; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G016220 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G016220
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionDNL-type domain-containing protein
Genome locationCmo_Chr04:8281122..8282938
RNA-Seq ExpressionCmoCh04G016220
SyntenyCmoCh04G016220
Gene Ontology termsGO:0006457 - protein folding (biological process)
GO:0030150 - protein import into mitochondrial matrix (biological process)
GO:0050821 - protein stabilization (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0008270 - zinc ion binding (molecular function)
GO:0051087 - chaperone binding (molecular function)
InterPro domainsIPR007853 - Zinc finger, DNL-type
IPR024158 - Mitochondrial import protein TIM15


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7032119.1 DNL-type zinc finger protein [Cucurbita argyrosperma subsp. argyrosperma]3.2e-8999.41Show/hide
Query:  MAAAKTQCFSSPALLQQSFNPSQTRPHPSINAFRPIVSSKANPSNGFFIRSRCFRTAPVTRENRNKVLTVSRLVDGNSGDDDESAQRNSDTGAAIDIKLP
        MAAAKT CFSSPALLQQSFNPSQTRPHPSINAFRPIVSSKANPSNGFFIRSRCFRTAPVTRENRNKVLTVSRLVDGNSGDDDESAQRNSDTGAAIDIKLP
Subjt:  MAAAKTQCFSSPALLQQSFNPSQTRPHPSINAFRPIVSSKANPSNGFFIRSRCFRTAPVTRENRNKVLTVSRLVDGNSGDDDESAQRNSDTGAAIDIKLP

Query:  RRSLLVTFTCNQCGDRTKRLINRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFREDDVDVNSNSDQV
        RRSLLVTFTCNQCGDRTKRLINRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFREDDVDVNSNSDQV
Subjt:  RRSLLVTFTCNQCGDRTKRLINRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFREDDVDVNSNSDQV

XP_022956509.1 uncharacterized protein LOC111458229 isoform X1 [Cucurbita moschata]4.9e-90100Show/hide
Query:  MAAAKTQCFSSPALLQQSFNPSQTRPHPSINAFRPIVSSKANPSNGFFIRSRCFRTAPVTRENRNKVLTVSRLVDGNSGDDDESAQRNSDTGAAIDIKLP
        MAAAKTQCFSSPALLQQSFNPSQTRPHPSINAFRPIVSSKANPSNGFFIRSRCFRTAPVTRENRNKVLTVSRLVDGNSGDDDESAQRNSDTGAAIDIKLP
Subjt:  MAAAKTQCFSSPALLQQSFNPSQTRPHPSINAFRPIVSSKANPSNGFFIRSRCFRTAPVTRENRNKVLTVSRLVDGNSGDDDESAQRNSDTGAAIDIKLP

Query:  RRSLLVTFTCNQCGDRTKRLINRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFREDDVDVNSNSDQV
        RRSLLVTFTCNQCGDRTKRLINRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFREDDVDVNSNSDQV
Subjt:  RRSLLVTFTCNQCGDRTKRLINRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFREDDVDVNSNSDQV

XP_022956510.1 mitochondrial protein import protein ZIM17 isoform X2 [Cucurbita moschata]1.3e-8798.82Show/hide
Query:  MAAAKTQCFSSPALLQQSFNPSQTRPHPSINAFRPIVSSKANPSNGFFIRSRCFRTAPVTRENRNKVLTVSRLVDGNSGDDDESAQRNSDTGAAIDIKLP
        MAAAKTQCFSSPALLQQSFNPSQTRPHPSINAFRPIVSSKANPSNGFFI  RCFRTAPVTRENRNKVLTVSRLVDGNSGDDDESAQRNSDTGAAIDIKLP
Subjt:  MAAAKTQCFSSPALLQQSFNPSQTRPHPSINAFRPIVSSKANPSNGFFIRSRCFRTAPVTRENRNKVLTVSRLVDGNSGDDDESAQRNSDTGAAIDIKLP

Query:  RRSLLVTFTCNQCGDRTKRLINRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFREDDVDVNSNSDQV
        RRSLLVTFTCNQCGDRTKRLINRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFREDDVDVNSNSDQV
Subjt:  RRSLLVTFTCNQCGDRTKRLINRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFREDDVDVNSNSDQV

XP_022987077.1 DNL-type zinc finger protein isoform X1 [Cucurbita maxima]9.5e-8696.47Show/hide
Query:  MAAAKTQCFSSPALLQQSFNPSQTRPHPSINAFRPIVSSKANPSNGFFIRSRCFRTAPVTRENRNKVLTVSRLVDGNSGDDDESAQRNSDTGAAIDIKLP
        MAAAKT CFSSPALLQQSFNPSQTRPHPSI AFRPIVSSKANPSNGFFI SR FRTAPVTRENRNKVLTVSRLVDG+SGDDDESAQRNSDTGAAIDIKLP
Subjt:  MAAAKTQCFSSPALLQQSFNPSQTRPHPSINAFRPIVSSKANPSNGFFIRSRCFRTAPVTRENRNKVLTVSRLVDGNSGDDDESAQRNSDTGAAIDIKLP

Query:  RRSLLVTFTCNQCGDRTKRLINRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFREDDVDVNSNSDQV
        RRSLLVTFTCNQCGDRTKRLINRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFR+DDVDVNSNSDQV
Subjt:  RRSLLVTFTCNQCGDRTKRLINRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFREDDVDVNSNSDQV

XP_023511593.1 DNL-type zinc finger protein isoform X1 [Cucurbita pepo subsp. pepo]1.2e-8597.06Show/hide
Query:  MAAAKTQCFSSPALLQQSFNPSQTRPHPSINAFRPIVSSKANPSNGFFIRSRCFRTAPVTRENRNKVLTVSRLVDGNSGDDDESAQRNSDTGAAIDIKLP
        MAAAKT C SSPALLQQSFNPSQTRPHPSI AFRPIVSSKANPSNGFFIRSR FRTAPVTRENRNKVLTVSRLVDGNSG DDESAQRNSDTGAAIDIKLP
Subjt:  MAAAKTQCFSSPALLQQSFNPSQTRPHPSINAFRPIVSSKANPSNGFFIRSRCFRTAPVTRENRNKVLTVSRLVDGNSGDDDESAQRNSDTGAAIDIKLP

Query:  RRSLLVTFTCNQCGDRTKRLINRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFREDDVDVNSNSDQV
        RRSLLVTFTCNQCGDRTKRLINRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFREDDVDVNSNSDQV
Subjt:  RRSLLVTFTCNQCGDRTKRLINRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFREDDVDVNSNSDQV

TrEMBL top hitse value%identityAlignment
A0A0A0KR03 DNL-type domain-containing protein5.9e-7384.12Show/hide
Query:  MAAAKTQCFSSPALLQQSFNPSQTRPHPSINAFRPIVSSKANPSNGFFIRSRCFRTAPVTRENRNKVLTVSRLVDGNSGDDDESAQRNSDTGAAIDIKLP
        MAAA T  FSSP LLQ SFNPSQTRPHPSI +F+PIVSSKANPSNG FIRSR F TAPV+RE R KVLTVS LVDG +GDDDE +QRNSDTGAAIDIKLP
Subjt:  MAAAKTQCFSSPALLQQSFNPSQTRPHPSINAFRPIVSSKANPSNGFFIRSRCFRTAPVTRENRNKVLTVSRLVDGNSGDDDESAQRNSDTGAAIDIKLP

Query:  RRSLLVTFTCNQCGDRTKRLINRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFREDDVDVNSNSDQV
        RRSL+VTFTCNQC +RTKRLINRLAYERGLVFVQCAGC KYHKLVDNLGLIVEYDFRE+DVD++S+SDQV
Subjt:  RRSLLVTFTCNQCGDRTKRLINRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFREDDVDVNSNSDQV

A0A6J1GXZ4 mitochondrial protein import protein ZIM17 isoform X26.4e-8898.82Show/hide
Query:  MAAAKTQCFSSPALLQQSFNPSQTRPHPSINAFRPIVSSKANPSNGFFIRSRCFRTAPVTRENRNKVLTVSRLVDGNSGDDDESAQRNSDTGAAIDIKLP
        MAAAKTQCFSSPALLQQSFNPSQTRPHPSINAFRPIVSSKANPSNGFFI  RCFRTAPVTRENRNKVLTVSRLVDGNSGDDDESAQRNSDTGAAIDIKLP
Subjt:  MAAAKTQCFSSPALLQQSFNPSQTRPHPSINAFRPIVSSKANPSNGFFIRSRCFRTAPVTRENRNKVLTVSRLVDGNSGDDDESAQRNSDTGAAIDIKLP

Query:  RRSLLVTFTCNQCGDRTKRLINRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFREDDVDVNSNSDQV
        RRSLLVTFTCNQCGDRTKRLINRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFREDDVDVNSNSDQV
Subjt:  RRSLLVTFTCNQCGDRTKRLINRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFREDDVDVNSNSDQV

A0A6J1GZ90 uncharacterized protein LOC111458229 isoform X12.4e-90100Show/hide
Query:  MAAAKTQCFSSPALLQQSFNPSQTRPHPSINAFRPIVSSKANPSNGFFIRSRCFRTAPVTRENRNKVLTVSRLVDGNSGDDDESAQRNSDTGAAIDIKLP
        MAAAKTQCFSSPALLQQSFNPSQTRPHPSINAFRPIVSSKANPSNGFFIRSRCFRTAPVTRENRNKVLTVSRLVDGNSGDDDESAQRNSDTGAAIDIKLP
Subjt:  MAAAKTQCFSSPALLQQSFNPSQTRPHPSINAFRPIVSSKANPSNGFFIRSRCFRTAPVTRENRNKVLTVSRLVDGNSGDDDESAQRNSDTGAAIDIKLP

Query:  RRSLLVTFTCNQCGDRTKRLINRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFREDDVDVNSNSDQV
        RRSLLVTFTCNQCGDRTKRLINRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFREDDVDVNSNSDQV
Subjt:  RRSLLVTFTCNQCGDRTKRLINRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFREDDVDVNSNSDQV

A0A6J1J9C7 DNL-type zinc finger protein isoform X14.6e-8696.47Show/hide
Query:  MAAAKTQCFSSPALLQQSFNPSQTRPHPSINAFRPIVSSKANPSNGFFIRSRCFRTAPVTRENRNKVLTVSRLVDGNSGDDDESAQRNSDTGAAIDIKLP
        MAAAKT CFSSPALLQQSFNPSQTRPHPSI AFRPIVSSKANPSNGFFI SR FRTAPVTRENRNKVLTVSRLVDG+SGDDDESAQRNSDTGAAIDIKLP
Subjt:  MAAAKTQCFSSPALLQQSFNPSQTRPHPSINAFRPIVSSKANPSNGFFIRSRCFRTAPVTRENRNKVLTVSRLVDGNSGDDDESAQRNSDTGAAIDIKLP

Query:  RRSLLVTFTCNQCGDRTKRLINRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFREDDVDVNSNSDQV
        RRSLLVTFTCNQCGDRTKRLINRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFR+DDVDVNSNSDQV
Subjt:  RRSLLVTFTCNQCGDRTKRLINRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFREDDVDVNSNSDQV

A0A6J1JD66 DNL-type zinc finger protein isoform X28.7e-8596.47Show/hide
Query:  MAAAKTQCFSSPALLQQSFNPSQTRPHPSINAFRPIVSSKANPSNGFFIRSRCFRTAPVTRENRNKVLTVSRLVDGNSGDDDESAQRNSDTGAAIDIKLP
        MAAAKT CFSSPALLQQSFNPSQTRPHPSI AFRPIVSSKANPSNGFFIRS  FRTAPVTRENRNKVLTVSRLVDG+SGDDDESAQRNSDTGAAIDIKLP
Subjt:  MAAAKTQCFSSPALLQQSFNPSQTRPHPSINAFRPIVSSKANPSNGFFIRSRCFRTAPVTRENRNKVLTVSRLVDGNSGDDDESAQRNSDTGAAIDIKLP

Query:  RRSLLVTFTCNQCGDRTKRLINRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFREDDVDVNSNSDQV
        RRSLLVTFTCNQCGDRTKRLINRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFR+DDVDVNSNSDQV
Subjt:  RRSLLVTFTCNQCGDRTKRLINRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFREDDVDVNSNSDQV

SwissProt top hitse value%identityAlignment
A1L1P7 DNL-type zinc finger protein2.9e-0541.86Show/hide
Query:  VTFTCNQCGDRTKRLINRLAYERGLVFVQCAGCLKYHKLVDNL
        + +TC  C  R+ + I++LAY +G+V V C GC  +H + DNL
Subjt:  VTFTCNQCGDRTKRLINRLAYERGLVFVQCAGCLKYHKLVDNL

Q0IH40 DNL-type zinc finger protein5.9e-0633.33Show/hide
Query:  PRRSLLVTFTCNQCGDRTKRLINRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFRED
        P     + +TC  C  R+ + I+++AY +G+V V+C GC  +H + DNLG   + + R +
Subjt:  PRRSLLVTFTCNQCGDRTKRLINRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFRED

Q5SXM8 DNL-type zinc finger protein1.6e-0645.45Show/hide
Query:  VTFTCNQCGDRTKRLINRLAYERGLVFVQCAGCLKYHKLVDNLG
        + +TC  CG R+ + I++LAY +G+V V C GC  +H + DNLG
Subjt:  VTFTCNQCGDRTKRLINRLAYERGLVFVQCAGCLKYHKLVDNLG

Q9D113 DNL-type zinc finger protein7.8e-0644.19Show/hide
Query:  VTFTCNQCGDRTKRLINRLAYERGLVFVQCAGCLKYHKLVDNL
        + +TC  CG R+ + I++LAY +G+V V C GC  +H + DNL
Subjt:  VTFTCNQCGDRTKRLINRLAYERGLVFVQCAGCLKYHKLVDNL

Arabidopsis top hitse value%identityAlignment
AT1G68730.1 Zim17-type zinc finger protein1.9e-3149.41Show/hide
Query:  AKTQCFSSPALLQQSFNPSQTRP---HPSINAFRP--IVSSKANPSNGFFIRSRCFRTAP-VTRENRNKVLTV-SRLVDGNSGDDDESAQRNSDTGAAID
        A T    SP +L   ++P  T+P   H S + ++P      + NP +    RS+  R    VT + RN+  +V   L D +  + DE +  +++  A+ID
Subjt:  AKTQCFSSPALLQQSFNPSQTRP---HPSINAFRP--IVSSKANPSNGFFIRSRCFRTAP-VTRENRNKVLTV-SRLVDGNSGDDDESAQRNSDTGAAID

Query:  IKLPRRSLLVTFTCNQCGDRTKRLINRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFREDDVDVNSN
        IKLPRRSL V FTCN CG+RTKRLINR AYE+GLVFVQCAGCLK+HKLVDNLGLIVEYDFRE   D+ ++
Subjt:  IKLPRRSLLVTFTCNQCGDRTKRLINRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFREDDVDVNSN

AT3G54826.1 Zim17-type zinc finger protein1.6e-0629.23Show/hide
Query:  SNGFFIRSRCF-----RTAPVTRENRNKVLTVSRLVDGNSGDDDESAQRNSDTGAAIDIKL---------PRRSLLVTFTCNQCGDRTKRLINRLAYERG
        SN  F RS  +     R   V RE     +T    V  +S    ESA+  S    + ++ +         PR   ++ FTC  C  R+ ++ +R +YE G
Subjt:  SNGFFIRSRCF-----RTAPVTRENRNKVLTVSRLVDGNSGDDDESAQRNSDTGAAIDIKL---------PRRSLLVTFTCNQCGDRTKRLINRLAYERG

Query:  LVFVQCAGCLKYHKLVDNLGLIVEYDFRED
        +V V+C GC   H + D  G   E    ED
Subjt:  LVFVQCAGCLKYHKLVDNLGLIVEYDFRED

AT5G27280.1 Zim17-type zinc finger protein3.0e-1333.33Show/hide
Query:  AAAKTQCFSSPALLQQSFNPSQTRPHPSINAFRPIVSSK-ANPSNGFFIRSRCFRTAPVTRENRNKVLTVSRLVDG---NSGDDDESAQRNSDTGA----
        AA      SSP  +      + + P P I         K  +P +     S  FR   ++ +    ++  +  V G    SG +  S    +DT      
Subjt:  AAAKTQCFSSPALLQQSFNPSQTRPHPSINAFRPIVSSK-ANPSNGFFIRSRCFRTAPVTRENRNKVLTVSRLVDG---NSGDDDESAQRNSDTGA----

