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CmoCh04G016920 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G016920
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr04:8591788..8592757
RNA-Seq ExpressionCmoCh04G016920
SyntenyCmoCh04G016920
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601396.1 Tetratricopeptide repeat protein 38, partial [Cucurbita argyrosperma subsp. sororia]6.7e-3397.06Show/hide
Query:  MRGGGDDRHQNADAECKQLANSILMENDSHCCPRTPRCFLNHRNKFMRFGPTWGSTLVGHSQTPTPRR
        MRGGGDDRHQNA+AECKQLANSILMENDSHCCPRTPRCFLNHRNKFMRFGPTWGS LVGHSQTPTPRR
Subjt:  MRGGGDDRHQNADAECKQLANSILMENDSHCCPRTPRCFLNHRNKFMRFGPTWGSTLVGHSQTPTPRR

KAG7032174.1 Tetratricopeptide repeat protein 38, partial [Cucurbita argyrosperma subsp. argyrosperma]2.6e-3297.01Show/hide
Query:  MRGGGDDRHQNADAECKQLANSILMENDSHCCPRTPRCFLNHRNKFMRFGPTWGSTLVGHSQTPTPR
        MRGGGDDRHQNA+AECKQLANSILMENDSHCCPRTPRCFLNHRNKFMRFGPTWGS LVGHSQTPTPR
Subjt:  MRGGGDDRHQNADAECKQLANSILMENDSHCCPRTPRCFLNHRNKFMRFGPTWGSTLVGHSQTPTPR

XP_022990897.1 uncharacterized protein LOC111487647 [Cucurbita maxima]5.1e-5782.35Show/hide
Query:  DRKSFRKRRRKLIGKWWFEHLMTKPSRDPAGRSRTNAAAIHPVDSI-------------EGK--RWEMRGGGDDRHQNADAECKQLANSILMENDSHCCP
        D+K FRKRRRKL+GKWWFEHLMTK SRDPAGRSRTNAAA+HP DSI             EGK  RWEMRGGGDDRHQNA A CKQLANSILMENDSHCCP
Subjt:  DRKSFRKRRRKLIGKWWFEHLMTKPSRDPAGRSRTNAAAIHPVDSI-------------EGK--RWEMRGGGDDRHQNADAECKQLANSILMENDSHCCP

Query:  RTPRCFLNHRNKFMRFGPTWGSTLVGHSQTPTPRRK
        RTPRCFLNHRNKFMRFGPTWG TLVGHSQTPTPRRK
Subjt:  RTPRCFLNHRNKFMRFGPTWGSTLVGHSQTPTPRRK

TrEMBL top hitse value%identityAlignment
A0A6J1JK60 uncharacterized protein LOC1114876472.5e-5782.35Show/hide
Query:  DRKSFRKRRRKLIGKWWFEHLMTKPSRDPAGRSRTNAAAIHPVDSI-------------EGK--RWEMRGGGDDRHQNADAECKQLANSILMENDSHCCP
        D+K FRKRRRKL+GKWWFEHLMTK SRDPAGRSRTNAAA+HP DSI             EGK  RWEMRGGGDDRHQNA A CKQLANSILMENDSHCCP
Subjt:  DRKSFRKRRRKLIGKWWFEHLMTKPSRDPAGRSRTNAAAIHPVDSI-------------EGK--RWEMRGGGDDRHQNADAECKQLANSILMENDSHCCP

Query:  RTPRCFLNHRNKFMRFGPTWGSTLVGHSQTPTPRRK
        RTPRCFLNHRNKFMRFGPTWG TLVGHSQTPTPRRK
Subjt:  RTPRCFLNHRNKFMRFGPTWGSTLVGHSQTPTPRRK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCGAAAGAGCTTTAGAAAGAGGCGCCGGAAACTGATCGGAAAGTGGTGGTTTGAACATTTGATGACGAAACCCTCAAGAGATCCGGCCGGACGTAGCAGA
ACGAACGCCGCAGCCATTCATCCAGTGGATTCGATAGAGGGGAAGAGGTGGGAGATGCGTGGAGGAGGCGATGATCGGCATCAGAACGCAGATGCTGAATGTAAG
CAATTAGCAAATTCTATATTAATGGAAAACGACAGCCATTGTTGTCCTCGCACGCCCCGTTGCTTCCTTAATCATCGTAATAAATTTATGCGATTTGGACCGACA
TGGGGTTCGACTTTGGTTGGGCACTCTCAGACACCAACACCACGTCGTAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATCGAAAGAGCTTTAGAAAGAGGCGCCGGAAACTGATCGGAAAGTGGTGGTTTGAACATTTGATGACGAAACCCTCAAGAGATCCGGCCGGACGTAGCAGA
ACGAACGCCGCAGCCATTCATCCAGTGGATTCGATAGAGGGGAAGAGGTGGGAGATGCGTGGAGGAGGCGATGATCGGCATCAGAACGCAGATGCTGAATGTAAG
CAATTAGCAAATTCTATATTAATGGAAAACGACAGCCATTGTTGTCCTCGCACGCCCCGTTGCTTCCTTAATCATCGTAATAAATTTATGCGATTTGGACCGACA
TGGGGTTCGACTTTGGTTGGGCACTCTCAGACACCAACACCACGTCGTAAGTGA
Protein sequenceShow/hide protein sequence
MDRKSFRKRRRKLIGKWWFEHLMTKPSRDPAGRSRTNAAAIHPVDSIEGKRWEMRGGGDDRHQNADAECKQLANSILMENDSHCCPRTPRCFLNHRNKFMRFGPT
WGSTLVGHSQTPTPRRK