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CmoCh04G017550 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G017550
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionGCK domain-containing protein
Genome locationCmo_Chr04:8857480..8857941
RNA-Seq ExpressionCmoCh04G017550
SyntenyCmoCh04G017550
Gene Ontology termsGO:0006414 - translational elongation (biological process)
GO:0003746 - translation elongation factor activity (molecular function)
InterPro domainsIPR012891 - GCK


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601449.1 hypothetical protein SDJN03_06682, partial [Cucurbita argyrosperma subsp. sororia]1.9e-6995.42Show/hide
Query:  MSTSESKLQDAESNAAAAAAAAKTPEDQQQLGAPNHSEEKSPEESGQSGKISESGGEDEGGEDLDEEEEEECGFCLFMKGGGCRDSFVEWEKCIEEAEKN
        MSTS SK QDAESN   AAAAAK+PEDQQQLGAPNHSEEKSPEESGQSGKISESGGEDEGGEDLDEEEE ECGFCLFMKGGGCRDSFVEWEKCIEEAEKN
Subjt:  MSTSESKLQDAESNAAAAAAAAKTPEDQQQLGAPNHSEEKSPEESGQSGKISESGGEDEGGEDLDEEEEEECGFCLFMKGGGCRDSFVEWEKCIEEAEKN

Query:  KEDIVEKCFEITGALKKCMEAHADYYEPILKAEKMAENEAIIELEKESTPNAT
        KEDIVEKCFEITGALKKCMEAHADYYEPILKAEKMAENEAIIELEKESTPNAT
Subjt:  KEDIVEKCFEITGALKKCMEAHADYYEPILKAEKMAENEAIIELEKESTPNAT

KAG7032232.1 hypothetical protein SDJN02_06275, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-6995.42Show/hide
Query:  MSTSESKLQDAESNAAAAAAAAKTPEDQQQLGAPNHSEEKSPEESGQSGKISESGGEDEGGEDLDEEEEEECGFCLFMKGGGCRDSFVEWEKCIEEAEKN
        MSTS SK QDAESN   AAAAAK+PEDQQQLGAPNHSEEKSPEESGQSGKISESGGEDEGGEDLDEEEE ECGFCLFMKGGGCRDSFVEWEKCIEEAEKN
Subjt:  MSTSESKLQDAESNAAAAAAAAKTPEDQQQLGAPNHSEEKSPEESGQSGKISESGGEDEGGEDLDEEEEEECGFCLFMKGGGCRDSFVEWEKCIEEAEKN

Query:  KEDIVEKCFEITGALKKCMEAHADYYEPILKAEKMAENEAIIELEKESTPNAT
        KEDIVEKCFEITGALKKCMEAHADYYEPILKAEKMAENEAIIELEKESTPNAT
Subjt:  KEDIVEKCFEITGALKKCMEAHADYYEPILKAEKMAENEAIIELEKESTPNAT

XP_022957551.1 transcription elongation factor spt5 [Cucurbita moschata]6.8e-75100Show/hide
Query:  MSTSESKLQDAESNAAAAAAAAKTPEDQQQLGAPNHSEEKSPEESGQSGKISESGGEDEGGEDLDEEEEEECGFCLFMKGGGCRDSFVEWEKCIEEAEKN
        MSTSESKLQDAESNAAAAAAAAKTPEDQQQLGAPNHSEEKSPEESGQSGKISESGGEDEGGEDLDEEEEEECGFCLFMKGGGCRDSFVEWEKCIEEAEKN
Subjt:  MSTSESKLQDAESNAAAAAAAAKTPEDQQQLGAPNHSEEKSPEESGQSGKISESGGEDEGGEDLDEEEEEECGFCLFMKGGGCRDSFVEWEKCIEEAEKN