Query:  --AIDIKLPRRSLLVTFTCNQCGDRTKRLINRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDF
          ++  K PRR + V FTCN CG RT R IN  AY  G VFVQC GC  +HKLVDNL L  E  +
Subjt:  --AIDIKLPRRSLLVTFTCNQCGDRTKRLINRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCGGCAAAGACACAGTGTTTTTCGTCTCCCGCGCTTCTTCAGCAATCCTTTAACCCTTCCCAGACTCGGCCGCATCCATCTATCAACGCATTCAGACCTATCGT
CTCTTCGAAAGCAAACCCTAGCAATGGCTTCTTCATTAGGAGTAGATGCTTTCGTACAGCACCGGTTACTCGGGAAAACCGAAATAAGGTGCTTACGGTTTCAAGATTGG
TGGATGGTAATTCTGGCGATGACGATGAATCTGCACAGAGAAATTCGGATACGGGGGCAGCCATTGATATAAAGCTTCCAAGAAGAAGTTTGCTGGTAACATTTACCTGT
AACCAATGTGGTGATAGAACGAAGAGGCTCATCAATCGATTAGCTTACGAACGGGGGCTTGTTTTTGTTCAGTGTGCAGGGTGTCTAAAGTATCACAAACTGGTTGACAA
TCTTGGTCTTATTGTAGAGTATGACTTCCGAGAGGACGACGTGGATGTGAACTCGAATTCAGATCAAGTTTGA
mRNA sequenceShow/hide mRNA sequence
GGTAGTTGGAAGAATACGACATGTCGGCCTTCTAGAGTATGTAGAAAGCACCTGGAGGGGAGCGTACTGTATAAGCGACCACCGAATCCATGGCAGCGGCAAAGACACAG
TGTTTTTCGTCTCCCGCGCTTCTTCAGCAATCCTTTAACCCTTCCCAGACTCGGCCGCATCCATCTATCAACGCATTCAGACCTATCGTCTCTTCGAAAGCAAACCCTAG
CAATGGCTTCTTCATTAGGAGTAGATGCTTTCGTACAGCACCGGTTACTCGGGAAAACCGAAATAAGGTGCTTACGGTTTCAAGATTGGTGGATGGTAATTCTGGCGATG
ACGATGAATCTGCACAGAGAAATTCGGATACGGGGGCAGCCATTGATATAAAGCTTCCAAGAAGAAGTTTGCTGGTAACATTTACCTGTAACCAATGTGGTGATAGAACG
AAGAGGCTCATCAATCGATTAGCTTACGAACGGGGGCTTGTTTTTGTTCAGTGTGCAGGGTGTCTAAAGTATCACAAACTGGTTGACAATCTTGGTCTTATTGTAGAGTA
TGACTTCCGAGAGGACGACGTGGATGTGAACTCGAATTCAGATCAAGTTTGATGTGTTTAAATGGTGTCGTTTCCATGTACGACTTTCCTTTCGAATCGTTGTTGAAATA
TCATTTACATTGCTGATGCACCCTTTTTTTTCCTTATCCCCCTTAGTTATTTGCAATCCCACTGATTCCTCCTGGGACTGATATGGCAGGCAAAATGGATTGTTGGCTAT
TGCATTTGATCGATAATGATTATAGAAAAGAAAGGTTGTAGGCATCAAAGAATAACCTATTTATTGTCGATCCAAGCAAGAGCACGATGTATAAGACACCAATTATCTTT
GATAGTTCGTTCTCCGATTCTTACGATTGTTAGACCTCCAAAAAAGAGAATAATTGAACTGATCATCTCTTTTTGAATCAACAGAACAATATGTGGAAGATG
Protein sequenceShow/hide protein sequence
MAAAKTQCFSSPALLQQSFNPSQTRPHPSINAFRPIVSSKANPSNGFFIRSRCFRTAPVTRENRNKVLTVSRLVDGNSGDDDESAQRNSDTGAAIDIKLPRRSLLVTFTC
NQCGDRTKRLINRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFREDDVDVNSNSDQV