CuGenDBv2

Gene ID	CmoCh04G016870
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	EF-hand domain-containing protein
Genome location	Cmo_Chr04:8556932..8560044
RNA-Seq Expression	CmoCh04G016870
Synteny	CmoCh04G016870
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component) GO:0005509 - calcium ion binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6601391.1 hypothetical protein SDJN03_06624, partial [Cucurbita argyrosperma subsp. sororia]

5.1e-116

98.62

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Query:  MCWNSVLLPVLLLLFSFFASLDAQLQNTDRVEGNEEIEIGFGRRALLSFKETPQGSNVSFECSRSGPCIACLYSEKNDEKYRCSETGYRIPLKCVEIKDT
        MCWNS+LLPVLLLLFSFFASLDAQLQNTDRVEGNEEIEIGFGRRALLSFKETPQGSNVSFECSRSGPCIACLYSEKNDEKYRCSETGYRIPLKCVEIKDT
Subjt:  MCWNSVLLPVLLLLFSFFASLDAQLQNTDRVEGNEEIEIGFGRRALLSFKETPQGSNVSFECSRSGPCIACLYSEKNDEKYRCSETGYRIPLKCVEIKDT

Query:  SKVSNEKKSHDGRSMLEMSYEHKLVIPVLNDASGHASPIAQRNLRDGSISATDGAQAYTTYRSCIPSVNEEKLSVLGFEGIVLCLLLVSGSFIYIRRKRT
        SKVSNEKKSHDGRSMLEMSYEHKLVIPVLNDA GHASPIA RNLRDGSISATDGAQAYTTYRSCIPSVNEEKLSVLGFEGIVLCLLLVSGSFIYIRRKRT
Subjt:  SKVSNEKKSHDGRSMLEMSYEHKLVIPVLNDASGHASPIAQRNLRDGSISATDGAQAYTTYRSCIPSVNEEKLSVLGFEGIVLCLLLVSGSFIYIRRKRT

Query:  VSTAGFASGRLQSNSRF
        VSTAGFASGRLQSNSRF
Subjt:  VSTAGFASGRLQSNSRF

KAG7032169.1 hypothetical protein SDJN02_06212, partial [Cucurbita argyrosperma subsp. argyrosperma]

4.3e-115

98.16

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Query:  MCWNSVLLPVLLLLFSFFASLDAQLQNTDRVEGNEEIEIGFGRRALLSFKETPQGSNVSFECSRSGPCIACLYSEKNDEKYRCSETGYRIPLKCVEIKDT
        MCWNS+LLPVLLLLFSF ASLDAQLQNTDRVEGNEEIEIGFGRRALLSFKETPQGSNVSFECSRSGPCIACLYSEKNDEKYRCSETGYRIPLKCVEIKDT
Subjt:  MCWNSVLLPVLLLLFSFFASLDAQLQNTDRVEGNEEIEIGFGRRALLSFKETPQGSNVSFECSRSGPCIACLYSEKNDEKYRCSETGYRIPLKCVEIKDT

Query:  SKVSNEKKSHDGRSMLEMSYEHKLVIPVLNDASGHASPIAQRNLRDGSISATDGAQAYTTYRSCIPSVNEEKLSVLGFEGIVLCLLLVSGSFIYIRRKRT
        SKVSNEKKSHDGRSMLEMSYEHKLVIPVLNDA GHASPIA RNLRDGSISATDGAQAYTTYRSCIPSVNEEKLSVLGFEGIVLCLLLVSGSFIYIRRKRT
Subjt:  SKVSNEKKSHDGRSMLEMSYEHKLVIPVLNDASGHASPIAQRNLRDGSISATDGAQAYTTYRSCIPSVNEEKLSVLGFEGIVLCLLLVSGSFIYIRRKRT

Query:  VSTAGFASGRLQSNSRF
        VSTAGFASGRLQSNSRF
Subjt:  VSTAGFASGRLQSNSRF

XP_022956920.1 uncharacterized protein LOC111458461 isoform X1 [Cucurbita moschata]

1.6e-117

100

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Query:  MCWNSVLLPVLLLLFSFFASLDAQLQNTDRVEGNEEIEIGFGRRALLSFKETPQGSNVSFECSRSGPCIACLYSEKNDEKYRCSETGYRIPLKCVEIKDT
        MCWNSVLLPVLLLLFSFFASLDAQLQNTDRVEGNEEIEIGFGRRALLSFKETPQGSNVSFECSRSGPCIACLYSEKNDEKYRCSETGYRIPLKCVEIKDT
Subjt:  MCWNSVLLPVLLLLFSFFASLDAQLQNTDRVEGNEEIEIGFGRRALLSFKETPQGSNVSFECSRSGPCIACLYSEKNDEKYRCSETGYRIPLKCVEIKDT

Query:  SKVSNEKKSHDGRSMLEMSYEHKLVIPVLNDASGHASPIAQRNLRDGSISATDGAQAYTTYRSCIPSVNEEKLSVLGFEGIVLCLLLVSGSFIYIRRKRT
        SKVSNEKKSHDGRSMLEMSYEHKLVIPVLNDASGHASPIAQRNLRDGSISATDGAQAYTTYRSCIPSVNEEKLSVLGFEGIVLCLLLVSGSFIYIRRKRT
Subjt:  SKVSNEKKSHDGRSMLEMSYEHKLVIPVLNDASGHASPIAQRNLRDGSISATDGAQAYTTYRSCIPSVNEEKLSVLGFEGIVLCLLLVSGSFIYIRRKRT

Query:  VSTAGFASGRLQSNSRF
        VSTAGFASGRLQSNSRF
Subjt:  VSTAGFASGRLQSNSRF

XP_022956921.1 uncharacterized protein LOC111458461 isoform X2 [Cucurbita moschata]

9.6e-115

99.08

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Query:  MCWNSVLLPVLLLLFSFFASLDAQLQNTDRVEGNEEIEIGFGRRALLSFKETPQGSNVSFECSRSGPCIACLYSEKNDEKYRCSETGYRIPLKCVEIKDT
        MCWNSVLLPVLLLLFSFFASLDAQLQNT  VEGNEEIEIGFGRRALLSFKETPQGSNVSFECSRSGPCIACLYSEKNDEKYRCSETGYRIPLKCVEIKDT
Subjt:  MCWNSVLLPVLLLLFSFFASLDAQLQNTDRVEGNEEIEIGFGRRALLSFKETPQGSNVSFECSRSGPCIACLYSEKNDEKYRCSETGYRIPLKCVEIKDT

Query:  SKVSNEKKSHDGRSMLEMSYEHKLVIPVLNDASGHASPIAQRNLRDGSISATDGAQAYTTYRSCIPSVNEEKLSVLGFEGIVLCLLLVSGSFIYIRRKRT
        SKVSNEKKSHDGRSMLEMSYEHKLVIPVLNDASGHASPIAQRNLRDGSISATDGAQAYTTYRSCIPSVNEEKLSVLGFEGIVLCLLLVSGSFIYIRRKRT
Subjt:  SKVSNEKKSHDGRSMLEMSYEHKLVIPVLNDASGHASPIAQRNLRDGSISATDGAQAYTTYRSCIPSVNEEKLSVLGFEGIVLCLLLVSGSFIYIRRKRT

Query:  VSTAGFASGRLQSNSRF
        VSTAGFASGRLQSNSRF
Subjt:  VSTAGFASGRLQSNSRF

XP_023513837.1 uncharacterized protein LOC111778321 [Cucurbita pepo subsp. pepo]

5.8e-112

95.39

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Query:  MCWNSVLLPVLLLLFSFFASLDAQLQNTDRVEGNEEIEIGFGRRALLSFKETPQGSNVSFECSRSGPCIACLYSEKNDEKYRCSETGYRIPLKCVEIKDT
        MCWNS++LPVLLLLF F ASLDAQLQNTDRVE NE IEIGFGRRALLSFKETPQGSNV+FECSRSGPCIACLYSEKNDEKYRCSETGYRIPLKCVEIKDT
Subjt:  MCWNSVLLPVLLLLFSFFASLDAQLQNTDRVEGNEEIEIGFGRRALLSFKETPQGSNVSFECSRSGPCIACLYSEKNDEKYRCSETGYRIPLKCVEIKDT

Query:  SKVSNEKKSHDGRSMLEMSYEHKLVIPVLNDASGHASPIAQRNLRDGSISATDGAQAYTTYRSCIPSVNEEKLSVLGFEGIVLCLLLVSGSFIYIRRKRT
        S+VSNEKKSHDGRSMLEMSYEHKLVIPVLNDASGHASPIA RNLRDGSIS TDGAQAYTTYRSCIPSVNEEKLSVLGFEGIVLCLLLVSGSFIYIRRKRT
Subjt:  SKVSNEKKSHDGRSMLEMSYEHKLVIPVLNDASGHASPIAQRNLRDGSISATDGAQAYTTYRSCIPSVNEEKLSVLGFEGIVLCLLLVSGSFIYIRRKRT

Query:  VSTAGFASGRLQSNSRF
        VSTAGFASGRLQSNSRF
Subjt:  VSTAGFASGRLQSNSRF

TrEMBL top hits

e value

%identity

Alignment

A0A6J1DAC4 uncharacterized protein LOC111019130

1.5e-94

82.03

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Query:  MCWNSVLLPVLLLLFSFFASLDAQLQNTDRVEGNEEIEIGFGRRALLSFKETPQGSNVSFECSRSGPCIACLYSEKNDEKYRCSETGYRIPLKCVEIKDT
        MC N  L P LLLLFS  ASLDA++QNTD V GNE+IE+GFGRRALLSFKETP+GSNV+FECSRSGPC+ACLYSEKNDEKYRCSETGYRIPLKCVEIKDT
Subjt:  MCWNSVLLPVLLLLFSFFASLDAQLQNTDRVEGNEEIEIGFGRRALLSFKETPQGSNVSFECSRSGPCIACLYSEKNDEKYRCSETGYRIPLKCVEIKDT

Query:  SKVSNEKKSHDGRSMLEMSYEHKLVIPVLNDASGHASPIAQRNLRDGSISATDGAQAYTTYRSCIPSVNEEKLSVLGFEGIVLCLLLVSGSFIYIRRKRT
        S VS EKKSH+GRSM EMSYEHKLVIPV NDAS HAS    RNLRD S+S TDG+QAY TYRSCIPS NEEKLSVLGFEGIVLCLLLVSG  +Y RRKRT
Subjt:  SKVSNEKKSHDGRSMLEMSYEHKLVIPVLNDASGHASPIAQRNLRDGSISATDGAQAYTTYRSCIPSVNEEKLSVLGFEGIVLCLLLVSGSFIYIRRKRT

Query:  VSTAGFASGRLQSNSRF
        VSTAGFA+GR+QSN RF
Subjt:  VSTAGFASGRLQSNSRF

A0A6J1GXT8 uncharacterized protein LOC111458461 isoform X2

4.6e-115

99.08

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Query:  MCWNSVLLPVLLLLFSFFASLDAQLQNTDRVEGNEEIEIGFGRRALLSFKETPQGSNVSFECSRSGPCIACLYSEKNDEKYRCSETGYRIPLKCVEIKDT
        MCWNSVLLPVLLLLFSFFASLDAQLQNT  VEGNEEIEIGFGRRALLSFKETPQGSNVSFECSRSGPCIACLYSEKNDEKYRCSETGYRIPLKCVEIKDT
Subjt:  MCWNSVLLPVLLLLFSFFASLDAQLQNTDRVEGNEEIEIGFGRRALLSFKETPQGSNVSFECSRSGPCIACLYSEKNDEKYRCSETGYRIPLKCVEIKDT

Query:  SKVSNEKKSHDGRSMLEMSYEHKLVIPVLNDASGHASPIAQRNLRDGSISATDGAQAYTTYRSCIPSVNEEKLSVLGFEGIVLCLLLVSGSFIYIRRKRT
        SKVSNEKKSHDGRSMLEMSYEHKLVIPVLNDASGHASPIAQRNLRDGSISATDGAQAYTTYRSCIPSVNEEKLSVLGFEGIVLCLLLVSGSFIYIRRKRT
Subjt:  SKVSNEKKSHDGRSMLEMSYEHKLVIPVLNDASGHASPIAQRNLRDGSISATDGAQAYTTYRSCIPSVNEEKLSVLGFEGIVLCLLLVSGSFIYIRRKRT

Query:  VSTAGFASGRLQSNSRF
        VSTAGFASGRLQSNSRF
Subjt:  VSTAGFASGRLQSNSRF

A0A6J1GZ36 uncharacterized protein LOC111458461 isoform X1

7.6e-118

100

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Query:  MCWNSVLLPVLLLLFSFFASLDAQLQNTDRVEGNEEIEIGFGRRALLSFKETPQGSNVSFECSRSGPCIACLYSEKNDEKYRCSETGYRIPLKCVEIKDT
        MCWNSVLLPVLLLLFSFFASLDAQLQNTDRVEGNEEIEIGFGRRALLSFKETPQGSNVSFECSRSGPCIACLYSEKNDEKYRCSETGYRIPLKCVEIKDT
Subjt:  MCWNSVLLPVLLLLFSFFASLDAQLQNTDRVEGNEEIEIGFGRRALLSFKETPQGSNVSFECSRSGPCIACLYSEKNDEKYRCSETGYRIPLKCVEIKDT

Query:  SKVSNEKKSHDGRSMLEMSYEHKLVIPVLNDASGHASPIAQRNLRDGSISATDGAQAYTTYRSCIPSVNEEKLSVLGFEGIVLCLLLVSGSFIYIRRKRT
        SKVSNEKKSHDGRSMLEMSYEHKLVIPVLNDASGHASPIAQRNLRDGSISATDGAQAYTTYRSCIPSVNEEKLSVLGFEGIVLCLLLVSGSFIYIRRKRT
Subjt:  SKVSNEKKSHDGRSMLEMSYEHKLVIPVLNDASGHASPIAQRNLRDGSISATDGAQAYTTYRSCIPSVNEEKLSVLGFEGIVLCLLLVSGSFIYIRRKRT

Query:  VSTAGFASGRLQSNSRF
        VSTAGFASGRLQSNSRF
Subjt:  VSTAGFASGRLQSNSRF

A0A6J1JTF7 uncharacterized protein LOC111488176 isoform X1

1.5e-110

94.47

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Query:  MCWNSVLLPVLLLLFSFFASLDAQLQNTDRVEGNEEIEIGFGRRALLSFKETPQGSNVSFECSRSGPCIACLYSEKNDEKYRCSETGYRIPLKCVEIKDT
        MCWNS+LLPVLLLLFSF ASLDAQLQNT RV GNEEIEIGFGRRALLSFKETPQGSNV+FECSRSGPCIACLYSEKNDEKYRCSETGYRIPLKCVEIKDT
Subjt:  MCWNSVLLPVLLLLFSFFASLDAQLQNTDRVEGNEEIEIGFGRRALLSFKETPQGSNVSFECSRSGPCIACLYSEKNDEKYRCSETGYRIPLKCVEIKDT

Query:  SKVSNEKKSHDGRSMLEMSYEHKLVIPVLNDASGHASPIAQRNLRDGSISATDGAQAYTTYRSCIPSVNEEKLSVLGFEGIVLCLLLVSGSFIYIRRKRT
        SKVS E+KSHDGRS+LEMSYEHKLVIPVLNDA GHASPIA R LRDGSISATDGAQAYTTYRSCIPSVNEEKLSVLGFEGIVLCLLLVSGSF+YIRRKRT
Subjt:  SKVSNEKKSHDGRSMLEMSYEHKLVIPVLNDASGHASPIAQRNLRDGSISATDGAQAYTTYRSCIPSVNEEKLSVLGFEGIVLCLLLVSGSFIYIRRKRT