Query:  KEDIVEKCFEITGALKKCMEAHADYYEPILKAEKMAENEAIIELEKESTPNAT
        KEDIVEKCFEITGALKKCMEAHADYYEPILKAEKMAENEAIIELEKESTPNAT
Subjt:  KEDIVEKCFEITGALKKCMEAHADYYEPILKAEKMAENEAIIELEKESTPNAT

XP_022997117.1 uncharacterized protein LOC111492108 [Cucurbita maxima]2.3e-7096.08Show/hide
Query:  MSTSESKLQDAESNAAAAAAAAKTPEDQQQLGAPNHSEEKSPEESGQSGKISESGGEDEGGEDLDEEEEEECGFCLFMKGGGCRDSFVEWEKCIEEAEKN
        MSTSESKLQDAESN  AAAAAAKTPEDQQQLGAPNHSEEKSP+ES QSGKISESGGEDEGGEDLDEEEE ECGFCLFMKGGGCRDSFVEWEKCIEEAEKN
Subjt:  MSTSESKLQDAESNAAAAAAAAKTPEDQQQLGAPNHSEEKSPEESGQSGKISESGGEDEGGEDLDEEEEEECGFCLFMKGGGCRDSFVEWEKCIEEAEKN

Query:  KEDIVEKCFEITGALKKCMEAHADYYEPILKAEKMAENEAIIELEKESTPNAT
        KEDIVEKCFE+TGALKKCMEAHADYYEPILKAEKMAENEAIIELEKESTPNAT
Subjt:  KEDIVEKCFEITGALKKCMEAHADYYEPILKAEKMAENEAIIELEKESTPNAT

XP_023536143.1 uncharacterized protein LOC111797387 [Cucurbita pepo subsp. pepo]5.1e-7095.42Show/hide
Query:  MSTSESKLQDAESNAAAAAAAAKTPEDQQQLGAPNHSEEKSPEESGQSGKISESGGEDEGGEDLDEEEEEECGFCLFMKGGGCRDSFVEWEKCIEEAEKN
        MSTSESKLQDAESN   AAAA KTPEDQQQLGAPNHSEEKSPEESGQSGKIS SGGEDEGGEDLDEEEE ECGFCLFMKGGGCRDSFVEWEKCIEEAEKN
Subjt:  MSTSESKLQDAESNAAAAAAAAKTPEDQQQLGAPNHSEEKSPEESGQSGKISESGGEDEGGEDLDEEEEEECGFCLFMKGGGCRDSFVEWEKCIEEAEKN

Query:  KEDIVEKCFEITGALKKCMEAHADYYEPILKAEKMAENEAIIELEKESTPNAT
        KEDIVEKCFE+TGALKKCMEAHADYYEPILKAEKMAENEAIIELEKESTPNAT
Subjt:  KEDIVEKCFEITGALKKCMEAHADYYEPILKAEKMAENEAIIELEKESTPNAT

TrEMBL top hitse value%identityAlignment
A0A0A0KU46 GCK domain-containing protein2.1e-5882.35Show/hide
Query:  MSTSESKLQDAESNAAAAAAAAKTPEDQQQLGAPNHSEEKSPEESGQSGKISESGGEDEGGEDLDEEEEEECGFCLFMKGGGCRDSFVEWEKCIEEAEKN
        MSTSESKLQDAESN    AAA KT EDQ Q   PN+SEEKS EE+  SGKISESGG DEGGED++EEEE ECGFCLFMKGGGCRDSF+ WEKCIEEAEKN
Subjt:  MSTSESKLQDAESNAAAAAAAAKTPEDQQQLGAPNHSEEKSPEESGQSGKISESGGEDEGGEDLDEEEEEECGFCLFMKGGGCRDSFVEWEKCIEEAEKN

Query:  KEDIVEKCFEITGALKKCMEAHADYYEPILKAEKMAENEAIIELEKESTPNAT
        KEDIVEKCFE+TGALKKCMEAH DYYEPILKAEKMAE EAIIELEKE+TP+A+
Subjt:  KEDIVEKCFEITGALKKCMEAHADYYEPILKAEKMAENEAIIELEKESTPNAT

