CuGenDBv2

Gene ID	CmoCh04G016730
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Zinc finger, MYND-type
Genome location	Cmo_Chr04:8490280..8492060
RNA-Seq Expression	CmoCh04G016730
Synteny	CmoCh04G016730
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6601382.1 hypothetical protein SDJN03_06615, partial [Cucurbita argyrosperma subsp. sororia]

1.2e-93

99.4

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Query:  VISVMSMWTRLQPAYAANMWNEALNKRLGTEDLDLHDILVETEKRGIPFDVLLTIPEQDEWVYSDGKSTTCVAFILAMYKEAGIFGPVSSSIQVTEFTIR
        VISVMSMWTRLQPAYAANMWNEALNKRLGTEDLDLHDILVETEKRGIPFDVLLTIPEQDEW+YSDGKSTTCVAFILAMYKEAGIFGPVSSSIQVTEFTIR
Subjt:  VISVMSMWTRLQPAYAANMWNEALNKRLGTEDLDLHDILVETEKRGIPFDVLLTIPEQDEWVYSDGKSTTCVAFILAMYKEAGIFGPVSSSIQVTEFTIR

Query:  DAYMLRIFEDNHTRLPTWCNNESDKLPFCQILGEYKMELPQYNTLEPYANMNENCPSLPPTYDRPIR
        DAYMLRIFEDNHTRLPTWCNNESDKLPFCQILGEYKMELPQYNTLEPYANMNENCPSLPPTYDRPIR
Subjt:  DAYMLRIFEDNHTRLPTWCNNESDKLPFCQILGEYKMELPQYNTLEPYANMNENCPSLPPTYDRPIR

KAG7032162.1 hypothetical protein SDJN02_06205, partial [Cucurbita argyrosperma subsp. argyrosperma]

9.5e-94

100

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Query:  VISVMSMWTRLQPAYAANMWNEALNKRLGTEDLDLHDILVETEKRGIPFDVLLTIPEQDEWVYSDGKSTTCVAFILAMYKEAGIFGPVSSSIQVTEFTIR
        VISVMSMWTRLQPAYAANMWNEALNKRLGTEDLDLHDILVETEKRGIPFDVLLTIPEQDEWVYSDGKSTTCVAFILAMYKEAGIFGPVSSSIQVTEFTIR
Subjt:  VISVMSMWTRLQPAYAANMWNEALNKRLGTEDLDLHDILVETEKRGIPFDVLLTIPEQDEWVYSDGKSTTCVAFILAMYKEAGIFGPVSSSIQVTEFTIR

Query:  DAYMLRIFEDNHTRLPTWCNNESDKLPFCQILGEYKMELPQYNTLEPYANMNENCPSLPPTYDRPIR
        DAYMLRIFEDNHTRLPTWCNNESDKLPFCQILGEYKMELPQYNTLEPYANMNENCPSLPPTYDRPIR
Subjt:  DAYMLRIFEDNHTRLPTWCNNESDKLPFCQILGEYKMELPQYNTLEPYANMNENCPSLPPTYDRPIR

XP_022956593.1 uncharacterized protein LOC111458283 [Cucurbita moschata]

9.5e-94

100

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Query:  VISVMSMWTRLQPAYAANMWNEALNKRLGTEDLDLHDILVETEKRGIPFDVLLTIPEQDEWVYSDGKSTTCVAFILAMYKEAGIFGPVSSSIQVTEFTIR
        VISVMSMWTRLQPAYAANMWNEALNKRLGTEDLDLHDILVETEKRGIPFDVLLTIPEQDEWVYSDGKSTTCVAFILAMYKEAGIFGPVSSSIQVTEFTIR
Subjt:  VISVMSMWTRLQPAYAANMWNEALNKRLGTEDLDLHDILVETEKRGIPFDVLLTIPEQDEWVYSDGKSTTCVAFILAMYKEAGIFGPVSSSIQVTEFTIR

