CuGenDBv2

Gene ID	CmoCh04G016840
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic
Genome location	Cmo_Chr04:8543192..8548379
RNA-Seq Expression	CmoCh04G016840
Synteny	CmoCh04G016840
Gene Ontology terms	GO:0010190 - cytochrome b6f complex assembly (biological process) GO:0009507 - chloroplast (cellular component)
InterPro domains	IPR021325 - Cofactor assembly of complex C subunit B, CCB2/CCB4 IPR044705 - COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7032167.1 Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]

1.2e-163

99.34

Show/hide

Query:  MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSTDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQS
        MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSTDWVAEWVSKNND VRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQS
Subjt:  MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSTDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQS

Query:  RADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGF-AAESAEGDGEAEHVEA
        RADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGF AAESAEGDGEAEHVEA
Subjt:  RADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGF-AAESAEGDGEAEHVEA

Query:  SKLMQGSLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRG
        SKLMQGSLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRG
Subjt:  SKLMQGSLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRG

Query:  D
        D
Subjt:  D

XP_022956789.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic [Cucurbita moschata]

1.6e-165

100

Show/hide

Query:  MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSTDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQS
        MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSTDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQS
Subjt:  MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSTDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQS

Query:  RADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGFAAESAEGDGEAEHVEAS
        RADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGFAAESAEGDGEAEHVEAS
Subjt:  RADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGFAAESAEGDGEAEHVEAS

Query:  KLMQGSLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD
        KLMQGSLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD
Subjt:  KLMQGSLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD

XP_022984820.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic [Cucurbita maxima]

4.0e-164

99.33

Show/hide

Query:  MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSTDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQS
        MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPS DWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQS
Subjt:  MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSTDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQS

Query:  RADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGFAAESAEGDGEAEHVEAS
        RADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGFAAESAEGDGEAEHVEAS
Subjt:  RADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGFAAESAEGDGEAEHVEAS

Query:  KLMQGSLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD
        KLMQG LYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD
Subjt:  KLMQGSLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD

XP_023513804.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic [Cucurbita pepo subsp. pepo]

5.3e-164

98.67

Show/hide

Query:  MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSTDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQS
        MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSTDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQS
Subjt:  MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSTDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQS

Query:  RADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGFAAESAEGDGEAEHVEAS
        RADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLV+VYDGMCIFQVGFAAESAEGDG+ EHVEA 
Subjt:  RADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGFAAESAEGDGEAEHVEAS

Query:  KLMQGSLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD
        KLMQGSLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD
Subjt:  KLMQGSLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD

XP_038892078.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic isoform X1 [Benincasa hispida]

5.7e-150

Show/hide

Query:  MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSTDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQS
        MEAGIFFPVTPILWSS+ K T CPVRRSFPRIIR SS  SQ SYRGPKPS DWVA+WVSKN+DAVRSLPIYVGGISLL+VLFNR VSGIAPVADASSSQS
Subjt:  MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSTDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQS

Query:  RADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGFAAESAEGDGEAEHVEAS
        RADLLTLGLAVTNVL GLVWLSI+PKSITPVNPQGV CERICSSLPD+V SELLWVW SLSEVTCCRSLVVVYDG CIFQVGFAAESAEGDGEAEHVEA 
Subjt:  RADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGFAAESAEGDGEAEHVEAS

Query:  KLMQGSLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD
        KLMQGSLY G LKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNN QP AKLSS+G+
Subjt:  KLMQGSLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KQF1 Uncharacterized protein

1.8e-141

87.33

Show/hide

Query:  MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSTDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQS
        MEAGIFFP+T I W+ + K T   +R SFP I+RASS  SQ SYRGPKPST+ VA+WVS N+D VRSLPIYVGGISLL+VLFNRAVSGIAPVADASSSQS
Subjt:  MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSTDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQS

Query:  RADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGFAAESAEGDGEAEHVEAS
        RADLLTLGLAVTNVL GLVWLSIRPKSITPVNP GVE ERICSSLPD VTSELLWVWKSLSEVTCCRSLVVVYDG CIFQVGFAAESAEG+GEAEHVEA 
Subjt:  RADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGFAAESAEGDGEAEHVEAS

Query:  KLMQGSLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD
        KLMQGSLYKG+LKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWIS VGEKLDATL KYSNN QPAAKLSS+G+
Subjt:  KLMQGSLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD

A0A5A7ST12 Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4

1.8e-141

Show/hide

Query:  MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSTDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQS
        MEAGIFF VTPI W+S+ K T   +RRSFPRIIRASS  SQ SYRGPKPSTD VA+WVS N+D VRS PIYVGGISLL+VLFNRAVSGIAPVADASSSQS
Subjt:  MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSTDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQS

Query:  RADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGFAAESAEGDGEAEHVEAS
        RADLLTLGLAVTNVL GLVWLSIRPKSITPVNP GVE E ICSSLPD VTSELLWVWKSLSEVTCCRSLVVVYDG CI QVGFAAE AEGDGEAE VEA 
Subjt:  RADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGFAAESAEGDGEAEHVEAS

Query:  KLMQGSLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD
        KLMQG LYKG+LKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAI+GGNTIRGFTTSDQAWISLVGEKLDATLLKYSNN QPAAKLSS G+
Subjt:  KLMQGSLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD

A0A6J1DCN6 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic isoform X1

6.6e-144

84.52

Show/hide

Query:  MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQAS----------YRGPKPSTDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIA
        MEAGIFF V PILWS + KC LCPVRRSFPRIIRASS +S +S          YRGPKP+ DWVA+WV++N+DAVRSLPI+VGGISLLVVLFNRAVSGIA
Subjt:  MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQAS----------YRGPKPSTDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIA

Query:  PVADASSSQSRADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGFAAESAEG
        PVADASSSQSRADLLTLGLAVTNVL GLVWLSIRPKSITPVN QGV C+R+CSSLPDLVT ELLWVW+SLSEVTCCRSLVVVYDGMC+FQVGFAAES EG
Subjt:  PVADASSSQSRADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGFAAESAEG

Query:  DGEAEHVEASKLMQGSLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQ
        DGEAEHV+AS+LMQGSLY+GI KS+AQSYLANLSLYPGKSELPFLPSNTQAVILQPLG+KGIA+IGGNTIRGFTTSDQAWISLVGEKLDATL KYSNN Q
Subjt:  DGEAEHVEASKLMQGSLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQ

Query:  PAAKLSSRGD
        PA KLSS G+
Subjt:  PAAKLSSRGD

A0A6J1H029 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic

8.0e-166

100

Show/hide

Query:  MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSTDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQS
        MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSTDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQS
Subjt:  MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSTDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQS

Query:  RADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGFAAESAEGDGEAEHVEAS
        RADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGFAAESAEGDGEAEHVEAS
Subjt:  RADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGFAAESAEGDGEAEHVEAS

Query:  KLMQGSLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD
        KLMQGSLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD
Subjt:  KLMQGSLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD

A0A6J1J9M5 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic

2.0e-164

99.33

Show/hide

Query:  MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSTDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQS
        MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPS DWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQS
Subjt:  MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSTDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQS

Query:  RADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGFAAESAEGDGEAEHVEAS
        RADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGFAAESAEGDGEAEHVEAS
Subjt:  RADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGFAAESAEGDGEAEHVEAS

Query:  KLMQGSLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD
        KLMQG LYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD
Subjt:  KLMQGSLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD

SwissProt top hits

e value

%identity

Alignment

Q6NQK9 Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic

1.9e-103

67.71

Show/hide

Query:  MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQ---ASYRGPKPSTDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASS
        MEA I      I WS++ + +  P+   FPR IRASS ++     +Y GPKP  + VA+++SKN+D VRSLPIYVGG SLL VLFNR VSGIAPVADASS
Subjt:  MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQ---ASYRGPKPSTDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASS

Query:  SQSRADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGFAAESAEGDGEAEHV
        SQSRADLL LGLAVTN+LTGLVWLSIRPKSITPVNP+GVEC+ + S LP  + SELLW W+SL   TCC+SLV+VY+G+C+ Q+G  AES E D +   V
Subjt:  SQSRADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGFAAESAEGDGEAEHV

Query:  EASKLMQGSLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKY
        +  KLMQGS+Y+G++KS+AQSYLANLSLYPG+SELPFLP+NTQAVILQPLG+KGIA+IGGNTIRGFT+SDQAWIS +GEKLDATL +Y
Subjt:  EASKLMQGSLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKY

Arabidopsis top hits

e value

%identity

Alignment

AT1G59840.1 cofactor assembly of complex C

1.3e-104

67.71

Show/hide

Query:  MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQ---ASYRGPKPSTDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASS
        MEA I      I WS++ + +  P+   FPR IRASS ++     +Y GPKP  + VA+++SKN+D VRSLPIYVGG SLL VLFNR VSGIAPVADASS
Subjt:  MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQ---ASYRGPKPSTDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASS

Query:  SQSRADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGFAAESAEGDGEAEHV
        SQSRADLL LGLAVTN+LTGLVWLSIRPKSITPVNP+GVEC+ + S LP  + SELLW W+SL   TCC+SLV+VY+G+C+ Q+G  AES E D +   V
Subjt:  SQSRADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGFAAESAEGDGEAEHV

Query:  EASKLMQGSLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKY
        +  KLMQGS+Y+G++KS+AQSYLANLSLYPG+SELPFLP+NTQAVILQPLG+KGIA+IGGNTIRGFT+SDQAWIS +GEKLDATL +Y
Subjt:  EASKLMQGSLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKY

AT1G59840.2 cofactor assembly of complex C

1.3e-104

67.71

Show/hide

Query:  MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQ---ASYRGPKPSTDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASS
        MEA I      I WS++ + +  P+   FPR IRASS ++     +Y GPKP  + VA+++SKN+D VRSLPIYVGG SLL VLFNR VSGIAPVADASS
Subjt:  MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQ---ASYRGPKPSTDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASS

Query:  SQSRADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGFAAESAEGDGEAEHV
        SQSRADLL LGLAVTN+LTGLVWLSIRPKSITPVNP+GVEC+ + S LP  + SELLW W+SL   TCC+SLV+VY+G+C+ Q+G  AES E D +   V
Subjt:  SQSRADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGFAAESAEGDGEAEHV

Query:  EASKLMQGSLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKY
        +  KLMQGS+Y+G++KS+AQSYLANLSLYPG+SELPFLP+NTQAVILQPLG+KGIA+IGGNTIRGFT+SDQAWIS +GEKLDATL +Y
Subjt:  EASKLMQGSLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKY

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAAGCGGGAATTTTCTTCCCCGTCACTCCAATTCTATGGAGTTCTAGTTTGAAGTGCACTCTCTGTCCCGTTCGTCGCTCTTTCCCGCGTATCATAAGGGCTTCTTC
CTTGAATTCGCAAGCAAGTTACAGAGGGCCGAAGCCTTCAACGGATTGGGTGGCCGAATGGGTATCCAAGAACAACGATGCCGTTCGGAGTTTGCCCATTTACGTCGGTG
GAATTTCTCTATTGGTCGTCCTCTTTAACCGCGCCGTTTCAGGCATTGCTCCCGTCGCCGATGCCAGCAGTTCACAGTCAAGAGCTGATCTATTAACCCTTGGACTAGCC
GTCACAAATGTCTTGACTGGTCTGGTATGGCTGTCGATCAGGCCGAAATCTATAACACCGGTGAATCCACAAGGAGTAGAATGTGAGAGGATATGCTCCAGTCTCCCTGA
TCTTGTAACATCCGAGTTGTTATGGGTATGGAAGTCTCTGTCAGAAGTGACATGCTGCAGGTCTCTGGTTGTTGTCTACGATGGTATGTGTATATTTCAAGTTGGTTTTG
CTGCTGAATCAGCTGAGGGTGATGGGGAGGCCGAACATGTTGAAGCTAGTAAACTGATGCAGGGATCGCTCTATAAGGGAATTCTCAAATCCCAAGCTCAGAGCTACTTG
GCCAATCTTTCTCTTTATCCAGGGAAGTCGGAGCTGCCATTTCTTCCCTCAAATACTCAGGCTGTGATCTTGCAACCACTTGGGGAGAAGGGTATTGCTATAATTGGTGG
CAACACTATCAGGGGTTTCACAACCTCTGATCAGGCATGGATTTCACTAGTTGGAGAGAAGCTGGATGCTACGCTGTTGAAATATTCAAATAATTTGCAACCAGCGGCAA
AATTGAGCTCAAGAGGGGACTGA