A0A1S3BFM8 transcription elongation factor spt5-like1.3e-5578.98Show/hide
Query:  MSTSESKLQDAESNAAAAAAAAKTPEDQQQLGAPNHSEEKSPEESGQSGKISESGGEDEGGEDLDEEEEE----ECGFCLFMKGGGCRDSFVEWEKCIEE
        MSTSESKLQDAESN    AAA+KT EDQ Q  + +HS+EKS EE+  SGKISESGG DEGGED++EEEEE    ECGFCLFMKGGGCRDSF+ WEKCIEE
Subjt:  MSTSESKLQDAESNAAAAAAAAKTPEDQQQLGAPNHSEEKSPEESGQSGKISESGGEDEGGEDLDEEEEE----ECGFCLFMKGGGCRDSFVEWEKCIEE

Query:  AEKNKEDIVEKCFEITGALKKCMEAHADYYEPILKAEKMAENEAIIELEKESTPNAT
        AEKNKEDIVEKCFE+TGALKKCMEAH DYYEPILKAEKMAE EAIIELEKE  P+A+
Subjt:  AEKNKEDIVEKCFEITGALKKCMEAHADYYEPILKAEKMAENEAIIELEKESTPNAT

A0A5A7SVC8 Transcription elongation factor spt5-like1.3e-5578.98Show/hide
Query:  MSTSESKLQDAESNAAAAAAAAKTPEDQQQLGAPNHSEEKSPEESGQSGKISESGGEDEGGEDLDEEEEE----ECGFCLFMKGGGCRDSFVEWEKCIEE
        MSTSESKLQDAESN    AAA+KT EDQ Q  + +HS+EKS EE+  SGKISESGG DEGGED++EEEEE    ECGFCLFMKGGGCRDSF+ WEKCIEE
Subjt:  MSTSESKLQDAESNAAAAAAAAKTPEDQQQLGAPNHSEEKSPEESGQSGKISESGGEDEGGEDLDEEEEE----ECGFCLFMKGGGCRDSFVEWEKCIEE

Query:  AEKNKEDIVEKCFEITGALKKCMEAHADYYEPILKAEKMAENEAIIELEKESTPNAT
        AEKNKEDIVEKCFE+TGALKKCMEAH DYYEPILKAEKMAE EAIIELEKE  P+A+
Subjt:  AEKNKEDIVEKCFEITGALKKCMEAHADYYEPILKAEKMAENEAIIELEKESTPNAT

A0A6J1GZI9 transcription elongation factor spt53.3e-75100Show/hide
Query:  MSTSESKLQDAESNAAAAAAAAKTPEDQQQLGAPNHSEEKSPEESGQSGKISESGGEDEGGEDLDEEEEEECGFCLFMKGGGCRDSFVEWEKCIEEAEKN
        MSTSESKLQDAESNAAAAAAAAKTPEDQQQLGAPNHSEEKSPEESGQSGKISESGGEDEGGEDLDEEEEEECGFCLFMKGGGCRDSFVEWEKCIEEAEKN
Subjt:  MSTSESKLQDAESNAAAAAAAAKTPEDQQQLGAPNHSEEKSPEESGQSGKISESGGEDEGGEDLDEEEEEECGFCLFMKGGGCRDSFVEWEKCIEEAEKN

Query:  KEDIVEKCFEITGALKKCMEAHADYYEPILKAEKMAENEAIIELEKESTPNAT
        KEDIVEKCFEITGALKKCMEAHADYYEPILKAEKMAENEAIIELEKESTPNAT
Subjt:  KEDIVEKCFEITGALKKCMEAHADYYEPILKAEKMAENEAIIELEKESTPNAT

