CuGenDBv2

Gene ID	CmoCh04G017770
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Alpha-1,4 glucan phosphorylase
Genome location	Cmo_Chr04:8954364..8956035
RNA-Seq Expression	CmoCh04G017770
Synteny	CmoCh04G017770
Gene Ontology terms	GO:0005980 - glycogen catabolic process (biological process) GO:0005737 - cytoplasm (cellular component) GO:0008184 - glycogen phosphorylase activity (molecular function) GO:0030170 - pyridoxal phosphate binding (molecular function) GO:0102250 - linear malto-oligosaccharide phosphorylase activity (molecular function) GO:0102499 - SHG alpha-glucan phosphorylase activity (molecular function)
InterPro domains	IPR000811 - Glycosyl transferase, family 35

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0034464.1 alpha-1,4 glucan phosphorylase L-2 isozyme [Cucumis melo var. makuwa]

1.3e-17

Show/hide

Query:  KDFRSYIECPDRVDEAYHDQKRWTKMSILNTAGSYKFSSDRTIHEYTRDI
        KDF SYIEC DRVDEAY DQKRWTKMSILNTAGSYKFSSDRTIHEY RDI
Subjt:  KDFRSYIECPDRVDEAYHDQKRWTKMSILNTAGSYKFSSDRTIHEYTRDI

MBA0631936.1 hypothetical protein [Gossypium davidsonii]

2.8e-17

Show/hide

Query:  KDFRSYIECPDRVDEAYHDQKRWTKMSILNTAGSYKFSSDRTIHEYTRDI
        KDF SYIEC D+VDEAY DQKRWTKMSILNTAGSYKFSSDRTIHEY RDI
Subjt:  KDFRSYIECPDRVDEAYHDQKRWTKMSILNTAGSYKFSSDRTIHEYTRDI

PON52341.1 Glycogen/starch/alpha-glucan phosphorylase [Trema orientale]

2.8e-17

Show/hide

Query:  KDFRSYIECPDRVDEAYHDQKRWTKMSILNTAGSYKFSSDRTIHEYTRDI
        KDF SYIEC D+VDEAY DQKRWTKMSILNTAGSYKFSSDRTIHEY RDI
Subjt:  KDFRSYIECPDRVDEAYHDQKRWTKMSILNTAGSYKFSSDRTIHEYTRDI

PON79649.1 Glycogen/starch/alpha-glucan phosphorylase [Parasponia andersonii]

2.8e-17

Show/hide

Query:  KDFRSYIECPDRVDEAYHDQKRWTKMSILNTAGSYKFSSDRTIHEYTRDI
        KDF SYIEC D+VDEAY DQKRWTKMSILNTAGSYKFSSDRTIHEY RDI
Subjt:  KDFRSYIECPDRVDEAYHDQKRWTKMSILNTAGSYKFSSDRTIHEYTRDI

XP_008446425.1 PREDICTED: LOW QUALITY PROTEIN: alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic-like [Cucumis melo]

1.3e-17

Show/hide

Query:  KDFRSYIECPDRVDEAYHDQKRWTKMSILNTAGSYKFSSDRTIHEYTRDI
        KDF SYIEC DRVDEAY DQKRWTKMSILNTAGSYKFSSDRTIHEY RDI
Subjt:  KDFRSYIECPDRVDEAYHDQKRWTKMSILNTAGSYKFSSDRTIHEYTRDI

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BFV4 Alpha-1,4 glucan phosphorylase

6.2e-18

Show/hide

Query:  KDFRSYIECPDRVDEAYHDQKRWTKMSILNTAGSYKFSSDRTIHEYTRDI
        KDF SYIEC DRVDEAY DQKRWTKMSILNTAGSYKFSSDRTIHEY RDI
Subjt:  KDFRSYIECPDRVDEAYHDQKRWTKMSILNTAGSYKFSSDRTIHEYTRDI

A0A2P5E267 Alpha-1,4 glucan phosphorylase

1.4e-17

Show/hide

Query:  KDFRSYIECPDRVDEAYHDQKRWTKMSILNTAGSYKFSSDRTIHEYTRDI
        KDF SYIEC D+VDEAY DQKRWTKMSILNTAGSYKFSSDRTIHEY RDI
Subjt:  KDFRSYIECPDRVDEAYHDQKRWTKMSILNTAGSYKFSSDRTIHEYTRDI

A0A5A7STC5 Alpha-1,4 glucan phosphorylase

6.2e-18

Show/hide

Query:  KDFRSYIECPDRVDEAYHDQKRWTKMSILNTAGSYKFSSDRTIHEYTRDI
        KDF SYIEC DRVDEAY DQKRWTKMSILNTAGSYKFSSDRTIHEY RDI
Subjt:  KDFRSYIECPDRVDEAYHDQKRWTKMSILNTAGSYKFSSDRTIHEYTRDI

A0A5D2HUQ2 Alpha-1,4 glucan phosphorylase

1.4e-17

Show/hide

Query:  KDFRSYIECPDRVDEAYHDQKRWTKMSILNTAGSYKFSSDRTIHEYTRDI
        KDF SYIEC D+VDEAY DQKRWTKMSILNTAGSYKFSSDRTIHEY RDI
Subjt:  KDFRSYIECPDRVDEAYHDQKRWTKMSILNTAGSYKFSSDRTIHEYTRDI

A0A7J9CTA8 Alpha-1,4 glucan phosphorylase

1.4e-17

Show/hide

Query:  KDFRSYIECPDRVDEAYHDQKRWTKMSILNTAGSYKFSSDRTIHEYTRDI
        KDF SYIEC D+VDEAY DQKRWTKMSILNTAGSYKFSSDRTIHEY RDI
Subjt:  KDFRSYIECPDRVDEAYHDQKRWTKMSILNTAGSYKFSSDRTIHEYTRDI

SwissProt top hits

e value

%identity

Alignment

P04045 Alpha-1,4 glucan phosphorylase L-1 isozyme, chloroplastic/amyloplastic

1.2e-18

Show/hide

Query:  KDFRSYIECPDRVDEAYHDQKRWTKMSILNTAGSYKFSSDRTIHEYTRDI
        KDF SYIEC ++VDEAY DQKRWT MSILNTAGSYKFSSDRTIHEY +DI
Subjt:  KDFRSYIECPDRVDEAYHDQKRWTKMSILNTAGSYKFSSDRTIHEYTRDI

P27598 Alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic

4.5e-18

Show/hide

Query:  KDFRSYIECPDRVDEAYHDQKRWTKMSILNTAGSYKFSSDRTIHEYTRDI
        KDF SYIEC ++VDEAY DQK WT+MSILNTAGSYKFSSDRTIHEY +DI
Subjt:  KDFRSYIECPDRVDEAYHDQKRWTKMSILNTAGSYKFSSDRTIHEYTRDI

P53535 Alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic

1.6e-18

Show/hide

Query:  KDFRSYIECPDRVDEAYHDQKRWTKMSILNTAGSYKFSSDRTIHEYTRDI
        KDF  YIEC D+VDEAY DQK+WTKMSILNTAGS+KFSSDRTIH+Y RDI
Subjt:  KDFRSYIECPDRVDEAYHDQKRWTKMSILNTAGSYKFSSDRTIHEYTRDI

P53536 Alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic

4.3e-16

Show/hide

Query:  KDFRSYIECPDRVDEAYHDQKRWTKMSILNTAGSYKFSSDRTIHEYTRDI
        +DF SY+EC + VD+AY DQK+WT+MSILNTAGS KFSSDRTIHEY R+I
Subjt:  KDFRSYIECPDRVDEAYHDQKRWTKMSILNTAGSYKFSSDRTIHEYTRDI

Q9LIB2 Alpha-glucan phosphorylase 1

2.7e-18

Show/hide

Query:  KDFRSYIECPDRVDEAYHDQKRWTKMSILNTAGSYKFSSDRTIHEYTRDI
        KDF SYIEC ++VDEAY DQKRWT+MSI+NTAGS+KFSSDRTIHEY +DI
Subjt:  KDFRSYIECPDRVDEAYHDQKRWTKMSILNTAGSYKFSSDRTIHEYTRDI

Arabidopsis top hits

e value

%identity

Alignment

AT3G29320.1 Glycosyl transferase, family 35

1.9e-19

Show/hide

Query:  KDFRSYIECPDRVDEAYHDQKRWTKMSILNTAGSYKFSSDRTIHEYTRDI
        KDF SYIEC ++VDEAY DQKRWT+MSI+NTAGS+KFSSDRTIHEY +DI
Subjt:  KDFRSYIECPDRVDEAYHDQKRWTKMSILNTAGSYKFSSDRTIHEYTRDI

AT3G46970.1 alpha-glucan phosphorylase 2

6.5e-12

63.27

Show/hide

Query:  DFRSYIECPDRVDEAYHDQKRWTKMSILNTAGSYKFSSDRTIHEYTRDI
        DF SY++   +VDEAY D+K W KMSIL+TAGS KFSSDRTI +Y ++I
Subjt:  DFRSYIECPDRVDEAYHDQKRWTKMSILNTAGSYKFSSDRTIHEYTRDI

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCATACTGATTGGAAGATTGGATGGGCGCATGAAATTGCTGGAGAGCTAAAGGACTTCCGTAGTTACATAGAGTGCCCAGACAGGGTTGATGAGGCCTATCATGATCA
AAAGAGATGGACCAAGATGTCGATCTTAAACACAGCTGGTTCATACAAGTTCAGCAGTGACAGAACCATTCATGAGTATACAAGAGATATATAA

mRNA sequence

Show/hide mRNA sequence

ATGAAAAAAAAGAAAAAAGGAAATAGAAAATTCAAGAAAAACCAAGACGTTTGGCCTCCGTCTCCCGCGCTCCATTAGCCTGCCAGTGTTCATGTTGCTCCACAAAAGTT
GAAACAAATGATGATTGTAGAAATTTTGAATTACCAGACTCGGTAATGGAGCTGCTAGTAAAATCAGCGGCGGAGTCTGTGGCTGACCTCGACGAGGAATCGTTACCTGC
TGAAGAAGGAGACGAGTCTGCACACTGCTCGTTCCTGGCGGTGATCCATCCCAGCATATCAGCACGGCTGGAATAGAGGCCAGTGGAACCAGTAACATGAAGTTTGCTAC
GGATGGATGCATACTGATTGGAAGATTGGATGGGCGCATGAAATTGCTGGAGAGCTAAAGGACTTCCGTAGTTACATAGAGTGCCCAGACAGGGTTGATGAGGCCTATCA
TGATCAAAAGAGATGGACCAAGATGTCGATCTTAAACACAGCTGGTTCATACAAGTTCAGCAGTGACAGAACCATTCATGAGTATACAAGAGATATATAA

Protein sequence

Show/hide protein sequence

MHTDWKIGWAHEIAGELKDFRSYIECPDRVDEAYHDQKRWTKMSILNTAGSYKFSSDRTIHEYTRDI

CmoCh04G017770 (gene) of Cucurbita moschata (Rifu) v1 genome