; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G016400 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G016400
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr04:8381556..8383319
RNA-Seq ExpressionCmoCh04G016400
SyntenyCmoCh04G016400
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648779.1 hypothetical protein Csa_009128 [Cucumis sativus]4.8e-3257.34Show/hide
Query:  EVPSYCPAMKNAGAINMSPETSFPQHFHILGKACSRLDISTNLMYCILCCSFKTVTLILLFPYEQVNGNPVPTVIFKGLPSTFHAFLLSTVMAFSGAFNA
        +VP Y   MKN   IN SP+T F QHFHIL                                   VNGN VP +IFKGLPSTFHAFLLS VMAFSGAFNA
Subjt:  EVPSYCPAMKNAGAINMSPETSFPQHFHILGKACSRLDISTNLMYCILCCSFKTVTLILLFPYEQVNGNPVPTVIFKGLPSTFHAFLLSTVMAFSGAFNA

Query:  LMLSANKPKIARFCSYYSMAFMASAVVLLIWAVYQTVFNRRQW
        LML+ NKPKIA+FCSYYS+ FM SAVVL  WAV+QTVFN RQW
Subjt:  LMLSANKPKIARFCSYYSMAFMASAVVLLIWAVYQTVFNRRQW

KAG6601352.1 hypothetical protein SDJN03_06585, partial [Cucurbita argyrosperma subsp. sororia]1.5e-70100Show/hide
Query:  MKNAGAINMSPETSFPQHFHILGKACSRLDISTNLMYCILCCSFKTVTLILLFPYEQVNGNPVPTVIFKGLPSTFHAFLLSTVMAFSGAFNALMLSANKP
        MKNAGAINMSPETSFPQHFHILGKACSRLDISTNLMYCILCCSFKTVTLILLFPYEQVNGNPVPTVIFKGLPSTFHAFLLSTVMAFSGAFNALMLSANKP
Subjt:  MKNAGAINMSPETSFPQHFHILGKACSRLDISTNLMYCILCCSFKTVTLILLFPYEQVNGNPVPTVIFKGLPSTFHAFLLSTVMAFSGAFNALMLSANKP

Query:  KIARFCSYYSMAFMASAVVLLIWAVYQTVFNRRQWQD
        KIARFCSYYSMAFMASAVVLLIWAVYQTVFNRRQWQD
Subjt:  KIARFCSYYSMAFMASAVVLLIWAVYQTVFNRRQWQD

KAG6601353.1 hypothetical protein SDJN03_06586, partial [Cucurbita argyrosperma subsp. sororia]2.3e-5098.97Show/hide
Query:  RRNLWRDEQSYGRLKSETQIPLPDAPGTVRPWNWIALEFINHVQWKCAMLQCVESPSIERHCVNKSDRDKACFMTLRKENGGGSGGGGGELEAMAVM
        RRNLWRDEQSYGRLKSETQIPLPDAPGTVRPWNWIALEFINHVQWKCAMLQCVESPSIERHCVNKSDRDKACFMTLRKENGGGSGGGGGELEAMAV+
Subjt:  RRNLWRDEQSYGRLKSETQIPLPDAPGTVRPWNWIALEFINHVQWKCAMLQCVESPSIERHCVNKSDRDKACFMTLRKENGGGSGGGGGELEAMAVM

KAG7032138.1 hypothetical protein SDJN02_06181, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-20100Show/hide
Query:  MEGLKMTINLQLIIFLILDGLSTDHLKSESKKAAIDRPNTDQIIQHKLPGRKEIAI
        MEGLKMTINLQLIIFLILDGLSTDHLKSESKKAAIDRPNTDQIIQHKLPGRKEIAI
Subjt:  MEGLKMTINLQLIIFLILDGLSTDHLKSESKKAAIDRPNTDQIIQHKLPGRKEIAI

XP_022992466.1 uncharacterized protein LOC111488762 [Cucurbita maxima]5.4e-7699.31Show/hide
Query:  EVPSYCPAMKNAGAINMSPETSFPQHFHILGKACSRLDISTNLMYCILCCSFKTVTLILLFPYEQVNGNPVPTVIFKGLPSTFHAFLLSTVMAFSGAFNA
        EVPSYCPAMKNAGAINMSPETSFPQHFHILGKACSRLDISTNLMYCILCCSFKTVTLILLFPYEQVNGNPVPT+IFKGLPSTFHAFLLSTVMAFSGAFNA
Subjt:  EVPSYCPAMKNAGAINMSPETSFPQHFHILGKACSRLDISTNLMYCILCCSFKTVTLILLFPYEQVNGNPVPTVIFKGLPSTFHAFLLSTVMAFSGAFNA

