; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G016540 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G016540
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptiontranscription factor PAR1-like
Genome locationCmo_Chr04:8428105..8428365
RNA-Seq ExpressionCmoCh04G016540
SyntenyCmoCh04G016540
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
InterPro domainsIPR044549 - Transcription factor IBH1-like, bHLH domain
IPR044660 - Transcription factor IBH1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601364.1 hypothetical protein SDJN03_06597, partial [Cucurbita argyrosperma subsp. sororia]9.2e-3792.05Show/hide
Query:  MEYYNCDETRGIAKVKWQRRGRRGGRHGG----ASVHMKLRKLQRIIPGGRRLKPDRLFLKTADYIMQLRSQVHVLNALSKIYDPQLS
        MEYYNCDETRGIAKVKWQRRGRRGGRHGG    +SVHMKLRKLQR+IPGGRRLKPDRLFLKTADYIMQLRSQVHVL ALSKIYDPQLS
Subjt:  MEYYNCDETRGIAKVKWQRRGRRGGRHGG----ASVHMKLRKLQRIIPGGRRLKPDRLFLKTADYIMQLRSQVHVLNALSKIYDPQLS
KAG7032147.1 hypothetical protein SDJN02_06190, partial [Cucurbita argyrosperma subsp. argyrosperma]9.2e-3792.05Show/hide
Query:  MEYYNCDETRGIAKVKWQRRGRRGGRHGG----ASVHMKLRKLQRIIPGGRRLKPDRLFLKTADYIMQLRSQVHVLNALSKIYDPQLS
        MEYYNCDETRGIAKVKWQRRGRRGGRHGG    +SVHMKLRKLQR+IPGGRRLKPDRLFLKTADYIMQLRSQVHVL ALSKIYDPQLS
Subjt:  MEYYNCDETRGIAKVKWQRRGRRGGRHGG----ASVHMKLRKLQRIIPGGRRLKPDRLFLKTADYIMQLRSQVHVLNALSKIYDPQLS
XP_022957171.1 transcription factor PAR2-like [Cucurbita moschata]4.7e-41100Show/hide
Query:  MEYYNCDETRGIAKVKWQRRGRRGGRHGGASVHMKLRKLQRIIPGGRRLKPDRLFLKTADYIMQLRSQVHVLNALSKIYDPQLSRY
        MEYYNCDETRGIAKVKWQRRGRRGGRHGGASVHMKLRKLQRIIPGGRRLKPDRLFLKTADYIMQLRSQVHVLNALSKIYDPQLSRY
Subjt:  MEYYNCDETRGIAKVKWQRRGRRGGRHGGASVHMKLRKLQRIIPGGRRLKPDRLFLKTADYIMQLRSQVHVLNALSKIYDPQLSRY
XP_022977324.1 uncharacterized protein LOC111477674 [Cucurbita maxima]1.7e-3588.51Show/hide
Query:  MEYYNCDETRGIAKVKWQRRGRRGGRHGG-ASVHMKLRKLQRIIPGGRRLKPDRLFLKTADYIMQLRSQVHVLNALSKIYDPQLSRY
        MEYYNCDE +GIAKVKWQRRGRRGG HGG +SVHMK+RKLQR+IPGGRRLKPDRLFLKTADYIMQLRSQVHVL ALSKIYDP+LS+Y
Subjt:  MEYYNCDETRGIAKVKWQRRGRRGGRHGG-ASVHMKLRKLQRIIPGGRRLKPDRLFLKTADYIMQLRSQVHVLNALSKIYDPQLSRY
XP_023513052.1 transcription factor PAR2-like [Cucurbita pepo subsp. pepo]7.1e-3793.1Show/hide
Query:  MEYYNCDETRGIAKVKWQRRGRRGGRH---GGASVHMKLRKLQRIIPGGRRLKPDRLFLKTADYIMQLRSQVHVLNALSKIYDPQLS
        MEYYNCDETRGIAKVKWQRRGRRGGRH   GG+SVHMKLRKLQR+IPGGRRLKPDRLFLKTADYIMQLRSQVHVL ALSKIYDPQLS
Subjt:  MEYYNCDETRGIAKVKWQRRGRRGGRH---GGASVHMKLRKLQRIIPGGRRLKPDRLFLKTADYIMQLRSQVHVLNALSKIYDPQLS
TrEMBL top hitse value%identityAlignment
A0A0A0KQB4 Uncharacterized protein1.6e-3180.68Show/hide
Query:  EYYNCDETRGIAKVKWQRRGRRGGRH---GGASVHMKLRKLQRIIPGGRRLKPDRLFLKTADYIMQLRSQVHVLNALSKIYDPQLSRY
        +YY+  E++GI KV+WQRRGRRGGRH   GG SVHMK+RKLQR+IPGGRRLKPDRLFLKTADYIMQLRSQVHVL ALSKIYDP LS Y
Subjt:  EYYNCDETRGIAKVKWQRRGRRGGRH---GGASVHMKLRKLQRIIPGGRRLKPDRLFLKTADYIMQLRSQVHVLNALSKIYDPQLSRY
A0A1S3BFE3 uncharacterized protein LOC1034890265.3e-3080.46Show/hide
Query:  YYNCDETRGIAKVKWQRRGRRGGRH-----GGASVHMKLRKLQRIIPGGRRLKPDRLFLKTADYIMQLRSQVHVLNALSKIYDPQLS
        YY+  E+ GI KV+WQRRGRRGGRH     GG SVHMK+RKLQR+IPGGRRLKPDRLFLKTADYIMQLRSQVHVL ALSKIYDP LS
Subjt:  YYNCDETRGIAKVKWQRRGRRGGRH-----GGASVHMKLRKLQRIIPGGRRLKPDRLFLKTADYIMQLRSQVHVLNALSKIYDPQLS
A0A6J1DDZ5 transcription factor PAR28.4e-2876.92Show/hide
Query:  MEYYNCDETR----GIAKVKWQRRGRRGGRHGGASVHMKLRKLQRIIPGGRRLKPDRLFLKTADYIMQLRSQVHVLNALSKIYDPQL-SRY
        MEYY    T     GI KVKWQRRGRRGGRHGG SV MK+RKLQR+IPGGR LKPDRLFLKTADYIMQLRSQV+VL ALSKIY+P L S+Y
Subjt:  MEYYNCDETR----GIAKVKWQRRGRRGGRHGGASVHMKLRKLQRIIPGGRRLKPDRLFLKTADYIMQLRSQVHVLNALSKIYDPQL-SRY
A0A6J1GYH6 transcription factor PAR2-like2.3e-41100Show/hide
Query:  MEYYNCDETRGIAKVKWQRRGRRGGRHGGASVHMKLRKLQRIIPGGRRLKPDRLFLKTADYIMQLRSQVHVLNALSKIYDPQLSRY
        MEYYNCDETRGIAKVKWQRRGRRGGRHGGASVHMKLRKLQRIIPGGRRLKPDRLFLKTADYIMQLRSQVHVLNALSKIYDPQLSRY
Subjt:  MEYYNCDETRGIAKVKWQRRGRRGGRHGGASVHMKLRKLQRIIPGGRRLKPDRLFLKTADYIMQLRSQVHVLNALSKIYDPQLSRY
A0A6J1IR24 uncharacterized protein LOC1114776748.4e-3688.51Show/hide
Query:  MEYYNCDETRGIAKVKWQRRGRRGGRHGG-ASVHMKLRKLQRIIPGGRRLKPDRLFLKTADYIMQLRSQVHVLNALSKIYDPQLSRY
        MEYYNCDE +GIAKVKWQRRGRRGG HGG +SVHMK+RKLQR+IPGGRRLKPDRLFLKTADYIMQLRSQVHVL ALSKIYDP+LS+Y
Subjt:  MEYYNCDETRGIAKVKWQRRGRRGGRHGG-ASVHMKLRKLQRIIPGGRRLKPDRLFLKTADYIMQLRSQVHVLNALSKIYDPQLSRY
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G23965.1 unknown protein6.0e-1044.59Show/hide
Query:  DETRGIAKVKWQRRGRRGGRHGGASVHMKLRKLQRIIPGGRRL-KPDRLFLKTADYIMQLRSQVHVLNALSKIY
        +E+R   + + Q + + G   G  S+ +K+RKL+ +IPGGRRL +PD L  KTADYIM L  ++  L A+S IY
Subjt:  DETRGIAKVKWQRRGRRGGRHGGASVHMKLRKLQRIIPGGRRL-KPDRLFLKTADYIMQLRSQVHVLNALSKIY
AT1G70270.1 unknown protein2.6e-0536.99Show/hide
Query:  ETRGIAKVKWQRRGRRGGRHGGASVHMKLRKLQRIIPGGRRLK-PDRLFLKTADYIMQLRSQVHVLNALSKIY
        +T    K    ++G   G   G  + MK+R+LQ +IPGG+    PD L  KT DYI+ L+ ++  L A+S++Y
Subjt:  ETRGIAKVKWQRRGRRGGRHGGASVHMKLRKLQRIIPGGRRLK-PDRLFLKTADYIMQLRSQVHVLNALSKIY
AT3G29370.1 unknown protein6.4e-0441.94Show/hide
Query:  GGRHGGASVHMKLRKLQRIIP-----GGRRLKPDRLFLKTADYIMQLRSQVHVLNALSKIYD
        G   GG +V  KL  L+ ++P     GG   + + LF +TA+YI++LR+QV VL  L +IYD
Subjt:  GGRHGGASVHMKLRKLQRIIP-----GGRRLKPDRLFLKTADYIMQLRSQVHVLNALSKIYD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATATTACAATTGTGATGAGACCAGAGGGATTGCGAAGGTGAAGTGGCAGAGGAGAGGGAGGCGCGGCGGACGGCACGGCGGCGCCTCCGTTCACATGAAGTTGAG
AAAGCTGCAGCGAATCATCCCCGGAGGACGGAGGCTGAAACCGGACCGGCTATTCTTAAAAACGGCGGATTATATTATGCAATTGAGGTCTCAAGTTCATGTTTTGAACG
CGCTTTCCAAGATCTACGACCCCCAACTTTCTCGATATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAATATTACAATTGTGATGAGACCAGAGGGATTGCGAAGGTGAAGTGGCAGAGGAGAGGGAGGCGCGGCGGACGGCACGGCGGCGCCTCCGTTCACATGAAGTTGAG
AAAGCTGCAGCGAATCATCCCCGGAGGACGGAGGCTGAAACCGGACCGGCTATTCTTAAAAACGGCGGATTATATTATGCAATTGAGGTCTCAAGTTCATGTTTTGAACG
CGCTTTCCAAGATCTACGACCCCCAACTTTCTCGATATTGA
Protein sequenceShow/hide protein sequence
MEYYNCDETRGIAKVKWQRRGRRGGRHGGASVHMKLRKLQRIIPGGRRLKPDRLFLKTADYIMQLRSQVHVLNALSKIYDPQLSRY