Query:  DAYMLRIFEDNHTRLPTWCNNESDKLPFCQILGEYKMELPQYNTLEPYANMNENCPSLPPTYDRPIR
        DAYMLRIFEDNHTRLPTWCNNESDKLPFCQILGEYKMELPQYNTLEPYANMNENCPSLPPTYDRPIR
Subjt:  DAYMLRIFEDNHTRLPTWCNNESDKLPFCQILGEYKMELPQYNTLEPYANMNENCPSLPPTYDRPIR

XP_022997471.1 uncharacterized protein LOC111492349 [Cucurbita maxima]

2.1e-93

99.4

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Query:  VISVMSMWTRLQPAYAANMWNEALNKRLGTEDLDLHDILVETEKRGIPFDVLLTIPEQDEWVYSDGKSTTCVAFILAMYKEAGIFGPVSSSIQVTEFTIR
        VISVMSMWTRLQPAYAANMWNEALNKRLGTEDLDLHDILVETEKRGIPFD+LLTIPEQDEWVYSDGKSTTCVAFILAMYKEAGIFGPVSSSIQVTEFTIR
Subjt:  VISVMSMWTRLQPAYAANMWNEALNKRLGTEDLDLHDILVETEKRGIPFDVLLTIPEQDEWVYSDGKSTTCVAFILAMYKEAGIFGPVSSSIQVTEFTIR

Query:  DAYMLRIFEDNHTRLPTWCNNESDKLPFCQILGEYKMELPQYNTLEPYANMNENCPSLPPTYDRPIR
        DAYMLRIFEDNHTRLPTWCNNESDKLPFCQILGEYKMELPQYNTLEPYANMNENCPSLPPTYDRPIR
Subjt:  DAYMLRIFEDNHTRLPTWCNNESDKLPFCQILGEYKMELPQYNTLEPYANMNENCPSLPPTYDRPIR

XP_023549699.1 uncharacterized protein LOC111808117 [Cucurbita pepo subsp. pepo]

9.5e-94

100

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Query:  VISVMSMWTRLQPAYAANMWNEALNKRLGTEDLDLHDILVETEKRGIPFDVLLTIPEQDEWVYSDGKSTTCVAFILAMYKEAGIFGPVSSSIQVTEFTIR
        VISVMSMWTRLQPAYAANMWNEALNKRLGTEDLDLHDILVETEKRGIPFDVLLTIPEQDEWVYSDGKSTTCVAFILAMYKEAGIFGPVSSSIQVTEFTIR
Subjt:  VISVMSMWTRLQPAYAANMWNEALNKRLGTEDLDLHDILVETEKRGIPFDVLLTIPEQDEWVYSDGKSTTCVAFILAMYKEAGIFGPVSSSIQVTEFTIR

Query:  DAYMLRIFEDNHTRLPTWCNNESDKLPFCQILGEYKMELPQYNTLEPYANMNENCPSLPPTYDRPIR
        DAYMLRIFEDNHTRLPTWCNNESDKLPFCQILGEYKMELPQYNTLEPYANMNENCPSLPPTYDRPIR
Subjt:  DAYMLRIFEDNHTRLPTWCNNESDKLPFCQILGEYKMELPQYNTLEPYANMNENCPSLPPTYDRPIR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KTT2 Uncharacterized protein

3.6e-91

97.58

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Query:  VISVMSMWTRLQPAYAANMWNEALNKRLGTEDLDLHDILVETEKRGIPFDVLLTIPEQDEWVYSDGKSTTCVAFILAMYKEAGIFGPVSSSIQVTEFTIR
        VISVMSMWTRLQPAYAANMWNEALNKRLGTEDLDLHDILVETEKRGIPFD LLTIPEQD+WVYSDGKSTTCVAFILAMYKEAGIFGPVSSSIQVTEFTIR
Subjt:  VISVMSMWTRLQPAYAANMWNEALNKRLGTEDLDLHDILVETEKRGIPFDVLLTIPEQDEWVYSDGKSTTCVAFILAMYKEAGIFGPVSSSIQVTEFTIR

