; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G016510 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G016510
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr04:8417360..8418726
RNA-Seq ExpressionCmoCh04G016510
SyntenyCmoCh04G016510
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034486.1 putative root meristem growth factor 8 [Cucumis melo var. makuwa]7.6e-3460.26Show/hide
Query:  MGLILMAMLCCVSLLILSVPFASSHALDQSSPLQATEAVHSPRLVLSRKFKMLEEA----KVVEAHGFQASKQEDEQKETVSGMQFQRKPKTIRSLVHRV
        MGLI+MA+LCCVS+LIL +P ASSHALDQSSPLQATEAVHSPRLVL RKFKML+EA    K VE  GFQ +KQ D  KE VSG                 
Subjt:  MGLILMAMLCCVSLLILSVPFASSHALDQSSPLQATEAVHSPRLVLSRKFKMLEEA----KVVEAHGFQASKQEDEQKETVSGMQFQRKPKTIRSLVHRV

Query:  VTSISGVMSQAYKREENKGKGRKWGNVADMSSRFFTMDYAHIKRRRPVHNMSRQRP
                 +    + NK KGRK  NVADMSS+ FTMDYAH+KRRRPVHNMS  RP
Subjt:  VTSISGVMSQAYKREENKGKGRKWGNVADMSSRFFTMDYAHIKRRRPVHNMSRQRP

KAG6601362.1 hypothetical protein SDJN03_06595, partial [Cucurbita argyrosperma subsp. sororia]2.3e-5180.69Show/hide
Query:  MLCCVSLLILSVPFASSHALDQSSPLQATEAVHSPRLVLSRKFKMLEEAKVVEAHGFQASKQEDEQKETVSGMQFQRKPKTIRSLVHRVVTSISGVMSQA
        MLCCVSLLILSVPFASSHALDQSSPLQATEAVHSPRLVLSRKFKMLEEAKVVEAH FQASKQEDEQKETVSG                          QA
Subjt:  MLCCVSLLILSVPFASSHALDQSSPLQATEAVHSPRLVLSRKFKMLEEAKVVEAHGFQASKQEDEQKETVSGMQFQRKPKTIRSLVHRVVTSISGVMSQA

Query:  YKREENKGKGRKWGNVADMSSRFFTMDYAHIKRRRPVHNMSRQRP
        YKREENKGKGRKWGN+ADMSSRFFTMDYAHIKRRRPVHNMSRQRP
Subjt:  YKREENKGKGRKWGNVADMSSRFFTMDYAHIKRRRPVHNMSRQRP

XP_022956442.1 uncharacterized protein LOC111458171 [Cucurbita moschata]1.2e-5582.89Show/hide
Query:  MGLILMAMLCCVSLLILSVPFASSHALDQSSPLQATEAVHSPRLVLSRKFKMLEEAKVVEAHGFQASKQEDEQKETVSGMQFQRKPKTIRSLVHRVVTSI
        MGLILMAMLCCVSLLILSVPFASSHALDQSSPLQATEAVHSPRLVLSRKFKMLEEAKVVEAHGFQASKQEDEQKETVSG                     
Subjt:  MGLILMAMLCCVSLLILSVPFASSHALDQSSPLQATEAVHSPRLVLSRKFKMLEEAKVVEAHGFQASKQEDEQKETVSGMQFQRKPKTIRSLVHRVVTSI

Query:  SGVMSQAYKREENKGKGRKWGNVADMSSRFFTMDYAHIKRRRPVHNMSRQRP
             QAYKREENKGKGRKWGNVADMSSRFFTMDYAHIKRRRPVHNMSRQRP
Subjt:  SGVMSQAYKREENKGKGRKWGNVADMSSRFFTMDYAHIKRRRPVHNMSRQRP

XP_022977309.1 uncharacterized protein LOC111477668 [Cucurbita maxima]9.5e-5379.61Show/hide
Query:  MGLILMAMLCCVSLLILSVPFASSHALDQSSPLQATEAVHSPRLVLSRKFKMLEEAKVVEAHGFQASKQEDEQKETVSGMQFQRKPKTIRSLVHRVVTSI
        MGLI MAMLCCVSLLILSVPFASSHALDQSSPLQ TEAVHSPRLVLSRKFKMLEEAKVVEAHGFQASKQEDEQKE VSG                     
Subjt:  MGLILMAMLCCVSLLILSVPFASSHALDQSSPLQATEAVHSPRLVLSRKFKMLEEAKVVEAHGFQASKQEDEQKETVSGMQFQRKPKTIRSLVHRVVTSI

Query:  SGVMSQAYKREENKGKGRKWGNVADMSSRFFTMDYAHIKRRRPVHNMSRQRP
             Q YKREENKGKGRKWGNVADMSSRF TMDYAHIKRRRPVHNMSRQRP
Subjt:  SGVMSQAYKREENKGKGRKWGNVADMSSRFFTMDYAHIKRRRPVHNMSRQRP

