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CmoCh04G016640 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G016640
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionprotein PLASTID REDOX INSENSITIVE 2, chloroplastic-like
Genome locationCmo_Chr04:8463855..8464890
RNA-Seq ExpressionCmoCh04G016640
SyntenyCmoCh04G016640
Gene Ontology termsGO:0010468 - regulation of gene expression (biological process)
InterPro domainsIPR039349 - Protein PLASTID REDOX INSENSITIVE 2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601371.1 Protein PLASTID REDOX INSENSITIVE 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]4.2e-8997.7Show/hide
Query:  MASYSCVLVSAIAVSPAKTTCFNGLNYPTFFP-SSSSLVNPFVNCTLTSSIIYRATPAPATATCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDL
        MASYSCVLVSAIAVSPAKTTCFNGLNYPTF P SSSSLVNPFVNCTLTSSIIYRATPAP  ATCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDL
Subjt:  MASYSCVLVSAIAVSPAKTTCFNGLNYPTFFP-SSSSLVNPFVNCTLTSSIIYRATPAPATATCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDL

Query:  DSVVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK
        DSVVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK
Subjt:  DSVVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK

XP_022956735.1 protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like isoform X1 [Cucurbita moschata]7.4e-94100Show/hide
Query:  MASYSCVLVSAIAVSPAKTTCFNGLNYPTFFPSSSSLVNPFVNCTLTSSIIYRATPAPATATCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLD
        MASYSCVLVSAIAVSPAKTTCFNGLNYPTFFPSSSSLVNPFVNCTLTSSIIYRATPAPATATCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLD
Subjt:  MASYSCVLVSAIAVSPAKTTCFNGLNYPTFFPSSSSLVNPFVNCTLTSSIIYRATPAPATATCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLD

Query:  SVVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK
        SVVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK
Subjt:  SVVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK

XP_022988602.1 protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like isoform X1 [Cucurbita maxima]1.4e-8494.22Show/hide
Query:  MASYSCVLVSAIAVSPAKTTCFNGLNYPTFFPSSSSLVNPFVNCTLTSSIIYRATPAPATATCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLD
        MASYSCVLVSAIAVSPAKTTCFNGLNYPTF P SSSL  PFVNCTLTSSIIYRAT  PATA+CVY DPIPEFAEVET+KFKEQLSKKLAKDRETFGNDLD
Subjt:  MASYSCVLVSAIAVSPAKTTCFNGLNYPTFFPSSSSLVNPFVNCTLTSSIIYRATPAPATATCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLD

Query:  SVVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK
        SVVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLA RTSLLWAQNYLDHDWNIWISKRGLK
Subjt:  SVVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK

XP_023513712.1 protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo]6.3e-8593.82Show/hide
Query:  MASYSCVLVSAIAVSPAKTTCFNGLNYPTFFP--SSSSLVNPFVNCTLTSSIIYRATPAPATATCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGND
        MASYSCVLVSAIAVSPAKTTCFNGLNYPTF P  SSSSLV PFVNCTLTSSIIYRAT  PATA+CVY DPIPEFAEVETKKFKEQLSKKLAKDRETFGND
Subjt:  MASYSCVLVSAIAVSPAKTTCFNGLNYPTFFP--SSSSLVNPFVNCTLTSSIIYRATPAPATATCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGND

Query:  LDSVVEVCSK---IFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK
        LDSVVEVCSK   IFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK
Subjt:  LDSVVEVCSK---IFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK

XP_023513727.1 protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like isoform X2 [Cucurbita pepo subsp. pepo]1.5e-8695.43Show/hide
Query:  MASYSCVLVSAIAVSPAKTTCFNGLNYPTFFP--SSSSLVNPFVNCTLTSSIIYRATPAPATATCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGND
        MASYSCVLVSAIAVSPAKTTCFNGLNYPTF P  SSSSLV PFVNCTLTSSIIYRAT  PATA+CVY DPIPEFAEVETKKFKEQLSKKLAKDRETFGND
Subjt:  MASYSCVLVSAIAVSPAKTTCFNGLNYPTFFP--SSSSLVNPFVNCTLTSSIIYRATPAPATATCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGND

Query:  LDSVVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK
        LDSVVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK
Subjt:  LDSVVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK

TrEMBL top hitse value%identityAlignment
A0A1S3BEK8 uncharacterized protein LOC103489034 isoform X16.0e-7382.29Show/hide
Query:  MASYSCVLVSAIAVSPAKTTCFNGLNYPTF--FPSSSSLVNPFVNCTLTSSIIYRATPAPATATCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGND
        MA Y C LVSAI VSPAK T FNGL+YPTF  FP   S V P VNCTLTSS+IYRAT  P TA+ VYP+PIPEFAEVET+KFKEQLSKKLAKDRETFGND
Subjt:  MASYSCVLVSAIAVSPAKTTCFNGLNYPTF--FPSSSSLVNPFVNCTLTSSIIYRATPAPATATCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGND

Query:  LDSVVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK
         DSVV+VCSKIF EYLHVEYGGPGTL+VEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLD+DWNIW SK G K
Subjt:  LDSVVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK

A0A5A7SZ04 Uncharacterized protein6.0e-7382.29Show/hide
Query:  MASYSCVLVSAIAVSPAKTTCFNGLNYPTF--FPSSSSLVNPFVNCTLTSSIIYRATPAPATATCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGND
        MA Y C LVSAI VSPAK T FNGL+YPTF  FP   S V P VNCTLTSS+IYRAT  P TA+ VYP+PIPEFAEVET+KFKEQLSKKLAKDRETFGND
Subjt:  MASYSCVLVSAIAVSPAKTTCFNGLNYPTF--FPSSSSLVNPFVNCTLTSSIIYRATPAPATATCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGND

Query:  LDSVVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK
         DSVV+VCSKIF EYLHVEYGGPGTL+VEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLD+DWNIW SK G K
Subjt:  LDSVVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK

A0A6J1DB25 protein PLASTID REDOX INSENSITIVE 2-like1.1e-6376.92Show/hide
Query:  MASYSCVLVSAIAVSPAKTTCFNGLNYPTFFPSSSSLVNPFVNCTLTSSIIYRATPAPATATCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLD
        MA + C L+ A AV PAK TCFNGL +PTF P   SLV PFVNCT TSS  YRATP P     VYPDPIPEFAE ET+KF+E LSKKLA+DR TFGNDLD
Subjt:  MASYSCVLVSAIAVSPAKTTCFNGLNYPTFFPSSSSLVNPFVNCTLTSSIIYRATPAPATATCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLD

Query:  SVVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISK
         VVEVCSKIF EYLHVEYGGP TLLVEPFTNMFIALNERKLPGA LAARTSLLWAQN+LD DW IW SK
Subjt:  SVVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISK

A0A6J1GYK9 protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like isoform X13.6e-94100Show/hide
Query:  MASYSCVLVSAIAVSPAKTTCFNGLNYPTFFPSSSSLVNPFVNCTLTSSIIYRATPAPATATCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLD
        MASYSCVLVSAIAVSPAKTTCFNGLNYPTFFPSSSSLVNPFVNCTLTSSIIYRATPAPATATCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLD
Subjt:  MASYSCVLVSAIAVSPAKTTCFNGLNYPTFFPSSSSLVNPFVNCTLTSSIIYRATPAPATATCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLD

Query:  SVVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK
        SVVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK
Subjt:  SVVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK

A0A6J1JDH3 protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like isoform X16.8e-8594.22Show/hide
Query:  MASYSCVLVSAIAVSPAKTTCFNGLNYPTFFPSSSSLVNPFVNCTLTSSIIYRATPAPATATCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLD
        MASYSCVLVSAIAVSPAKTTCFNGLNYPTF P SSSL  PFVNCTLTSSIIYRAT  PATA+CVY DPIPEFAEVET+KFKEQLSKKLAKDRETFGNDLD
Subjt:  MASYSCVLVSAIAVSPAKTTCFNGLNYPTFFPSSSSLVNPFVNCTLTSSIIYRATPAPATATCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLD

Query:  SVVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK
        SVVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLA RTSLLWAQNYLDHDWNIWISKRGLK
Subjt:  SVVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK

SwissProt top hitse value%identityAlignment
B6UFC7 Protein PLASTID REDOX INSENSITIVE 2, chloroplastic2.9e-2448.54Show/hide
Query:  YPDPIPEFAEVETKKFKEQLSKKLAKDRET-FGNDLDSVVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDW
        +PDPIPEFAE ET KF+E ++ +L + +E  FG+ ++ +V+VC++I   +L  +Y GPGTLLV PF +M   + ER LPGAP AAR ++ WA+  +D DW
Subjt:  YPDPIPEFAEVETKKFKEQLSKKLAKDRET-FGNDLDSVVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDW

Query:  NIW
          W
Subjt:  NIW

Q6H612 Protein PLASTID REDOX INSENSITIVE 2, chloroplastic7.1e-2339.18Show/hide
Query:  AIAVSPAKTTCFNGLNYPTFFPSSSSLVNPFVNCTLTSSIIYR---ATPAPATATC-----------VYPDPIPEFAEVETKKFKEQLSKKLAKDRET-F
        A AV+PA       LN P    S+SS  +   +  L  S++ R     P PA   C            +PDPIPEFA  ET KFKE +  +L + ++  F
Subjt:  AIAVSPAKTTCFNGLNYPTFFPSSSSLVNPFVNCTLTSSIIYR---ATPAPATATC-----------VYPDPIPEFAEVETKKFKEQLSKKLAKDRET-F

Query:  GNDLDSVVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIW
        G  ++ +V+VC++I   +L  +Y GPGTLLV PF +M   + ER LPGAP AAR ++ WA+  +D DW  W
Subjt:  GNDLDSVVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIW

Q9XIK0 Protein PLASTID REDOX INSENSITIVE 2, chloroplastic4.3e-2854.9Show/hide
Query:  YPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLDSVVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWN
        +PDPIPEFAE ET+KF++ +  KL+K R+ F + +D +V VC++IF  +L  EYGGPGTLLV PF +M   LNER+LPG P AAR ++ WAQ+++D DW 
Subjt:  YPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLDSVVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWN

Query:  IW
         W
Subjt:  IW

Arabidopsis top hitse value%identityAlignment
AT1G10522.1 unknown protein3.1e-2954.9Show/hide
Query:  YPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLDSVVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWN
        +PDPIPEFAE ET+KF++ +  KL+K R+ F + +D +V VC++IF  +L  EYGGPGTLLV PF +M   LNER+LPG P AAR ++ WAQ+++D DW 
Subjt:  YPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLDSVVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWN

Query:  IW
         W
Subjt:  IW

AT1G10522.2 unknown protein3.1e-2954.9Show/hide
Query:  YPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLDSVVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWN
        +PDPIPEFAE ET+KF++ +  KL+K R+ F + +D +V VC++IF  +L  EYGGPGTLLV PF +M   LNER+LPG P AAR ++ WAQ+++D DW 
Subjt:  YPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLDSVVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWN

Query:  IW
         W
Subjt:  IW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCCTACAGTTGCGTTCTGGTTTCAGCCATTGCAGTTTCTCCCGCCAAGACTACATGCTTCAACGGACTTAATTATCCAACATTTTTCCCTTCTTCTTCTTCCCT
TGTAAACCCCTTTGTTAATTGTACCTTAACTTCTTCCATCATATACAGAGCAACTCCGGCCCCGGCCACGGCCACCTGCGTTTACCCTGATCCGATACCGGAGTTTGCAG
AAGTTGAAACCAAGAAATTTAAGGAGCAGTTATCGAAGAAGCTAGCGAAGGATCGCGAGACGTTTGGGAACGACCTCGATTCGGTTGTGGAGGTTTGCTCAAAGATATTT
AGTGAATATTTGCATGTGGAGTACGGAGGTCCTGGGACATTATTAGTGGAGCCTTTCACTAATATGTTTATTGCTCTAAACGAGAGGAAATTACCTGGAGCGCCTTTGGC
TGCAAGAACTTCGCTTCTATGGGCTCAAAACTATCTAGATCACGATTGGAACATTTGGATCTCAAAACGAGGGCTCAAATGA
mRNA sequenceShow/hide mRNA sequence
TGGGATAACCCCATCCAATGGCGTCCTACAGTTGCGTTCTGGTTTCAGCCATTGCAGTTTCTCCCGCCAAGACTACATGCTTCAACGGACTTAATTATCCAACATTTTTC
CCTTCTTCTTCTTCCCTTGTAAACCCCTTTGTTAATTGTACCTTAACTTCTTCCATCATATACAGAGCAACTCCGGCCCCGGCCACGGCCACCTGCGTTTACCCTGATCC
GATACCGGAGTTTGCAGAAGTTGAAACCAAGAAATTTAAGGAGCAGTTATCGAAGAAGCTAGCGAAGGATCGCGAGACGTTTGGGAACGACCTCGATTCGGTTGTGGAGG
TTTGCTCAAAGATATTTAGTGAATATTTGCATGTGGAGTACGGAGGTCCTGGGACATTATTAGTGGAGCCTTTCACTAATATGTTTATTGCTCTAAACGAGAGGAAATTA
CCTGGAGCGCCTTTGGCTGCAAGAACTTCGCTTCTATGGGCTCAAAACTATCTAGATCACGATTGGAACATTTGGATCTCAAAACGAGGGCTCAAATGA
Protein sequenceShow/hide protein sequence
MASYSCVLVSAIAVSPAKTTCFNGLNYPTFFPSSSSLVNPFVNCTLTSSIIYRATPAPATATCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLDSVVEVCSKIF
SEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK