQKALDALADSGRISFKEYGKQKIYLARQDQFKIPNSEELTQMKEANAKLQQHLSEQKKAIT
        + A S+ ++ Y + QNRP ++Q+V  +LQ+   L KT V K ++ LA  G+I  K YGKQKIY A Q+QF   +  EL  +     +L   L   +++  
Subjt:  QLACSATVIFY-SLQNRPLNSQNVADSLQK-FNLKKTGVQKALDALADSGRISFKEYGKQKIYLARQDQFKIPNSEELTQMKEANAKLQQHLSEQKKAIT

Query:  QVEEEIRTLQSNLTLKEMREKEAMLRKEVKELEEKLETLRGGVTLVSPEDRKAIEQIYSEK---LGQWRKRKRMFKDIWDVITENSPKNLKDFKEELGIE
        Q+E E++ L S+LT +EM ++ + L++E    E KL  ++     V+P ++   E++Y E+     +W+KRKRM  DI+D I E  PK+ K F EE+G+E
Subjt:  QVEEEIRTLQSNLTLKEMREKEAMLRKEVKELEEKLETLRGGVTLVSPEDRKAIEQIYSEK---LGQWRKRKRMFKDIWDVITENSPKNLKDFKEELGIE

Query:  YDEDVGVNL
         DED  V +
Subjt:  YDEDVGVNL

Q91ZY6 Homologous-pairing protein 2 homolog1.6e-2539.06Show/hide
Query:  QNRPLNSQNVADSLQK-FNLKKTGVQKALDALADSGRISFKEYGKQKIYLARQDQFKIPNSEELTQMKEANAKLQQHLSEQKKAITQVEEEIRTLQSNLT
        QNRP ++Q+V  +LQK   L K  V KALD LA  G+I  K YGKQKIY A QDQF   +  +L  +  +   L   +   +++   +E E++ L S LT
Subjt:  QNRPLNSQNVADSLQK-FNLKKTGVQKALDALADSGRISFKEYGKQKIYLARQDQFKIPNSEELTQMKEANAKLQQHLSEQKKAITQVEEEIRTLQSNLT

Query:  LKEMREKEAMLRKEVKELEEKLETLRGGVTLVSPEDRKAIEQIYSEKLGQWRKRKRMFKDIWDVITENSPKNLKDFKEELGIEYDEDVGVNL
          EM+ +   L+KE     E+L+ ++     V+PE+++ + +   +   +WRKRKRM  ++ D I E  PK+ K F EE+GIE DED  V L
Subjt:  LKEMREKEAMLRKEVKELEEKLETLRGGVTLVSPEDRKAIEQIYSEKLGQWRKRKRMFKDIWDVITENSPKNLKDFKEELGIEYDEDVGVNL

Q9FX64 Homologous-pairing protein 2 homolog8.0e-8169.34Show/hide
Query:  FYSLQNRPLNSQNVADSLQKFNLKKTGVQKALDALADSGRISFKEYGKQKIYLARQDQFKIPNSEELTQMKEANAKLQQHLSEQKKAITQVEEEIRTLQS
        F + QN+PLN+QN AD+LQKFNLKKT VQKALD+LAD+G+I+FKEYGKQKIY+ARQDQF+IPNSEEL QMKE NAKLQ+ L E+KK I+ VE EI++LQS
Subjt:  FYSLQNRPLNSQNVADSLQKFNLKKTGVQKALDALADSGRISFKEYGKQKIYLARQDQFKIPNSEELTQMKEANAKLQQHLSEQKKAITQVEEEIRTLQS

Query:  NLTLKEMREKEAMLRKEVKELEEKLETLRGGVTLVSPEDRKAIEQIYSEKLGQWRKRKRMFKDIWDVITENSPKNLKDFKEELGIEYDEDVGVNLQSFSD
        NLTL+E++EK+A LRKEVKE+EEKL  LR G+TLV PED+KA+E +Y++K+ QWRKRKRMF+DIWD +TENSPK++K+ KEELGIEYDEDVG++ Q+++D
Subjt:  NLTLKEMREKEAMLRKEVKELEEKLETLRGGVTLVSPEDRKAIEQIYSEKLGQWRKRKRMFKDIWDVITENSPKNLKDFKEELGIEYDEDVGVNLQSFSD