Query:  LMLSANKPKIARFCSYYSMAFMASAVVLLIWAVYQTVFNRRQWQD
        LMLSANKPKIARFCSYYSMAFMASAVVLLIWAVYQTVFNRRQWQD
Subjt:  LMLSANKPKIARFCSYYSMAFMASAVVLLIWAVYQTVFNRRQWQD

TrEMBL top hitse value%identityAlignment
A0A0A0KT20 Uncharacterized protein4.4e-5578.32Show/hide
Query:  EVPSYCPAMKNAGAINMSPETSFPQHFHILGKACSRLDISTNLMYCILCCSFKTVTLILLFPYEQVNGNPVPTVIFKGLPSTFHAFLLSTVMAFSGAFNA
        +VP Y   MKN   IN SP+T F QHFHILGK CS LDISTNL+Y ILC SFKTVTLILLFPYEQVNGN VP +IFKGLPSTFHAFLLS VMAFSGAFNA
Subjt:  EVPSYCPAMKNAGAINMSPETSFPQHFHILGKACSRLDISTNLMYCILCCSFKTVTLILLFPYEQVNGNPVPTVIFKGLPSTFHAFLLSTVMAFSGAFNA

Query:  LMLSANKPKIARFCSYYSMAFMASAVVLLIWAVYQTVFNRRQW
        LML+ NKPKIA+FCSYYS+ FM SAVVL  WAV+QTVFN RQW
Subjt:  LMLSANKPKIARFCSYYSMAFMASAVVLLIWAVYQTVFNRRQW

A0A5B7B2L8 Uncharacterized protein (Fragment)1.7e-1956.67Show/hide
Query:  LMYCILCCSFKTVTLILLFPYEQVNGNPVPTVIFKGLPSTFHAFLLSTVMAFSGAFNALMLSANKPKIARFCSYYSMAFMASAVVLLIWA
        ++  IL  SF T  +++  PYE ++GNPVPT+IFKGLPS FHAFL+  + AFSGA+  LM+  +KP++A FC Y SMA MASAV L+IWA
Subjt:  LMYCILCCSFKTVTLILLFPYEQVNGNPVPTVIFKGLPSTFHAFLLSTVMAFSGAFNALMLSANKPKIARFCSYYSMAFMASAVVLLIWA

A0A5B7B2W8 Uncharacterized protein (Fragment)1.0e-1957.78Show/hide
Query:  LMYCILCCSFKTVTLILLFPYEQVNGNPVPTVIFKGLPSTFHAFLLSTVMAFSGAFNALMLSANKPKIARFCSYYSMAFMASAVVLLIWA
        ++  IL  SF T  +++  PYE ++GNPVPT+IFKGLPS FHAFL+  + AFSGA+  LM+  +KP++A FC Y SMA MASAV LLIWA
Subjt:  LMYCILCCSFKTVTLILLFPYEQVNGNPVPTVIFKGLPSTFHAFLLSTVMAFSGAFNALMLSANKPKIARFCSYYSMAFMASAVVLLIWA

A0A5B7B649 Uncharacterized protein (Fragment)1.7e-1956.67Show/hide
Query:  LMYCILCCSFKTVTLILLFPYEQVNGNPVPTVIFKGLPSTFHAFLLSTVMAFSGAFNALMLSANKPKIARFCSYYSMAFMASAVVLLIWA
        ++  IL  SF T  +++  PYE ++GNPVPT+IFKGLPS FHAFL+  + AFSGA+  LM+  +KP++A FC Y SMA MASAV L+IWA
Subjt:  LMYCILCCSFKTVTLILLFPYEQVNGNPVPTVIFKGLPSTFHAFLLSTVMAFSGAFNALMLSANKPKIARFCSYYSMAFMASAVVLLIWA

A0A6J1JTM5 uncharacterized protein LOC1114887622.6e-7699.31Show/hide
Query:  EVPSYCPAMKNAGAINMSPETSFPQHFHILGKACSRLDISTNLMYCILCCSFKTVTLILLFPYEQVNGNPVPTVIFKGLPSTFHAFLLSTVMAFSGAFNA
        EVPSYCPAMKNAGAINMSPETSFPQHFHILGKACSRLDISTNLMYCILCCSFKTVTLILLFPYEQVNGNPVPT+IFKGLPSTFHAFLLSTVMAFSGAFNA
Subjt:  EVPSYCPAMKNAGAINMSPETSFPQHFHILGKACSRLDISTNLMYCILCCSFKTVTLILLFPYEQVNGNPVPTVIFKGLPSTFHAFLLSTVMAFSGAFNA