A0A6J1K434 uncharacterized protein LOC1114921081.1e-7096.08Show/hide
Query:  MSTSESKLQDAESNAAAAAAAAKTPEDQQQLGAPNHSEEKSPEESGQSGKISESGGEDEGGEDLDEEEEEECGFCLFMKGGGCRDSFVEWEKCIEEAEKN
        MSTSESKLQDAESN  AAAAAAKTPEDQQQLGAPNHSEEKSP+ES QSGKISESGGEDEGGEDLDEEEE ECGFCLFMKGGGCRDSFVEWEKCIEEAEKN
Subjt:  MSTSESKLQDAESNAAAAAAAAKTPEDQQQLGAPNHSEEKSPEESGQSGKISESGGEDEGGEDLDEEEEEECGFCLFMKGGGCRDSFVEWEKCIEEAEKN

Query:  KEDIVEKCFEITGALKKCMEAHADYYEPILKAEKMAENEAIIELEKESTPNAT
        KEDIVEKCFE+TGALKKCMEAHADYYEPILKAEKMAENEAIIELEKESTPNAT
Subjt:  KEDIVEKCFEITGALKKCMEAHADYYEPILKAEKMAENEAIIELEKESTPNAT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G14048.1 GCK domain-containing protein4.2e-0634.07Show/hide
Query:  GEDEGGEDLDEEEEEECGFCLFMKGGGCRDSFVEWEKCIEEAEKNKEDIVEKCFEITGALKKCME-AHADYYEPILKAEKMAENEAIIELE
        GE     ++ EEEE+   F  FM+GGGC++ F +WE C +EA             +   + KCM     D+Y P L A+K A+     EL+
Subjt:  GEDEGGEDLDEEEEEECGFCLFMKGGGCRDSFVEWEKCIEEAEKNKEDIVEKCFEITGALKKCME-AHADYYEPILKAEKMAENEAIIELE

AT1G14060.1 GCK domain-containing protein4.6e-2951.68Show/hide
Query:  SESKLQDAESNAAAAA-----AAAKTPEDQQQLGAPNHSEEKSPEESGQSGKISESGGEDEGGEDLDEEEEEECGFCLFMKGGGCRDSFVEWEKCIEEAE
        S+ K Q+ E    A +     A+  TP   ++LG  + +  + PE+S      S+   E+ GG D D EEE ECGFCLFMKGGGC+DSFV WE+C+E AE
Subjt:  SESKLQDAESNAAAAA-----AAAKTPEDQQQLGAPNHSEEKSPEESGQSGKISESGGEDEGGEDLDEEEEEECGFCLFMKGGGCRDSFVEWEKCIEEAE

Query:  KNKEDIVEKCFEITGALKKCMEAHADYYEPILKAEKMAENEAIIELEKE
        KNKEDIV  C E+T  LKKCM+ H+DYY+PIL AEK AE E   ELE E
Subjt:  KNKEDIVEKCFEITGALKKCMEAHADYYEPILKAEKMAENEAIIELEKE

AT5G02210.1 GCK domain-containing protein3.2e-1451.69Show/hide
Query:  LDE-EEEEECGFCLFMKGGGCRDSFVEW-EKC---IEEAEKNKEDIVEKCFEITGALKKCMEAHADYYEPILKAEKMAENEAIIELEKE
        LDE  EEE+  F  FMKGGGC++SF  W + C    EEAEKNK D+V KC  + G   KCM+ H+DYY PIL  +K  E      LEKE
Subjt:  LDE-EEEEECGFCLFMKGGGCRDSFVEW-EKC---IEEAEKNKEDIVEKCFEITGALKKCMEAHADYYEPILKAEKMAENEAIIELEKE

AT5G57570.1 GCK domain-containing protein9.0e-0934.43Show/hide
Query:  AAAAAAAKTPEDQQQLGAPNHSEEKSPEESGQSGKISESGGEDEGGEDLDEEEEEECGFCLFMKGGGCRDSFVEWEKCIEEAEKN-KEDIVEKCFEITGA
        A++ + A + ED      P+ ++ +   +  +S  + E   E   G+  +EEE  EC  C F+KGG C++SF+  E+C++EAE++ +E    KC E+   
Subjt:  AAAAAAAKTPEDQQQLGAPNHSEEKSPEESGQSGKISESGGEDEGGEDLDEEEEEECGFCLFMKGGGCRDSFVEWEKCIEEAEKN-KEDIVEKCFEITGA