Query:  MLPQNRKRPRGK
        ++   +KRPRG+
Subjt:  MLPQNRKRPRGK

Q9P2W1 Homologous-pairing protein 2 homolog1.4e-2439.49Show/hide
Query:  QNRPLNSQNVADSLQK-FNLKKTGVQKALDALADSGRISFKEYGKQKIYLARQDQFKIPNSEELTQMKEANAKLQQHLSEQKKAITQVEEEIRTLQSNLT
        QNRP +SQ+V  +LQ+   L K  V K L+ LA  G+I  K YGKQKIY A QDQF + +  +L  +      L   +   +++   +E E++ L S LT
Subjt:  QNRPLNSQNVADSLQK-FNLKKTGVQKALDALADSGRISFKEYGKQKIYLARQDQFKIPNSEELTQMKEANAKLQQHLSEQKKAITQVEEEIRTLQSNLT

Query:  LKEMREKEAMLRKEVKELEEKLETLRGGVTLVSPEDRKAIEQIYSEK---LGQWRKRKRMFKDIWDVITENSPKNLKDFKEELGIEYDEDVGVNL
          EM+++   L+KE     E+L+ ++     V+PE++   EQ+Y E+     +WRKRKRM  ++ D I E  PK+ K F EE+GIE DED  V L
Subjt:  LKEMREKEAMLRKEVKELEEKLETLRGGVTLVSPEDRKAIEQIYSEK---LGQWRKRKRMFKDIWDVITENSPKNLKDFKEELGIEYDEDVGVNL

Arabidopsis top hitse value%identityAlignment
AT1G13330.1 Arabidopsis Hop2 homolog5.7e-8269.34Show/hide
Query:  FYSLQNRPLNSQNVADSLQKFNLKKTGVQKALDALADSGRISFKEYGKQKIYLARQDQFKIPNSEELTQMKEANAKLQQHLSEQKKAITQVEEEIRTLQS
        F + QN+PLN+QN AD+LQKFNLKKT VQKALD+LAD+G+I+FKEYGKQKIY+ARQDQF+IPNSEEL QMKE NAKLQ+ L E+KK I+ VE EI++LQS
Subjt:  FYSLQNRPLNSQNVADSLQKFNLKKTGVQKALDALADSGRISFKEYGKQKIYLARQDQFKIPNSEELTQMKEANAKLQQHLSEQKKAITQVEEEIRTLQS

Query:  NLTLKEMREKEAMLRKEVKELEEKLETLRGGVTLVSPEDRKAIEQIYSEKLGQWRKRKRMFKDIWDVITENSPKNLKDFKEELGIEYDEDVGVNLQSFSD
        NLTL+E++EK+A LRKEVKE+EEKL  LR G+TLV PED+KA+E +Y++K+ QWRKRKRMF+DIWD +TENSPK++K+ KEELGIEYDEDVG++ Q+++D
Subjt:  NLTLKEMREKEAMLRKEVKELEEKLETLRGGVTLVSPEDRKAIEQIYSEKLGQWRKRKRMFKDIWDVITENSPKNLKDFKEELGIEYDEDVGVNLQSFSD