mRNA sequence

Show/hide mRNA sequence

TTACGGACTTCATTCTTGAAGTAAGTATCATTTCACTCGGTTTCGATGGAAGCGGGAATTTTCTTCCCCGTCACTCCAATTCTATGGAGTTCTAGTTTGAAGTGCACTCT
CTGTCCCGTTCGTCGCTCTTTCCCGCGTATCATAAGGGCTTCTTCCTTGAATTCGCAAGCAAGTTACAGAGGGCCGAAGCCTTCAACGGATTGGGTGGCCGAATGGGTAT
CCAAGAACAACGATGCCGTTCGGAGTTTGCCCATTTACGTCGGTGGAATTTCTCTATTGGTCGTCCTCTTTAACCGCGCCGTTTCAGGCATTGCTCCCGTCGCCGATGCC
AGCAGTTCACAGTCAAGAGCTGATCTATTAACCCTTGGACTAGCCGTCACAAATGTCTTGACTGGTCTGGTATGGCTGTCGATCAGGCCGAAATCTATAACACCGGTGAA
TCCACAAGGAGTAGAATGTGAGAGGATATGCTCCAGTCTCCCTGATCTTGTAACATCCGAGTTGTTATGGGTATGGAAGTCTCTGTCAGAAGTGACATGCTGCAGGTCTC
TGGTTGTTGTCTACGATGGTATGTGTATATTTCAAGTTGGTTTTGCTGCTGAATCAGCTGAGGGTGATGGGGAGGCCGAACATGTTGAAGCTAGTAAACTGATGCAGGGA
TCGCTCTATAAGGGAATTCTCAAATCCCAAGCTCAGAGCTACTTGGCCAATCTTTCTCTTTATCCAGGGAAGTCGGAGCTGCCATTTCTTCCCTCAAATACTCAGGCTGT
GATCTTGCAACCACTTGGGGAGAAGGGTATTGCTATAATTGGTGGCAACACTATCAGGGGTTTCACAACCTCTGATCAGGCATGGATTTCACTAGTTGGAGAGAAGCTGG
ATGCTACGCTGTTGAAATATTCAAATAATTTGCAACCAGCGGCAAAATTGAGCTCAAGAGGGGACTGAAGTGTTGATGGACAACACAAAATGGTTATTAGGTTGTACCTT
TTATTTATTTCCAATGTTTTTAAACCATTGGGTGGAAGAGAAATAACATTGACGCCTGGAAAGGCAGGCGAAGCAACTCAACTAAGTAGTTGATTTATATGTATAGTCGA
TACATCATTAATGCAAAAGCTTCTCCTTTTTCGACCATTGACTCTAGGTATATTCACTGATTGGTGGTAATGCCTGGTTCATTCCTTTTTTTTTTCTAATGCATTTTCTT
TGTCTGTGGTAATGCTGACTGCATTTCTCTCAAGATGTGTGACATAGCAGACAGCAAATGTTATATTCAAATTTGAAGAATGAATCAGAAAGAATTTCATTCCAACATCT
GAAAAGTGTCCCTAAGCTGCAGGTTGCCAAGAGTTGTTAACCAGAAGCTTTTTCCCACGGTAGGTATCCTGTCAAAGGATCAGAGAACAAAGTCTGGACAAAGTCTCGCA
GTCCAGTGTCCCAAACTTCACAGAACTGTAACCTCCAATTGGGTGGTTCGATTGCCTCTGTCCCAAGCCCAGGTGCTCTATCCTTCGATCCTTCATTCTGTGCCTCCTGC
CAGTCAACAACATAGCATTGCTTTTTGGTACGTCAAAAAACCCAGATCCTCGTTTCAACCTAAAGTGATGAACGACATTGAGAAGTGTTGGGTCAAGCAAGTCTGGCCGG
ACAAACGATTTGTGCCTCTCGGGACTCTGGAGCCGGCAAGTGTACCCTATTGTCACCCCCTGCGGTGGATATGATGTTAAACCTGATGGTCCGAAGCTATGGCAGGCCGT
TCTAATCTCTGCAATGGTAGTTGAATTGGAGGTTGAAGCAGATGAGTTAGCAATGAGTGAATGAAGGGCATTGCGGCCGGCAGTATGGTATGCTTGCTGACGGCGATACT
TTGAAGGAAAGTAGAAAAACTCATCAACATCAAAGAAACCGACCCACTTGCATTCATCTCTAGCTCTCAAAGCACAGTGTGAGAAGCCTGCTTCTTGGGTTTTAATCCAT
GGCCAGGTCAGCCTACTGATATTGTAGTTTTCCAGGTTGAGCTCTCTAACGACTTCTTCAATGTCATCATCACTATTGTTGTCGTAGATAAACCAGCGCCCTACCCCAAG
CCAAGCGTGCTCATTCAGCTTGGAGATGGAGAGTCTGGCCACTGAGGGCAGAGTCACCTGAAGGTGGGCTTTCGTATTGACACTGCCACGGCCCACAGTAACCCGAATTC
CCTTTTCCTTGTCTAAAGTGCTCGACACACCAGCCGGCAAGGAGCACCTGATAATTTCTTGAGCTGCAGTTACTGCCTTTGTGGTAAGCACATAATCTCCGTTATTGTTG
GAATTTCTCAGTCTAAAGTGGCAGCTGAATTCGGTCGGATTTGATTCCTTGTGTGGTCGGAGATTTAGTCCCTTGGCAAACACCACAACCGTATCACCGTCAATAGCTGC
CTCATAAACCACCCTCTCCCACGAGGCAACTGGATGCCTATTTCTGACCAACCAATGGTCATCGGCTTCCACGCCAACCCACCTCAAGTCCACGGCGGAGGCCGAATAAT
TCCGCGGCGGCAGTGGACATCTGGCAATTGATCGGAACTCATCGTACCTGTCCGTGGACAGAACTGACTGTTTGAGAGTGTCACGACCCCAAATTAAGCCGTGACTAACA
TTGTATGACATGTAATGCATAAACGAGAAATTCAAGGAAATCATTTGTTTCAAAAGAAAAACATATCTTTATTAGAAGGACATAAGTGCCTAGGTAAAAGAAAAACAAGG
AAAGGAACATGTGAGACAAAGTGTACTATTTAGTAAACTAGACTGACGCCCCGGGACACGCTTCCTCTGTGACAACCCACATCGATCGACGCGCCCTCTCTTGACTCGAC
GCCTCACGTACCTGAAA

Protein sequence

Show/hide protein sequence

MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSTDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLA
VTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGFAAESAEGDGEAEHVEASKLMQGSLYKGILKSQAQSYL
ANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD

CmoCh04G016840 (gene) of Cucurbita moschata (Rifu) v1 genome