Query:  VSTAGFASGRLQSNSRF
        VSTAGFASGRLQSNSRF
Subjt:  VSTAGFASGRLQSNSRF

A0A6J1JVD0 uncharacterized protein LOC111488176 isoform X2

1.4e-108

94.01

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Query:  MCWNSVLLPVLLLLFSFFASLDAQLQNTDRVEGNEEIEIGFGRRALLSFKETPQGSNVSFECSRSGPCIACLYSEKNDEKYRCSETGYRIPLKCVEIKDT
        MCWNS+LLPVLLLLFSF ASLDAQLQNT  V GNEEIEIGFGRRALLSFKETPQGSNV+FECSRSGPCIACLYSEKNDEKYRCSETGYRIPLKCVEIKDT
Subjt:  MCWNSVLLPVLLLLFSFFASLDAQLQNTDRVEGNEEIEIGFGRRALLSFKETPQGSNVSFECSRSGPCIACLYSEKNDEKYRCSETGYRIPLKCVEIKDT

Query:  SKVSNEKKSHDGRSMLEMSYEHKLVIPVLNDASGHASPIAQRNLRDGSISATDGAQAYTTYRSCIPSVNEEKLSVLGFEGIVLCLLLVSGSFIYIRRKRT
        SKVS E+KSHDGRS+LEMSYEHKLVIPVLNDA GHASPIA R LRDGSISATDGAQAYTTYRSCIPSVNEEKLSVLGFEGIVLCLLLVSGSF+YIRRKRT
Subjt:  SKVSNEKKSHDGRSMLEMSYEHKLVIPVLNDASGHASPIAQRNLRDGSISATDGAQAYTTYRSCIPSVNEEKLSVLGFEGIVLCLLLVSGSFIYIRRKRT

Query:  VSTAGFASGRLQSNSRF
        VSTAGFASGRLQSNSRF
Subjt:  VSTAGFASGRLQSNSRF

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G69980.1 unknown protein

9.4e-44

48.17

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Query:  NSVLLPVLLLLFSFFASLDAQ-LQNTDRVEGNEEIEIGFGRRALLSFKETPQGSNVSFECSRSGPCIACLYSEKNDEKYRCSETGYRIPLKCVEIKDTSK
        +S L  V+  +F + +S+ +  L      +G+EEI    GRR LL FKETP+GSN++F CS SGPC++C  SEK  EKYRCSETGYRIP KC E+++  +
Subjt:  NSVLLPVLLLLFSFFASLDAQ-LQNTDRVEGNEEIEIGFGRRALLSFKETPQGSNVSFECSRSGPCIACLYSEKNDEKYRCSETGYRIPLKCVEIKDTSK

Query:  VSNEKKSHDGRSMLEMSYEHKLVIPVLNDASGHASPIAQ-RNLRDGSISATD-GAQAYTTYRSCIPSVNEEKLSVLGFEGIVLCLLLVSGSFIYIRRKRT
        V   KK+ +  +               ND S +    A+ RNL D S  AT   +Q+Y TYRSC+PS +EEKLSVLGFE I+L L L+SG+ IYIR+++T
Subjt:  VSNEKKSHDGRSMLEMSYEHKLVIPVLNDASGHASPIAQ-RNLRDGSISATD-GAQAYTTYRSCIPSVNEEKLSVLGFEGIVLCLLLVSGSFIYIRRKRT