Query:  LMLSANKPKIARFCSYYSMAFMASAVVLLIWAVYQTVFNRRQWQD
        LMLSANKPKIARFCSYYSMAFMASAVVLLIWAVYQTVFNRRQWQD
Subjt:  LMLSANKPKIARFCSYYSMAFMASAVVLLIWAVYQTVFNRRQWQD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGCCTTAAAATGACAATAAATCTTCAATTGATTATATTTTTAATTTTGGATGGGCTCTCCACTGATCATCTGAAGAGCGAGAGCAAGAAGGCCGCCATTGACAG
ACCAAACACCGACCAAATTATCCAGCACAAACTCCCCGGAAGGAAGGAGATCGCCATTAGGCGGAATCTGTGGAGAGACGAGCAATCCTACGGCCGCCTGAAAAGTGAGA
CTCAAATTCCTCTCCCCGACGCTCCTGGAACGGTTCGCCCTTGGAATTGGATAGCTCTGGAATTCATTAACCACGTACAATGGAAGTGTGCGATGTTGCAGTGCGTCGAA
TCTCCTTCGATTGAGCGCCATTGCGTGAATAAATCTGATCGGGATAAAGCTTGTTTTATGACATTACGAAAGGAAAATGGAGGAGGATCTGGAGGAGGAGGAGGTGAATT
GGAAGCCATGGCTGTGATGTGCAATGAGGTTCCCTCATATTGTCCAGCAATGAAGAACGCTGGAGCTATCAATATGAGTCCAGAGACTTCTTTTCCCCAGCATTTTCACA
TCCTTGGTAAGGCATGTTCAAGATTGGACATTTCAACCAATCTGATGTACTGTATATTGTGCTGCTCCTTCAAAACAGTTACCCTCATTCTCTTGTTTCCTTATGAGCAA
GTGAATGGGAATCCTGTGCCTACTGTAATCTTCAAAGGCCTTCCGTCAACTTTCCATGCCTTTCTACTTTCAACTGTGATGGCATTCTCAGGCGCATTTAACGCCTTGAT
GCTTTCTGCTAATAAGCCAAAAATTGCCAGGTTTTGCAGCTACTACTCTATGGCATTTATGGCCTCAGCTGTAGTTTTATTGATTTGGGCTGTGTATCAGACGGTTTTTA
ACCGGAGACAATGGCAGGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGGCCTTAAAATGACAATAAATCTTCAATTGATTATATTTTTAATTTTGGATGGGCTCTCCACTGATCATCTGAAGAGCGAGAGCAAGAAGGCCGCCATTGACAG
ACCAAACACCGACCAAATTATCCAGCACAAACTCCCCGGAAGGAAGGAGATCGCCATTAGGCGGAATCTGTGGAGAGACGAGCAATCCTACGGCCGCCTGAAAAGTGAGA
CTCAAATTCCTCTCCCCGACGCTCCTGGAACGGTTCGCCCTTGGAATTGGATAGCTCTGGAATTCATTAACCACGTACAATGGAAGTGTGCGATGTTGCAGTGCGTCGAA
TCTCCTTCGATTGAGCGCCATTGCGTGAATAAATCTGATCGGGATAAAGCTTGTTTTATGACATTACGAAAGGAAAATGGAGGAGGATCTGGAGGAGGAGGAGGTGAATT
GGAAGCCATGGCTGTGATGTGCAATGAGGTTCCCTCATATTGTCCAGCAATGAAGAACGCTGGAGCTATCAATATGAGTCCAGAGACTTCTTTTCCCCAGCATTTTCACA
TCCTTGGTAAGGCATGTTCAAGATTGGACATTTCAACCAATCTGATGTACTGTATATTGTGCTGCTCCTTCAAAACAGTTACCCTCATTCTCTTGTTTCCTTATGAGCAA
GTGAATGGGAATCCTGTGCCTACTGTAATCTTCAAAGGCCTTCCGTCAACTTTCCATGCCTTTCTACTTTCAACTGTGATGGCATTCTCAGGCGCATTTAACGCCTTGAT
GCTTTCTGCTAATAAGCCAAAAATTGCCAGGTTTTGCAGCTACTACTCTATGGCATTTATGGCCTCAGCTGTAGTTTTATTGATTTGGGCTGTGTATCAGACGGTTTTTA
ACCGGAGACAATGGCAGGATTAA
Protein sequenceShow/hide protein sequence
MEGLKMTINLQLIIFLILDGLSTDHLKSESKKAAIDRPNTDQIIQHKLPGRKEIAIRRNLWRDEQSYGRLKSETQIPLPDAPGTVRPWNWIALEFINHVQWKCAMLQCVE
SPSIERHCVNKSDRDKACFMTLRKENGGGSGGGGGELEAMAVMCNEVPSYCPAMKNAGAINMSPETSFPQHFHILGKACSRLDISTNLMYCILCCSFKTVTLILLFPYEQ
VNGNPVPTVIFKGLPSTFHAFLLSTVMAFSGAFNALMLSANKPKIARFCSYYSMAFMASAVVLLIWAVYQTVFNRRQWQD