Query:  DAYMLRIFEDNHTRLPTWCNNESDKLPFCQILGEYKMELPQYNTLEPYANMNENCPSLPPTYDRP
        DAYML+IFEDNHTRLPTWCNNESDKLPFCQILGEYKMELPQ+NTLEPYANMNENCPSLPPTYDRP
Subjt:  DAYMLRIFEDNHTRLPTWCNNESDKLPFCQILGEYKMELPQYNTLEPYANMNENCPSLPPTYDRP

A0A1S3BFB0 uncharacterized protein LOC103489044

5.6e-92

98.79

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Query:  VISVMSMWTRLQPAYAANMWNEALNKRLGTEDLDLHDILVETEKRGIPFDVLLTIPEQDEWVYSDGKSTTCVAFILAMYKEAGIFGPVSSSIQVTEFTIR
        VISVMSMWTRLQPAYAANMWNEALNKRLGTEDLDLHDILVETEKRGIPFD LLTIPEQDEWVYSDGKSTTCVAFILAMYKEAGIFGPVSSSIQVTEFTIR
Subjt:  VISVMSMWTRLQPAYAANMWNEALNKRLGTEDLDLHDILVETEKRGIPFDVLLTIPEQDEWVYSDGKSTTCVAFILAMYKEAGIFGPVSSSIQVTEFTIR

Query:  DAYMLRIFEDNHTRLPTWCNNESDKLPFCQILGEYKMELPQYNTLEPYANMNENCPSLPPTYDRP
        DAYML+IFEDNHTRLPTWCNNESDKLPFCQILGEYKMELPQYNTLEPYANMNENCPSLPPTYDRP
Subjt:  DAYMLRIFEDNHTRLPTWCNNESDKLPFCQILGEYKMELPQYNTLEPYANMNENCPSLPPTYDRP

A0A5A7SYR5 Zinc finger, MYND-type

5.6e-92

98.79

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Query:  VISVMSMWTRLQPAYAANMWNEALNKRLGTEDLDLHDILVETEKRGIPFDVLLTIPEQDEWVYSDGKSTTCVAFILAMYKEAGIFGPVSSSIQVTEFTIR
        VISVMSMWTRLQPAYAANMWNEALNKRLGTEDLDLHDILVETEKRGIPFD LLTIPEQDEWVYSDGKSTTCVAFILAMYKEAGIFGPVSSSIQVTEFTIR
Subjt:  VISVMSMWTRLQPAYAANMWNEALNKRLGTEDLDLHDILVETEKRGIPFDVLLTIPEQDEWVYSDGKSTTCVAFILAMYKEAGIFGPVSSSIQVTEFTIR

Query:  DAYMLRIFEDNHTRLPTWCNNESDKLPFCQILGEYKMELPQYNTLEPYANMNENCPSLPPTYDRP
        DAYML+IFEDNHTRLPTWCNNESDKLPFCQILGEYKMELPQYNTLEPYANMNENCPSLPPTYDRP
Subjt:  DAYMLRIFEDNHTRLPTWCNNESDKLPFCQILGEYKMELPQYNTLEPYANMNENCPSLPPTYDRP

A0A6J1GXC5 uncharacterized protein LOC111458283

4.6e-94

100

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Query:  VISVMSMWTRLQPAYAANMWNEALNKRLGTEDLDLHDILVETEKRGIPFDVLLTIPEQDEWVYSDGKSTTCVAFILAMYKEAGIFGPVSSSIQVTEFTIR
        VISVMSMWTRLQPAYAANMWNEALNKRLGTEDLDLHDILVETEKRGIPFDVLLTIPEQDEWVYSDGKSTTCVAFILAMYKEAGIFGPVSSSIQVTEFTIR
Subjt:  VISVMSMWTRLQPAYAANMWNEALNKRLGTEDLDLHDILVETEKRGIPFDVLLTIPEQDEWVYSDGKSTTCVAFILAMYKEAGIFGPVSSSIQVTEFTIR