XP_023525366.1 uncharacterized protein LOC111788986 isoform X1 [Cucurbita pepo subsp. pepo]1.1e-5179.74Show/hide
Query:  MGLILMAMLCCVSLLILSVPFASSHALDQSSPLQATE-AVHSPRLVLSRKFKMLEEAKVVEAHGFQASKQEDEQKETVSGMQFQRKPKTIRSLVHRVVTS
        MGLILMAMLCCVSLLILSVPFASSHALDQSSPLQ TE AVHSPRLVLSRKFKMLEEAKVVEAHGFQASKQEDE KE VSG                    
Subjt:  MGLILMAMLCCVSLLILSVPFASSHALDQSSPLQATE-AVHSPRLVLSRKFKMLEEAKVVEAHGFQASKQEDEQKETVSGMQFQRKPKTIRSLVHRVVTS

Query:  ISGVMSQAYKREENKGKGRKWGNVADMSSRFFTMDYAHIKRRRPVHNMSRQRP
              QAYKREENKGKGRKWGNV DMSSRFFTMDYAHIKRRRPVHNMSRQRP
Subjt:  ISGVMSQAYKREENKGKGRKWGNVADMSSRFFTMDYAHIKRRRPVHNMSRQRP

TrEMBL top hitse value%identityAlignment
A0A0A0KWA1 Uncharacterized protein4.3e-3560.9Show/hide
Query:  MGLILMAMLCCVSLLILSVPFASSHALDQSSPLQATEAVHSPRLVLSRKFKMLEEA----KVVEAHGFQASKQEDEQKETVSGMQFQRKPKTIRSLVHRV
        MGLI+MA+LCCVS+L+L +P ASSHALDQSSPLQATE VHSP LVL RKFKMLEEA    K VEA GFQ +KQ+D  KE VSG + Q             
Subjt:  MGLILMAMLCCVSLLILSVPFASSHALDQSSPLQATEAVHSPRLVLSRKFKMLEEA----KVVEAHGFQASKQEDEQKETVSGMQFQRKPKTIRSLVHRV

Query:  VTSISGVMSQAYKREENKGKGRKWGNVADMSSRFFTMDYAHIKRRRPVHNMSRQRP
                      + NKGKGRKW  VADMSS+ FTMDYAH+KRRRPVHNMS +RP
Subjt:  VTSISGVMSQAYKREENKGKGRKWGNVADMSSRFFTMDYAHIKRRRPVHNMSRQRP

A0A5D3CCI7 Putative root meristem growth factor 83.7e-3460.26Show/hide
Query:  MGLILMAMLCCVSLLILSVPFASSHALDQSSPLQATEAVHSPRLVLSRKFKMLEEA----KVVEAHGFQASKQEDEQKETVSGMQFQRKPKTIRSLVHRV
        MGLI+MA+LCCVS+LIL +P ASSHALDQSSPLQATEAVHSPRLVL RKFKML+EA    K VE  GFQ +KQ D  KE VSG                 
Subjt:  MGLILMAMLCCVSLLILSVPFASSHALDQSSPLQATEAVHSPRLVLSRKFKMLEEA----KVVEAHGFQASKQEDEQKETVSGMQFQRKPKTIRSLVHRV

Query:  VTSISGVMSQAYKREENKGKGRKWGNVADMSSRFFTMDYAHIKRRRPVHNMSRQRP
                 +    + NK KGRK  NVADMSS+ FTMDYAH+KRRRPVHNMS  RP
Subjt:  VTSISGVMSQAYKREENKGKGRKWGNVADMSSRFFTMDYAHIKRRRPVHNMSRQRP

A0A6J1D6T9 uncharacterized protein LOC1110175711.5e-2752.63Show/hide
Query:  MGLILMAMLCCVSLLILSVPFASSHALDQSSPLQATEAVHSPRLVLSRKFKMLEEAKVVEAHGFQASKQEDEQKETVSGMQFQRKPKTIRSLVHRVVTSI
        MGLI+MA LCCVSLLIL +P+ASSHAL+QS  LQATEAV   R   +RKF+++EEA  V+AHG     Q D  ++ VSG  ++R+ K +           
Subjt:  MGLILMAMLCCVSLLILSVPFASSHALDQSSPLQATEAVHSPRLVLSRKFKMLEEAKVVEAHGFQASKQEDEQKETVSGMQFQRKPKTIRSLVHRVVTSI

Query:  SGVMSQAYKREENKGKGRKWGNVADMSSRFFTMDYAHIKRRRPVHNMSRQRP
                    ++ KGRKW +V DMSSRFFTMDY H +RRRPVHNMSRQRP
Subjt:  SGVMSQAYKREENKGKGRKWGNVADMSSRFFTMDYAHIKRRRPVHNMSRQRP