Query:  LKKCMEAHADYYEPILKAEKMA
         K CM  +  YYEPIL  E  A
Subjt:  LKKCMEAHADYYEPILKAEKMA

AT5G57640.1 GCK domain-containing protein1.6e-1340.46Show/hide
Query:  EDQQQLGAPNHSEEKSPEESGQSGKISESGGEDEG---GEDLDEEEEE--ECGFCLFMKGGGCRDSFVEWEKCIEEAEKNKEDIVEKCFEITGALKKCME
        EDQ+ +       E   +       I + G E+E     EDLDE EEE  EC  C F+KGG C+++F E E C +EA+KN ED V KC E     K CM 
Subjt:  EDQQQLGAPNHSEEKSPEESGQSGKISESGGEDEG---GEDLDEEEEE--ECGFCLFMKGGGCRDSFVEWEKCIEEAEKNKEDIVEKCFEITGALKKCME

Query:  AHADYYEPILKAEKMAENEAIIEL---EKES
         +  YYEP+L  E  A  + + EL   EKE+
Subjt:  AHADYYEPILKAEKMAENEAIIEL---EKES


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAACTTCGGAGTCGAAACTCCAAGACGCAGAATCAAACGCCGCCGCCGCCGCCGCCGCCGCTAAAACACCGGAAGATCAACAACAATTGGGCGCCCCAAATCACTC
TGAGGAAAAATCGCCCGAGGAATCAGGTCAATCAGGAAAGATTTCCGAAAGTGGAGGTGAAGATGAAGGAGGAGAGGATCTAGACGAGGAAGAGGAGGAGGAGTGTGGGT
TTTGCTTGTTTATGAAAGGGGGTGGTTGCAGAGATAGCTTCGTAGAATGGGAGAAATGCATTGAGGAGGCGGAGAAGAACAAGGAGGATATTGTGGAGAAGTGCTTTGAA
ATCACTGGGGCTCTGAAGAAATGTATGGAGGCTCATGCGGATTATTACGAGCCGATTCTGAAGGCGGAGAAAATGGCAGAAAACGAGGCGATTATCGAATTGGAGAAGGA
ATCGACTCCAAATGCTACCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCAACTTCGGAGTCGAAACTCCAAGACGCAGAATCAAACGCCGCCGCCGCCGCCGCCGCCGCTAAAACACCGGAAGATCAACAACAATTGGGCGCCCCAAATCACTC
TGAGGAAAAATCGCCCGAGGAATCAGGTCAATCAGGAAAGATTTCCGAAAGTGGAGGTGAAGATGAAGGAGGAGAGGATCTAGACGAGGAAGAGGAGGAGGAGTGTGGGT
TTTGCTTGTTTATGAAAGGGGGTGGTTGCAGAGATAGCTTCGTAGAATGGGAGAAATGCATTGAGGAGGCGGAGAAGAACAAGGAGGATATTGTGGAGAAGTGCTTTGAA
ATCACTGGGGCTCTGAAGAAATGTATGGAGGCTCATGCGGATTATTACGAGCCGATTCTGAAGGCGGAGAAAATGGCAGAAAACGAGGCGATTATCGAATTGGAGAAGGA
ATCGACTCCAAATGCTACCTAG
Protein sequenceShow/hide protein sequence
MSTSESKLQDAESNAAAAAAAAKTPEDQQQLGAPNHSEEKSPEESGQSGKISESGGEDEGGEDLDEEEEEECGFCLFMKGGGCRDSFVEWEKCIEEAEKNKEDIVEKCFE
ITGALKKCMEAHADYYEPILKAEKMAENEAIIELEKESTPNAT