Query:  DAYMLRIFEDNHTRLPTWCNNESDKLPFCQILGEYKMELPQYNTLEPYANMNENCPSLPPTYDRPIR
        DAYMLRIFEDNHTRLPTWCNNESDKLPFCQILGEYKMELPQYNTLEPYANMNENCPSLPPTYDRPIR
Subjt:  DAYMLRIFEDNHTRLPTWCNNESDKLPFCQILGEYKMELPQYNTLEPYANMNENCPSLPPTYDRPIR

A0A6J1K7K1 uncharacterized protein LOC111492349

1.0e-93

99.4

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Query:  VISVMSMWTRLQPAYAANMWNEALNKRLGTEDLDLHDILVETEKRGIPFDVLLTIPEQDEWVYSDGKSTTCVAFILAMYKEAGIFGPVSSSIQVTEFTIR
        VISVMSMWTRLQPAYAANMWNEALNKRLGTEDLDLHDILVETEKRGIPFD+LLTIPEQDEWVYSDGKSTTCVAFILAMYKEAGIFGPVSSSIQVTEFTIR
Subjt:  VISVMSMWTRLQPAYAANMWNEALNKRLGTEDLDLHDILVETEKRGIPFDVLLTIPEQDEWVYSDGKSTTCVAFILAMYKEAGIFGPVSSSIQVTEFTIR

Query:  DAYMLRIFEDNHTRLPTWCNNESDKLPFCQILGEYKMELPQYNTLEPYANMNENCPSLPPTYDRPIR
        DAYMLRIFEDNHTRLPTWCNNESDKLPFCQILGEYKMELPQYNTLEPYANMNENCPSLPPTYDRPIR
Subjt:  DAYMLRIFEDNHTRLPTWCNNESDKLPFCQILGEYKMELPQYNTLEPYANMNENCPSLPPTYDRPIR

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G70160.1 unknown protein

1.7e-77

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Query:  VISVMSMWTRLQPAYAANMWNEALNKRLGTEDLDLHDILVETEKRGIPFDVLLTIPEQDEWVYSDGKSTTCVAFILAMYKEAGIFGPVSSSIQVTEFTIR
        VISVMSMWTR+QPAYAANMWNEALNKRLGTEDLDL+ IL ET +RG+ FD LLTIPEQDEWVYSDGKSTTCVAFILAMYK AGIF P++  IQVTEFTIR
Subjt:  VISVMSMWTRLQPAYAANMWNEALNKRLGTEDLDLHDILVETEKRGIPFDVLLTIPEQDEWVYSDGKSTTCVAFILAMYKEAGIFGPVSSSIQVTEFTIR

Query:  DAYMLRIFEDNHTRLPTWCNNESDKLPFCQILGEYKMELPQYNTLEPYANMNENCPSLPPTYDRP
        DAY L++FE N TRLP+WCN E  KL FCQILGEY+MELP YNT+ PY NMN+NCPSLPP Y+RP
Subjt:  DAYMLRIFEDNHTRLPTWCNNESDKLPFCQILGEYKMELPQYNTLEPYANMNENCPSLPPTYDRP

AT4G27020.1 unknown protein

1.4e-71

72.29

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Query:  VISVMSMWTRLQPAYAANMWNEALNKRLGTEDLDLHDILVETEKRGIPFDVLLTIPEQDEWVYSDGKSTTCVAFILAMYKEAGIFGPVSSSIQVTEFTIR
        V SVM++W+++QP YAANMWNEALNKRLGTE LDL D+LVE EKRG  FD LL +PEQD+W+YSDGKST+C+AFIL MYKEAG+F P+SSSIQVTEFTI+
Subjt:  VISVMSMWTRLQPAYAANMWNEALNKRLGTEDLDLHDILVETEKRGIPFDVLLTIPEQDEWVYSDGKSTTCVAFILAMYKEAGIFGPVSSSIQVTEFTIR