A0A6J1GWC1 uncharacterized protein LOC1114581715.8e-5682.89Show/hide
Query:  MGLILMAMLCCVSLLILSVPFASSHALDQSSPLQATEAVHSPRLVLSRKFKMLEEAKVVEAHGFQASKQEDEQKETVSGMQFQRKPKTIRSLVHRVVTSI
        MGLILMAMLCCVSLLILSVPFASSHALDQSSPLQATEAVHSPRLVLSRKFKMLEEAKVVEAHGFQASKQEDEQKETVSG                     
Subjt:  MGLILMAMLCCVSLLILSVPFASSHALDQSSPLQATEAVHSPRLVLSRKFKMLEEAKVVEAHGFQASKQEDEQKETVSGMQFQRKPKTIRSLVHRVVTSI

Query:  SGVMSQAYKREENKGKGRKWGNVADMSSRFFTMDYAHIKRRRPVHNMSRQRP
             QAYKREENKGKGRKWGNVADMSSRFFTMDYAHIKRRRPVHNMSRQRP
Subjt:  SGVMSQAYKREENKGKGRKWGNVADMSSRFFTMDYAHIKRRRPVHNMSRQRP

A0A6J1IR14 uncharacterized protein LOC1114776684.6e-5379.61Show/hide
Query:  MGLILMAMLCCVSLLILSVPFASSHALDQSSPLQATEAVHSPRLVLSRKFKMLEEAKVVEAHGFQASKQEDEQKETVSGMQFQRKPKTIRSLVHRVVTSI
        MGLI MAMLCCVSLLILSVPFASSHALDQSSPLQ TEAVHSPRLVLSRKFKMLEEAKVVEAHGFQASKQEDEQKE VSG                     
Subjt:  MGLILMAMLCCVSLLILSVPFASSHALDQSSPLQATEAVHSPRLVLSRKFKMLEEAKVVEAHGFQASKQEDEQKETVSGMQFQRKPKTIRSLVHRVVTSI

Query:  SGVMSQAYKREENKGKGRKWGNVADMSSRFFTMDYAHIKRRRPVHNMSRQRP
             Q YKREENKGKGRKWGNVADMSSRF TMDYAHIKRRRPVHNMSRQRP
Subjt:  SGVMSQAYKREENKGKGRKWGNVADMSSRFFTMDYAHIKRRRPVHNMSRQRP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTGATACTCATGGCCATGCTTTGCTGTGTTTCTCTATTGATTCTCTCGGTACCTTTTGCTTCCTCGCATGCTCTTGACCAGTCTTCTCCCTTGCAAGCAACTGA
AGCAGTGCATTCTCCTCGTCTCGTTTTGTCAAGGAAGTTCAAAATGTTGGAAGAAGCGAAGGTTGTTGAAGCTCACGGATTCCAAGCTTCCAAACAAGAAGATGAGCAGA
AGGAAACTGTTTCAGGTATGCAATTTCAAAGAAAGCCCAAAACCATTCGTTCGTTGGTTCATCGTGTTGTCACATCAATAAGCGGTGTAATGAGTCAGGCTTATAAAAGG
GAGGAAAACAAAGGGAAGGGGAGAAAGTGGGGGAATGTGGCCGACATGTCGTCGCGGTTTTTCACAATGGACTACGCTCACATAAAACGGCGCCGTCCCGTACATAACAT
GTCTCGCCAACGTCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTTGATACTCATGGCCATGCTTTGCTGTGTTTCTCTATTGATTCTCTCGGTACCTTTTGCTTCCTCGCATGCTCTTGACCAGTCTTCTCCCTTGCAAGCAACTGA
AGCAGTGCATTCTCCTCGTCTCGTTTTGTCAAGGAAGTTCAAAATGTTGGAAGAAGCGAAGGTTGTTGAAGCTCACGGATTCCAAGCTTCCAAACAAGAAGATGAGCAGA
AGGAAACTGTTTCAGGTATGCAATTTCAAAGAAAGCCCAAAACCATTCGTTCGTTGGTTCATCGTGTTGTCACATCAATAAGCGGTGTAATGAGTCAGGCTTATAAAAGG
GAGGAAAACAAAGGGAAGGGGAGAAAGTGGGGGAATGTGGCCGACATGTCGTCGCGGTTTTTCACAATGGACTACGCTCACATAAAACGGCGCCGTCCCGTACATAACAT
GTCTCGCCAACGTCCTTGAAGTTATCTCAATTTCTAATCTAACCCCTTCATTTCTTTTCCTTTTCCAATTTTAACCCATGAAAATGAAGGATTTGCATTCTTAGCCCATA
TGTTATGGCCGACAAAATGGCAGACTAGTTTAGAGGCTTA
Protein sequenceShow/hide protein sequence
MGLILMAMLCCVSLLILSVPFASSHALDQSSPLQATEAVHSPRLVLSRKFKMLEEAKVVEAHGFQASKQEDEQKETVSGMQFQRKPKTIRSLVHRVVTSISGVMSQAYKR
EENKGKGRKWGNVADMSSRFFTMDYAHIKRRRPVHNMSRQRP