Query:  VSTAGF-ASGRLQSNSRF
        V   G  +SGRLQ NSRF
Subjt:  VSTAGF-ASGRLQSNSRF

Sequences

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CDS sequence

Show/hide CDS sequence

ATGTGTTGGAATTCTGTGTTGCTTCCTGTTCTTCTGCTTCTTTTCAGCTTCTTTGCTTCACTTGACGCCCAATTGCAGAATACAGACAGAGTTGAGGGGAATGAAGAAAT
TGAGATAGGGTTTGGGCGCAGAGCTCTGTTGAGTTTCAAAGAGACTCCACAGGGAAGTAACGTTAGCTTTGAATGCTCTCGTTCTGGCCCCTGTATTGCCTGCCTCTACT
CTGAAAAGAATGATGAAAAATATCGCTGCAGTGAGACTGGCTACCGTATTCCCCTGAAATGTGTGGAGATCAAAGACACTTCAAAAGTTTCCAATGAGAAAAAATCTCAT
GATGGTCGCTCAATGCTTGAAATGTCTTATGAGCACAAGCTAGTGATCCCTGTGCTGAATGATGCAAGTGGTCATGCTTCACCAATTGCACAAAGAAATTTAAGAGATGG
TTCTATCTCAGCAACAGATGGTGCTCAGGCTTACACCACTTATAGAAGCTGTATTCCATCAGTTAATGAAGAAAAGTTGTCTGTACTTGGTTTTGAGGGCATTGTGCTAT
GTTTGCTGCTGGTAAGTGGTTCATTTATTTACATCAGAAGGAAGCGAACTGTTTCAACGGCTGGTTTTGCTTCTGGCAGGCTGCAGTCAAATTCCAGGTTTTAG

mRNA sequence

Show/hide mRNA sequence

TTTCATGGTATCTCTGACTTTCAAATGTTTATTCACATACCCTAAACTTTCCATATTTATAAAAGTCACCTCTGAAAATGGAAGGGGGAAAGGAGATTAACGTGGCAAAT
ATGTAATTAAAGAAACTACAGGGGAAGGGGGAGAATATAGAAACTGTAAGGCTCTAGTGCGTGAATTCAGTTCGCAGATTTGATTTTGGTGAGAGAGACGAAAAGAGAGA
AGGCGGTTACGTCGGGAGAAAAAATGTGTTGGAATTCTGTGTTGCTTCCTGTTCTTCTGCTTCTTTTCAGCTTCTTTGCTTCACTTGACGCCCAATTGCAGAATACAGAC
AGAGTTGAGGGGAATGAAGAAATTGAGATAGGGTTTGGGCGCAGAGCTCTGTTGAGTTTCAAAGAGACTCCACAGGGAAGTAACGTTAGCTTTGAATGCTCTCGTTCTGG
CCCCTGTATTGCCTGCCTCTACTCTGAAAAGAATGATGAAAAATATCGCTGCAGTGAGACTGGCTACCGTATTCCCCTGAAATGTGTGGAGATCAAAGACACTTCAAAAG
TTTCCAATGAGAAAAAATCTCATGATGGTCGCTCAATGCTTGAAATGTCTTATGAGCACAAGCTAGTGATCCCTGTGCTGAATGATGCAAGTGGTCATGCTTCACCAATT
GCACAAAGAAATTTAAGAGATGGTTCTATCTCAGCAACAGATGGTGCTCAGGCTTACACCACTTATAGAAGCTGTATTCCATCAGTTAATGAAGAAAAGTTGTCTGTACT
TGGTTTTGAGGGCATTGTGCTATGTTTGCTGCTGGTAAGTGGTTCATTTATTTACATCAGAAGGAAGCGAACTGTTTCAACGGCTGGTTTTGCTTCTGGCAGGCTGCAGT
CAAATTCCAGGTTTTAGTTTAGTTTAGTCAGGAGTCTTCTTTTGTTACAATTGTTCATGTGACATAAATGTATTATCCACGAATACAACAAATTGAAATTATAGATGTAT
CAACACCTAGGAACTGAATGGTTGCACATACTTTTCTCCCTGTTCCATTATTTCGAAACGAAATCAACCAATTCGACT

Protein sequence

Show/hide protein sequence

MCWNSVLLPVLLLLFSFFASLDAQLQNTDRVEGNEEIEIGFGRRALLSFKETPQGSNVSFECSRSGPCIACLYSEKNDEKYRCSETGYRIPLKCVEIKDTSKVSNEKKSH
DGRSMLEMSYEHKLVIPVLNDASGHASPIAQRNLRDGSISATDGAQAYTTYRSCIPSVNEEKLSVLGFEGIVLCLLLVSGSFIYIRRKRTVSTAGFASGRLQSNSRF

CmoCh04G016870 (gene) of Cucurbita moschata (Rifu) v1 genome