Query:  MLPQNRKRPRGK
        ++   +KRPRG+
Subjt:  MLPQNRKRPRGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATGATATCTTCAACGTAGAAATTAAATCCTTCATTCCTGACTTCGTTTCTAAAATTTCCAGCGATCGTGCTCAACTTCTTCCTTATCCCCGTTCTGTGCTCATTGC
AGCGAAGATTATAAGCTTTTACGCTTTGTTGTACTTATATCTTCGTGTTGTTTACTGTTACCCTAATTTAAGAACTTTTCCGTCTTCGTCGCTTGAGTGTTGGGTAAAAC
ACACATCCGAGCGATTTGTTTCGATGAATCTCCATTTGGCTGCCGAGTGCGTTTGCAATTTCACGATGCAACTCGCTTGCAGCGCTACTGTCATCTTTTATTCGTTGCAA
AATCGTCCACTAAACTCTCAAAATGTTGCTGATTCATTACAAAAATTCAACCTCAAGAAGACAGGGGTGCAAAAGGCACTGGATGCCCTTGCCGATAGTGGACGAATTTC
TTTCAAGGAGTATGGCAAGCAGAAGATATATCTCGCCCGGCAAGACCAATTCAAGATCCCAAACAGCGAGGAACTTACTCAAATGAAGGAAGCAAACGCCAAACTGCAGC
AACATCTAAGCGAGCAAAAAAAGGCTATTACCCAGGTGGAGGAAGAAATTCGAACGTTGCAGTCAAACTTAACGCTGAAAGAAATGCGGGAAAAGGAAGCTATGCTGAGA
AAGGAGGTTAAGGAATTGGAAGAAAAATTGGAAACATTACGCGGAGGTGTTACGTTGGTGAGCCCAGAAGACCGCAAAGCAATCGAGCAGATATACTCTGAGAAACTAGG
CCAGTGGCGAAAGCGAAAAAGGATGTTCAAAGATATATGGGATGTTATCACTGAGAACTCACCTAAGAATCTAAAAGACTTTAAGGAAGAACTTGGCATTGAGTACGATG
AAGATGTGGGCGTGAATTTGCAGTCATTCAGCGACATGTTACCACAAAATCGAAAACGGCCCAGGGGCAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTATGATATCTTCAACGTAGAAATTAAATCCTTCATTCCTGACTTCGTTTCTAAAATTTCCAGCGATCGTGCTCAACTTCTTCCTTATCCCCGTTCTGTGCTCATTGC
AGCGAAGATTATAAGCTTTTACGCTTTGTTGTACTTATATCTTCGTGTTGTTTACTGTTACCCTAATTTAAGAACTTTTCCGTCTTCGTCGCTTGAGTGTTGGGTAAAAC
ACACATCCGAGCGATTTGTTTCGATGAATCTCCATTTGGCTGCCGAGTGCGTTTGCAATTTCACGATGCAACTCGCTTGCAGCGCTACTGTCATCTTTTATTCGTTGCAA
AATCGTCCACTAAACTCTCAAAATGTTGCTGATTCATTACAAAAATTCAACCTCAAGAAGACAGGGGTGCAAAAGGCACTGGATGCCCTTGCCGATAGTGGACGAATTTC
TTTCAAGGAGTATGGCAAGCAGAAGATATATCTCGCCCGGCAAGACCAATTCAAGATCCCAAACAGCGAGGAACTTACTCAAATGAAGGAAGCAAACGCCAAACTGCAGC
AACATCTAAGCGAGCAAAAAAAGGCTATTACCCAGGTGGAGGAAGAAATTCGAACGTTGCAGTCAAACTTAACGCTGAAAGAAATGCGGGAAAAGGAAGCTATGCTGAGA
AAGGAGGTTAAGGAATTGGAAGAAAAATTGGAAACATTACGCGGAGGTGTTACGTTGGTGAGCCCAGAAGACCGCAAAGCAATCGAGCAGATATACTCTGAGAAACTAGG
CCAGTGGCGAAAGCGAAAAAGGATGTTCAAAGATATATGGGATGTTATCACTGAGAACTCACCTAAGAATCTAAAAGACTTTAAGGAAGAACTTGGCATTGAGTACGATG
AAGATGTGGGCGTGAATTTGCAGTCATTCAGCGACATGTTACCACAAAATCGAAAACGGCCCAGGGGCAAGTGAGTGATAACATAAAATGGAGCGTCCAAGTAGAGCAAA
TGCAGGTAGATTCTGTCTGCCTAAAGGTTTGCTTTTGTATCAGGATTACTTATCAAGTTGTTTTCATTGATCCATGCTAAGTTGAAGAAACAATTTATTAACTAAAATGC
TGAGTAAAAGAAATTGCCGTCCTTGACACAATTTTTGTCGAATGGGTTTCTACTGTATTCTATAATTTACTTGGTCAGTGAGGTTCTTTCCCTCAATTGACTGAACTGTG
AACTAAACTTCTAGTGGTCATGCAATAAAAGAGGTAATAGTCTCTGCTGTTGTGTGGACTCGAGAAGAAAGATTA
Protein sequenceShow/hide protein sequence
MYDIFNVEIKSFIPDFVSKISSDRAQLLPYPRSVLIAAKIISFYALLYLYLRVVYCYPNLRTFPSSSLECWVKHTSERFVSMNLHLAAECVCNFTMQLACSATVIFYSLQ
NRPLNSQNVADSLQKFNLKKTGVQKALDALADSGRISFKEYGKQKIYLARQDQFKIPNSEELTQMKEANAKLQQHLSEQKKAITQVEEEIRTLQSNLTLKEMREKEAMLR
KEVKELEEKLETLRGGVTLVSPEDRKAIEQIYSEKLGQWRKRKRMFKDIWDVITENSPKNLKDFKEELGIEYDEDVGVNLQSFSDMLPQNRKRPRGK