Query:  DAYMLRIFEDNHTRLPTWCN-NESDKLPFCQILGEYKMELPQYNTLEPYANMNENCPSLPPTYDRP
        DAYML+ FE N +R P WCN N+  KLP+CQILG+Y+MELP YNT+EPY +MNE+CPSLPP Y RP
Subjt:  DAYMLRIFEDNHTRLPTWCN-NESDKLPFCQILGEYKMELPQYNTLEPYANMNENCPSLPPTYDRP

AT5G54870.1 unknown protein

2.9e-72

72.29

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Query:  VISVMSMWTRLQPAYAANMWNEALNKRLGTEDLDLHDILVETEKRGIPFDVLLTIPEQDEWVYSDGKSTTCVAFILAMYKEAGIFGPVSSSIQVTEFTIR
        V S M++W+++QP YAANMWNEALNKRLGTE LDL D+LVE EKRG  FD LL +PE D+W+YSDGKST+C+AFIL MYKEAG+FGP++SSIQVTEFTI+
Subjt:  VISVMSMWTRLQPAYAANMWNEALNKRLGTEDLDLHDILVETEKRGIPFDVLLTIPEQDEWVYSDGKSTTCVAFILAMYKEAGIFGPVSSSIQVTEFTIR

Query:  DAYMLRIFEDNHTRLPTWCN-NESDKLPFCQILGEYKMELPQYNTLEPYANMNENCPSLPPTYDRP
        DAYML  FE+N +RLPTWCN N+S KLP+CQILG+Y+MELP YNT+EPY++MNE CP+LPP Y+RP
Subjt:  DAYMLRIFEDNHTRLPTWCN-NESDKLPFCQILGEYKMELPQYNTLEPYANMNENCPSLPPTYDRP

Sequences

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CDS sequence

Show/hide CDS sequence

ATGTATTGCACTCATTCATTCATATTGCAGTGGACATGGATGAAGTTGTTGGTCATGTATATGCTTGAATATGGACATACGTATCGAAGGATGATGCACGTTATTTCTGT
CATGTCGATGTGGACAAGGTTGCAGCCAGCATATGCTGCAAATATGTGGAATGAGGCTCTGAACAAGCGGCTAGGAACTGAGGATCTGGACTTGCACGACATTCTAGTCG
AGACTGAGAAGCGAGGAATTCCTTTTGACGTACTGCTTACTATTCCAGAACAAGATGAATGGGTCTACAGCGATGGGAAATCGACAACATGTGTTGCCTTTATCCTTGCA
ATGTACAAGGAGGCTGGAATATTTGGTCCTGTATCCAGCTCCATTCAAGTAACAGAGTTCACTATTCGGGATGCATATATGCTGAGGATTTTCGAGGACAACCATACACG
CCTGCCCACTTGGTGCAACAATGAAAGTGATAAGCTTCCTTTCTGCCAGATTCTTGGTGAGTATAAAATGGAACTGCCTCAGTACAATACCTTAGAACCTTATGCCAATA
TGAACGAAAATTGCCCCTCCCTACCCCCAACCTATGATCGACCCATTCGATCCAGAACTGCACAAACAATGTGCTGTCGGTCACGGTATGAACAACAACAAGCTGTGTTT
ATGTCTTGA

mRNA sequence

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Protein sequence

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MYCTHSFILQWTWMKLLVMYMLEYGHTYRRMMHVISVMSMWTRLQPAYAANMWNEALNKRLGTEDLDLHDILVETEKRGIPFDVLLTIPEQDEWVYSDGKSTTCVAFILA
MYKEAGIFGPVSSSIQVTEFTIRDAYMLRIFEDNHTRLPTWCNNESDKLPFCQILGEYKMELPQYNTLEPYANMNENCPSLPPTYDRPIRSRTAQTMCCRSRYEQQQAVF
MS

CmoCh04G016730 (gene) of Cucurbita moschata (Rifu) v1 genome